RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 CCDC171Q6TFL3 1326 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 ZSCAN12O43309 604 aa18.71■□□□□ 0.58
SLIT3-201ENST00000332966 WASHC4Q2M389 1173 aa18.71■□□□□ 0.58
SLIT3-201ENST00000332966 TTLL5Q6EMB2 1281 aa18.71■□□□□ 0.58
SLIT3-201ENST00000332966 FAM200AQ8TCP9 573 aa18.7■□□□□ 0.58
SLIT3-201ENST00000332966 KIF20AO95235 890 aa18.7■□□□□ 0.58
SLIT3-201ENST00000332966 PPFIBP1Q86W92 1011 aa18.7■□□□□ 0.58
SLIT3-201ENST00000332966 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
SLIT3-201ENST00000332966 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
SLIT3-201ENST00000332966 AXDND1Q5T1B0 1012 aaPredicted RBP18.69■□□□□ 0.58
SLIT3-201ENST00000332966 DEF6Q9H4E7 631 aa18.69■□□□□ 0.58
SLIT3-201ENST00000332966 GJB2P29033 226 aa18.69■□□□□ 0.58
SLIT3-201ENST00000332966 AACSQ86V21 672 aa18.69■□□□□ 0.58
SLIT3-201ENST00000332966 TRMT1Q9NXH9 659 aaKnown RBP18.69■□□□□ 0.58
SLIT3-201ENST00000332966 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
SLIT3-201ENST00000332966 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
SLIT3-201ENST00000332966 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
SLIT3-201ENST00000332966 MYRIPQ8NFW9 859 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 MRC2Q9UBG0 1479 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 ERICH2A1L162 156 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 URI1O94763 535 aaPredicted RBP18.68■□□□□ 0.58
SLIT3-201ENST00000332966 USP8P40818 1118 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
SLIT3-201ENST00000332966 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
SLIT3-201ENST00000332966 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
SLIT3-201ENST00000332966 INTS4Q96HW7 963 aaKnown RBP18.68■□□□□ 0.58
SLIT3-201ENST00000332966 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
SLIT3-201ENST00000332966 CCDC186Q7Z3E2 898 aa18.67■□□□□ 0.58
SLIT3-201ENST00000332966 GBP3Q9H0R5 595 aa18.67■□□□□ 0.58
SLIT3-201ENST00000332966 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
SLIT3-201ENST00000332966 OGFRQ9NZT2 677 aa18.67■□□□□ 0.58
SLIT3-201ENST00000332966 CNPY2Q9Y2B0 182 aa18.67■□□□□ 0.58
SLIT3-201ENST00000332966 ZNF500O60304 480 aaPredicted RBP18.66■□□□□ 0.58
SLIT3-201ENST00000332966 GTF2F1P35269 517 aaKnown RBP eCLIP18.66■□□□□ 0.58
SLIT3-201ENST00000332966 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 CFAP100Q494V2 611 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 RRS1Q15050 365 aaKnown RBP18.66■□□□□ 0.58
SLIT3-201ENST00000332966 BBXQ8WY36 941 aaPredicted RBP18.66■□□□□ 0.58
SLIT3-201ENST00000332966 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 STX1AQ16623 288 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
SLIT3-201ENST00000332966 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 POLR3GO15318 223 aaPredicted RBP18.65■□□□□ 0.58
SLIT3-201ENST00000332966 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
SLIT3-201ENST00000332966 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 KDM4AO75164 1064 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
SLIT3-201ENST00000332966 PDE1AP54750 535 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
SLIT3-201ENST00000332966 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.58
SLIT3-201ENST00000332966 XBP1P17861 261 aa18.64■□□□□ 0.57
SLIT3-201ENST00000332966 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
SLIT3-201ENST00000332966 PLEKHM2Q8IWE5 1019 aa18.64■□□□□ 0.57
SLIT3-201ENST00000332966 NLRP6P59044 892 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 MCM10Q7L590 875 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 KIAA0754O94854 1291 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 CALRP27797 417 aaKnown RBP18.63■□□□□ 0.57
SLIT3-201ENST00000332966 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 TFIP11Q9UBB9 837 aaKnown RBP18.63■□□□□ 0.57
SLIT3-201ENST00000332966 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
SLIT3-201ENST00000332966 F6X3S4 739 aa18.62■□□□□ 0.57
SLIT3-201ENST00000332966 BRPF1P55201 1214 aaPredicted RBP18.62■□□□□ 0.57
SLIT3-201ENST00000332966 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
SLIT3-201ENST00000332966 F13A1P00488 732 aa18.62■□□□□ 0.57
SLIT3-201ENST00000332966 CEP89Q96ST8 783 aa18.62■□□□□ 0.57
SLIT3-201ENST00000332966 LARP6Q9BRS8 491 aaKnown RBP18.62■□□□□ 0.57
SLIT3-201ENST00000332966 MARCH6O60337 910 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 ZNF397Q8NF99 534 aaPredicted RBP18.61■□□□□ 0.57
SLIT3-201ENST00000332966 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 CASQ1P31415 396 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 SKIDA1Q1XH10 827 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
SLIT3-201ENST00000332966 SKILP12757 684 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 CCDC150Q8NCX0 1101 aa18.61■□□□□ 0.57
SLIT3-201ENST00000332966 LRRFIP2Q9Y608 721 aaKnown RBP18.61■□□□□ 0.57
SLIT3-201ENST00000332966 DNMT1P26358 1616 aaKnown RBP18.6■□□□□ 0.57
SLIT3-201ENST00000332966 GAS2L3Q86XJ1 694 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 ANO6Q4KMQ2 910 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
SLIT3-201ENST00000332966 TXLNBQ8N3L3 684 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 SIL1Q9H173 461 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 TOP1P11387 765 aaKnown RBP18.6■□□□□ 0.57
SLIT3-201ENST00000332966 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 CARD14Q9BXL6 1004 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
SLIT3-201ENST00000332966 SLU7O95391 586 aaKnown RBP18.59■□□□□ 0.57
SLIT3-201ENST00000332966 TUBB4AP04350 444 aa18.59■□□□□ 0.57
SLIT3-201ENST00000332966 MIS18AQ9NYP9 233 aa18.59■□□□□ 0.57
SLIT3-201ENST00000332966 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
SLIT3-201ENST00000332966 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
SLIT3-201ENST00000332966 ZNHIT6Q9NWK9 470 aaKnown RBP18.59■□□□□ 0.57
SLIT3-201ENST00000332966 ATP2B1P20020 1258 aa18.58■□□□□ 0.57
SLIT3-201ENST00000332966 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.57
SLIT3-201ENST00000332966 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms