RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ATG3Q9NT62 314 aa34.32■■■■□ 3.08
PPP4R4-202ENST00000328839 PLEKHG2Q9H7P9 1386 aa34.32■■■■□ 3.08
PPP4R4-202ENST00000328839 PLEKHO1Q53GL0 409 aaPredicted RBP34.29■■■■□ 3.08
PPP4R4-202ENST00000328839 HSP90AB1P08238 724 aaKnown RBP34.27■■■■□ 3.08
PPP4R4-202ENST00000328839 ZNF530Q6P9A1 599 aaPredicted RBP34.27■■■■□ 3.08
PPP4R4-202ENST00000328839 C1QTNF8P60827 252 aa34.26■■■■□ 3.08
PPP4R4-202ENST00000328839 DCAF5Q96JK2 942 aa34.26■■■■□ 3.08
PPP4R4-202ENST00000328839 RBM42Q9BTD8 480 aaKnown RBP34.26■■■■□ 3.08
PPP4R4-202ENST00000328839 ERVV-2B6SEH9 535 aa34.25■■■■□ 3.07
PPP4R4-202ENST00000328839 KNSTRNQ9Y448 316 aa34.25■■■■□ 3.07
PPP4R4-202ENST00000328839 GIGYF1O75420 1035 aaPredicted RBP34.23■■■■□ 3.07
PPP4R4-202ENST00000328839 AEBP1Q8IUX7 1158 aa34.23■■■■□ 3.07
PPP4R4-202ENST00000328839 WWC3Q9ULE0 1092 aa34.23■■■■□ 3.07
PPP4R4-202ENST00000328839 KDRP35968 1356 aa34.23■■■■□ 3.07
PPP4R4-202ENST00000328839 SENP3-EIF4A1A0A087X0R7 540 aa34.22■■■■□ 3.07
PPP4R4-202ENST00000328839 AMOTQ4VCS5 1084 aa34.22■■■■□ 3.07
PPP4R4-202ENST00000328839 KDM6AO15550 1401 aaPredicted RBP34.21■■■■□ 3.07
PPP4R4-202ENST00000328839 CABP4P57796 275 aa34.21■■■■□ 3.07
PPP4R4-202ENST00000328839 ZNF831Q5JPB2 1677 aa34.21■■■■□ 3.07
PPP4R4-202ENST00000328839 COL5A3P25940 1745 aaPredicted RBP34.21■■■■□ 3.07
PPP4R4-202ENST00000328839 C1orf141Q5JVX7 400 aa34.2■■■■□ 3.07
PPP4R4-202ENST00000328839 RTCBQ9Y3I0 505 aaKnown RBP34.19■■■■□ 3.06
PPP4R4-202ENST00000328839 SULT6B1Q6IMI4 303 aa34.18■■■■□ 3.06
PPP4R4-202ENST00000328839 MTHFSP49914 203 aa34.17■■■■□ 3.06
PPP4R4-202ENST00000328839 SLC4A9Q96Q91 983 aa34.17■■■■□ 3.06
PPP4R4-202ENST00000328839 TRAPPC3LQ5T215 181 aa34.16■■■■□ 3.06
PPP4R4-202ENST00000328839 MMP10P09238 476 aa34.15■■■■□ 3.06
PPP4R4-202ENST00000328839 ATP10DQ9P241 1426 aa34.13■■■■□ 3.05
PPP4R4-202ENST00000328839 SCN11AQ9UI33 1791 aa34.11■■■■□ 3.05
PPP4R4-202ENST00000328839 PTCD1O75127 700 aaKnown RBP34.11■■■■□ 3.05
PPP4R4-202ENST00000328839 CICQ96RK0 1608 aaPredicted RBP34.11■■■■□ 3.05
PPP4R4-202ENST00000328839 MYH14Q7Z406 1995 aaKnown RBP34.11■■■■□ 3.05
PPP4R4-202ENST00000328839 CNTNAP4Q9C0A0 1308 aa34.1■■■■□ 3.05
PPP4R4-202ENST00000328839 IL13P35225 146 aa34.1■■■■□ 3.05
PPP4R4-202ENST00000328839 C4AP0C0L4 1744 aa34.1■■■■□ 3.05
PPP4R4-202ENST00000328839 KIF7Q2M1P5 1343 aa34.09■■■■□ 3.05
PPP4R4-202ENST00000328839 RC3H1Q5TC82 1133 aaKnown RBP34.09■■■■□ 3.05
PPP4R4-202ENST00000328839 NFATC2IPQ8NCF5 419 aa34.09■■■■□ 3.05
PPP4R4-202ENST00000328839 KIF13BQ9NQT8 1826 aa34.09■■■■□ 3.05
PPP4R4-202ENST00000328839 N4BP2Q86UW6 1770 aaPredicted RBP34.08■■■■□ 3.05
PPP4R4-202ENST00000328839 AMER1Q5JTC6 1135 aaPredicted RBP34.08■■■■□ 3.05
PPP4R4-202ENST00000328839 ARHGEF1Q92888 912 aaKnown RBP34.08■■■■□ 3.05
PPP4R4-202ENST00000328839 ADRA2BP18089 450 aa34.07■■■■□ 3.04
PPP4R4-202ENST00000328839 RFC4P35249 363 aa34.07■■■■□ 3.04
PPP4R4-202ENST00000328839 NLGN1Q8N2Q7 840 aa34.07■■■■□ 3.04
PPP4R4-202ENST00000328839 VIRMAQ69YN4 1812 aaKnown RBP34.06■■■■□ 3.04
PPP4R4-202ENST00000328839 RPS6KA4O75676 772 aa34.05■■■■□ 3.04
PPP4R4-202ENST00000328839 TJP1Q07157 1748 aa34.04■■■■□ 3.04
PPP4R4-202ENST00000328839 ZNF526Q8TF50 670 aaPredicted RBP34.03■■■■□ 3.04
PPP4R4-202ENST00000328839 GPBP1L1Q9HC44 474 aaPredicted RBP34.03■■■■□ 3.04
PPP4R4-202ENST00000328839 KIAA1551Q9HCM1 1747 aa34.03■■■■□ 3.04
PPP4R4-202ENST00000328839 PXDNLA1KZ92 1463 aa34.02■■■■□ 3.04
PPP4R4-202ENST00000328839 GYS1P13807 737 aa34.01■■■■□ 3.03
PPP4R4-202ENST00000328839 CRKLP46109 303 aaKnown RBP34.01■■■■□ 3.03
PPP4R4-202ENST00000328839 ADCY9O60503 1353 aa34■■■■□ 3.03
PPP4R4-202ENST00000328839 HMOX1P09601 288 aa34■■■■□ 3.03
PPP4R4-202ENST00000328839 AKAP4Q5JQC9 854 aa34■■■■□ 3.03
PPP4R4-202ENST00000328839 CCDC87Q9NVE4 849 aa33.99■■■■□ 3.03
PPP4R4-202ENST00000328839 PARP3Q9Y6F1 533 aa33.99■■■■□ 3.03
PPP4R4-202ENST00000328839 C10orf71Q711Q0 1435 aa33.98■■■■□ 3.03
PPP4R4-202ENST00000328839 CC2D1BQ5T0F9 858 aaKnown RBP33.98■■■■□ 3.03
PPP4R4-202ENST00000328839 TGFB2P61812 414 aa33.97■■■■□ 3.03
PPP4R4-202ENST00000328839 A0A0G2JLW4 131 aa33.96■■■■□ 3.03
PPP4R4-202ENST00000328839 BCS1LQ9Y276 419 aa33.95■■■■□ 3.03
PPP4R4-202ENST00000328839 CNGB1Q14028 1251 aaPredicted RBP33.94■■■■□ 3.02
PPP4R4-202ENST00000328839 SLC52A2Q9HAB3 445 aa33.94■■■■□ 3.02
PPP4R4-202ENST00000328839 LGR6Q9HBX8 967 aa33.94■■■■□ 3.02
PPP4R4-202ENST00000328839 SRP68Q9UHB9 627 aaKnown RBP33.94■■■■□ 3.02
PPP4R4-202ENST00000328839 DIAPH1O60610 1272 aaKnown RBP33.92■■■■□ 3.02
PPP4R4-202ENST00000328839 BRCA1P38398 1863 aaKnown RBP33.91■■■■□ 3.02
PPP4R4-202ENST00000328839 USP42Q9H9J4 1324 aaKnown RBP33.9■■■■□ 3.02
PPP4R4-202ENST00000328839 PER1O15534 1290 aaPredicted RBP33.9■■■■□ 3.02
PPP4R4-202ENST00000328839 RNMTO43148 476 aaKnown RBP33.9■■■■□ 3.02
PPP4R4-202ENST00000328839 DPEP1P16444 411 aa33.9■■■■□ 3.02
PPP4R4-202ENST00000328839 MRC1P22897 1456 aa33.89■■■■□ 3.02
PPP4R4-202ENST00000328839 DNAJC10Q8IXB1 793 aa33.89■■■■□ 3.02
PPP4R4-202ENST00000328839 SLC39A6Q13433 755 aa33.88■■■■□ 3.01
PPP4R4-202ENST00000328839 FKBP8Q14318 412 aa33.88■■■■□ 3.01
PPP4R4-202ENST00000328839 MTHFSDQ2M296 383 aaKnown RBP33.87■■■■□ 3.01
PPP4R4-202ENST00000328839 INTS5Q6P9B9 1019 aaKnown RBP33.87■■■■□ 3.01
PPP4R4-202ENST00000328839 FCHSD2O94868 740 aa33.86■■■■□ 3.01
PPP4R4-202ENST00000328839 ADAMTS7Q9UKP4 1686 aa33.86■■■■□ 3.01
PPP4R4-202ENST00000328839 ARHGAP27Q6ZUM4 889 aa33.85■■■■□ 3.01
PPP4R4-202ENST00000328839 ZPR1O75312 459 aa33.83■■■■□ 3.01
PPP4R4-202ENST00000328839 ARFGEF1Q9Y6D6 1849 aa33.83■■■■□ 3.01
PPP4R4-202ENST00000328839 KCPQ6ZWJ8 1503 aa33.83■■■■□ 3.01
PPP4R4-202ENST00000328839 DDR1Q08345 913 aa33.82■■■■□ 3
PPP4R4-202ENST00000328839 U2SURPO15042 1029 aaKnown RBP33.8■■■■□ 3
PPP4R4-202ENST00000328839 USPL1Q5W0Q7 1092 aa33.8■■■■□ 3
PPP4R4-202ENST00000328839 SOS1Q07889 1333 aaPredicted RBP33.79■■■■□ 3
PPP4R4-202ENST00000328839 CYP19A1P11511 503 aaPredicted RBP33.79■■■■□ 3
PPP4R4-202ENST00000328839 UBR2Q8IWV8 1755 aa33.79■■■■□ 3
PPP4R4-202ENST00000328839 COL3A1P02461 1466 aaPredicted RBP33.78■■■■□ 3
PPP4R4-202ENST00000328839 PIM2Q9P1W9 311 aa33.78■■■■□ 3
PPP4R4-202ENST00000328839 KCNA3P22001 575 aa33.77■■■■□ 3
PPP4R4-202ENST00000328839 COL15A1P39059 1388 aa33.76■■■■□ 3
PPP4R4-202ENST00000328839 POLRMTO00411 1230 aaKnown RBP33.76■■■□□ 2.99
PPP4R4-202ENST00000328839 ZBTB1Q9Y2K1 713 aa33.76■■■□□ 2.99
PPP4R4-202ENST00000328839 NPC1L1Q9UHC9 1359 aa33.75■■■□□ 2.99
PPP4R4-202ENST00000328839 AFDNP55196 1824 aaKnown RBP33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms