RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 IGSF1Q8N6C5 1336 aa33.49■■■□□ 2.95
CDKN3-202ENST00000335183 GOLGB1Q14789 3259 aaKnown RBP33.48■■■□□ 2.95
CDKN3-202ENST00000335183 PLEKHG2Q9H7P9 1386 aa33.46■■■□□ 2.95
CDKN3-202ENST00000335183 PLEKHO1Q53GL0 409 aaPredicted RBP33.43■■■□□ 2.94
CDKN3-202ENST00000335183 WWC3Q9ULE0 1092 aa33.43■■■□□ 2.94
CDKN3-202ENST00000335183 HSP90AB1P08238 724 aaKnown RBP33.41■■■□□ 2.94
CDKN3-202ENST00000335183 MORC1Q86VD1 984 aa33.41■■■□□ 2.94
CDKN3-202ENST00000335183 RBM42Q9BTD8 480 aaKnown RBP33.41■■■□□ 2.94
CDKN3-202ENST00000335183 KDRP35968 1356 aa33.4■■■□□ 2.94
CDKN3-202ENST00000335183 ERVV-2B6SEH9 535 aa33.4■■■□□ 2.94
CDKN3-202ENST00000335183 ZNF530Q6P9A1 599 aaPredicted RBP33.4■■■□□ 2.94
CDKN3-202ENST00000335183 DCAF5Q96JK2 942 aa33.4■■■□□ 2.94
CDKN3-202ENST00000335183 ZNF831Q5JPB2 1677 aa33.39■■■□□ 2.94
CDKN3-202ENST00000335183 CCER1Q8TC90 406 aaPredicted RBP33.39■■■□□ 2.94
CDKN3-202ENST00000335183 COL5A3P25940 1745 aaPredicted RBP33.39■■■□□ 2.94
CDKN3-202ENST00000335183 ATP10DQ9P241 1426 aa33.37■■■□□ 2.93
CDKN3-202ENST00000335183 KDM6AO15550 1401 aaPredicted RBP33.36■■■□□ 2.93
CDKN3-202ENST00000335183 AMOTQ4VCS5 1084 aa33.36■■■□□ 2.93
CDKN3-202ENST00000335183 SLC4A9Q96Q91 983 aa33.36■■■□□ 2.93
CDKN3-202ENST00000335183 RTCBQ9Y3I0 505 aaKnown RBP33.36■■■□□ 2.93
CDKN3-202ENST00000335183 AEBP1Q8IUX7 1158 aa33.35■■■□□ 2.93
CDKN3-202ENST00000335183 CABP4P57796 275 aa33.34■■■□□ 2.93
CDKN3-202ENST00000335183 TRAPPC3LQ5T215 181 aa33.34■■■□□ 2.93
CDKN3-202ENST00000335183 KNSTRNQ9Y448 316 aa33.34■■■□□ 2.93
CDKN3-202ENST00000335183 MMP10P09238 476 aa33.33■■■□□ 2.93
CDKN3-202ENST00000335183 C1orf141Q5JVX7 400 aa33.32■■■□□ 2.92
CDKN3-202ENST00000335183 KIF13BQ9NQT8 1826 aa33.31■■■□□ 2.92
CDKN3-202ENST00000335183 MTHFSP49914 203 aa33.31■■■□□ 2.92
CDKN3-202ENST00000335183 MYH14Q7Z406 1995 aaKnown RBP33.3■■■□□ 2.92
CDKN3-202ENST00000335183 N4BP2Q86UW6 1770 aaPredicted RBP33.3■■■□□ 2.92
CDKN3-202ENST00000335183 SULT6B1Q6IMI4 303 aa33.3■■■□□ 2.92
CDKN3-202ENST00000335183 CICQ96RK0 1608 aaPredicted RBP33.3■■■□□ 2.92
CDKN3-202ENST00000335183 C4AP0C0L4 1744 aa33.28■■■□□ 2.92
CDKN3-202ENST00000335183 RC3H1Q5TC82 1133 aaKnown RBP33.28■■■□□ 2.92
CDKN3-202ENST00000335183 CNTNAP4Q9C0A0 1308 aa33.28■■■□□ 2.92
CDKN3-202ENST00000335183 SCN11AQ9UI33 1791 aa33.27■■■□□ 2.92
CDKN3-202ENST00000335183 ARHGEF1Q92888 912 aaKnown RBP33.27■■■□□ 2.92
CDKN3-202ENST00000335183 GPBP1L1Q9HC44 474 aaPredicted RBP33.27■■■□□ 2.92
CDKN3-202ENST00000335183 ADCY9O60503 1353 aa33.26■■■□□ 2.92
CDKN3-202ENST00000335183 KIAA1551Q9HCM1 1747 aa33.26■■■□□ 2.92
CDKN3-202ENST00000335183 NLGN1Q8N2Q7 840 aa33.26■■■□□ 2.91
CDKN3-202ENST00000335183 ZNF526Q8TF50 670 aaPredicted RBP33.26■■■□□ 2.91
CDKN3-202ENST00000335183 PTCD1O75127 700 aaKnown RBP33.25■■■□□ 2.91
CDKN3-202ENST00000335183 ADRA2BP18089 450 aa33.25■■■□□ 2.91
CDKN3-202ENST00000335183 RPS6KA4O75676 772 aa33.24■■■□□ 2.91
CDKN3-202ENST00000335183 RFC4P35249 363 aa33.24■■■□□ 2.91
CDKN3-202ENST00000335183 NFATC2IPQ8NCF5 419 aa33.24■■■□□ 2.91
CDKN3-202ENST00000335183 IL13P35225 146 aa33.23■■■□□ 2.91
CDKN3-202ENST00000335183 PXDNLA1KZ92 1463 aa33.23■■■□□ 2.91
CDKN3-202ENST00000335183 VIRMAQ69YN4 1812 aaKnown RBP33.23■■■□□ 2.91
CDKN3-202ENST00000335183 TJP1Q07157 1748 aa33.21■■■□□ 2.91
CDKN3-202ENST00000335183 GYS1P13807 737 aa33.2■■■□□ 2.91
CDKN3-202ENST00000335183 C10orf71Q711Q0 1435 aa33.19■■■□□ 2.9
CDKN3-202ENST00000335183 TGFB2P61812 414 aa33.18■■■□□ 2.9
CDKN3-202ENST00000335183 AMER1Q5JTC6 1135 aaPredicted RBP33.18■■■□□ 2.9
CDKN3-202ENST00000335183 CCDC87Q9NVE4 849 aa33.18■■■□□ 2.9
CDKN3-202ENST00000335183 A0A0G2JLW4 131 aa33.17■■■□□ 2.9
CDKN3-202ENST00000335183 CRKLP46109 303 aaKnown RBP33.17■■■□□ 2.9
CDKN3-202ENST00000335183 PARP3Q9Y6F1 533 aa33.17■■■□□ 2.9
CDKN3-202ENST00000335183 BCS1LQ9Y276 419 aa33.16■■■□□ 2.9
CDKN3-202ENST00000335183 KIF7Q2M1P5 1343 aa33.16■■■□□ 2.9
CDKN3-202ENST00000335183 BRCA1P38398 1863 aaKnown RBP33.14■■■□□ 2.9
CDKN3-202ENST00000335183 AKAP4Q5JQC9 854 aa33.14■■■□□ 2.9
CDKN3-202ENST00000335183 HMOX1P09601 288 aa33.12■■■□□ 2.89
CDKN3-202ENST00000335183 SRP68Q9UHB9 627 aaKnown RBP33.12■■■□□ 2.89
CDKN3-202ENST00000335183 DPEP1P16444 411 aa33.11■■■□□ 2.89
CDKN3-202ENST00000335183 SLC52A2Q9HAB3 445 aa33.09■■■□□ 2.89
CDKN3-202ENST00000335183 LGR6Q9HBX8 967 aa33.09■■■□□ 2.89
CDKN3-202ENST00000335183 USP42Q9H9J4 1324 aaKnown RBP33.08■■■□□ 2.89
CDKN3-202ENST00000335183 FCHSD2O94868 740 aa33.07■■■□□ 2.88
CDKN3-202ENST00000335183 CC2D1BQ5T0F9 858 aaKnown RBP33.07■■■□□ 2.88
CDKN3-202ENST00000335183 ARFGEF1Q9Y6D6 1849 aa33.07■■■□□ 2.88
CDKN3-202ENST00000335183 FKBP8Q14318 412 aa33.06■■■□□ 2.88
CDKN3-202ENST00000335183 ARHGAP27Q6ZUM4 889 aa33.06■■■□□ 2.88
CDKN3-202ENST00000335183 DNAJC10Q8IXB1 793 aa33.06■■■□□ 2.88
CDKN3-202ENST00000335183 ADAMTS7Q9UKP4 1686 aa33.05■■■□□ 2.88
CDKN3-202ENST00000335183 RNMTO43148 476 aaKnown RBP33.05■■■□□ 2.88
CDKN3-202ENST00000335183 INTS5Q6P9B9 1019 aaKnown RBP33.05■■■□□ 2.88
CDKN3-202ENST00000335183 MRC1P22897 1456 aa33.05■■■□□ 2.88
CDKN3-202ENST00000335183 SLC39A6Q13433 755 aa33.04■■■□□ 2.88
CDKN3-202ENST00000335183 DIAPH1O60610 1272 aaKnown RBP33.03■■■□□ 2.88
CDKN3-202ENST00000335183 DDR1Q08345 913 aa33.02■■■□□ 2.88
CDKN3-202ENST00000335183 PER1O15534 1290 aaPredicted RBP33.01■■■□□ 2.87
CDKN3-202ENST00000335183 MTHFSDQ2M296 383 aaKnown RBP33.01■■■□□ 2.87
CDKN3-202ENST00000335183 KIF3CO14782 793 aa33■■■□□ 2.87
CDKN3-202ENST00000335183 ZPR1O75312 459 aa33■■■□□ 2.87
CDKN3-202ENST00000335183 HSPA6P17066 643 aa33■■■□□ 2.87
CDKN3-202ENST00000335183 CNGB1Q14028 1251 aaPredicted RBP33■■■□□ 2.87
CDKN3-202ENST00000335183 KCPQ6ZWJ8 1503 aa32.99■■■□□ 2.87
CDKN3-202ENST00000335183 KCNA3P22001 575 aa32.99■■■□□ 2.87
CDKN3-202ENST00000335183 USPL1Q5W0Q7 1092 aa32.98■■■□□ 2.87
CDKN3-202ENST00000335183 PIM2Q9P1W9 311 aa32.98■■■□□ 2.87
CDKN3-202ENST00000335183 SOS1Q07889 1333 aaPredicted RBP32.97■■■□□ 2.87
CDKN3-202ENST00000335183 AFDNP55196 1824 aaKnown RBP32.96■■■□□ 2.87
CDKN3-202ENST00000335183 CYP19A1P11511 503 aaPredicted RBP32.96■■■□□ 2.87
CDKN3-202ENST00000335183 POLRMTO00411 1230 aaKnown RBP32.95■■■□□ 2.87
CDKN3-202ENST00000335183 UBR2Q8IWV8 1755 aa32.95■■■□□ 2.87
CDKN3-202ENST00000335183 TM4SF1P30408 202 aa32.93■■■□□ 2.86
CDKN3-202ENST00000335183 CHRNA5P30532 468 aa32.93■■■□□ 2.86
CDKN3-202ENST00000335183 DALRD3Q5D0E6 543 aaKnown RBP32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms