RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
CCNC-201ENST00000326298 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
CCNC-201ENST00000326298 MTHFSP49914 203 aa11.12□□□□□ -0.63
CCNC-201ENST00000326298 ZNF530Q6P9A1 599 aaPredicted RBP11.12□□□□□ -0.63
CCNC-201ENST00000326298 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
CCNC-201ENST00000326298 SMARCC1Q92922 1105 aaPredicted RBP11.12□□□□□ -0.63
CCNC-201ENST00000326298 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
CCNC-201ENST00000326298 AK7Q96M32 723 aa11.11□□□□□ -0.63
CCNC-201ENST00000326298 KDRP35968 1356 aa11.11□□□□□ -0.63
CCNC-201ENST00000326298 HMOX1P09601 288 aa11.11□□□□□ -0.63
CCNC-201ENST00000326298 GPR162Q16538 588 aa11.11□□□□□ -0.63
CCNC-201ENST00000326298 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
CCNC-201ENST00000326298 GNPATO15228 680 aa11.1□□□□□ -0.63
CCNC-201ENST00000326298 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
CCNC-201ENST00000326298 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
CCNC-201ENST00000326298 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
CCNC-201ENST00000326298 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
CCNC-201ENST00000326298 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
CCNC-201ENST00000326298 MYH14Q7Z406 1995 aaKnown RBP11.09□□□□□ -0.63
CCNC-201ENST00000326298 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
CCNC-201ENST00000326298 PTCD1O75127 700 aaKnown RBP11.08□□□□□ -0.64
CCNC-201ENST00000326298 CHD4Q14839 1912 aa11.07□□□□□ -0.64
CCNC-201ENST00000326298 CABP4P57796 275 aa11.07□□□□□ -0.64
CCNC-201ENST00000326298 SSFA2P28290 1259 aa11.07□□□□□ -0.64
CCNC-201ENST00000326298 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
CCNC-201ENST00000326298 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
CCNC-201ENST00000326298 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
CCNC-201ENST00000326298 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
CCNC-201ENST00000326298 SLC39A6Q13433 755 aa11.05□□□□□ -0.64
CCNC-201ENST00000326298 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
CCNC-201ENST00000326298 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
CCNC-201ENST00000326298 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
CCNC-201ENST00000326298 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
CCNC-201ENST00000326298 MMP10P09238 476 aa11.04□□□□□ -0.64
CCNC-201ENST00000326298 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
CCNC-201ENST00000326298 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
CCNC-201ENST00000326298 SRP68Q9UHB9 627 aaKnown RBP11.04□□□□□ -0.64
CCNC-201ENST00000326298 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
CCNC-201ENST00000326298 TJP1Q07157 1748 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
CCNC-201ENST00000326298 GYS1P13807 737 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
CCNC-201ENST00000326298 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
CCNC-201ENST00000326298 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 TRAPPC3LQ5T215 181 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
CCNC-201ENST00000326298 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
CCNC-201ENST00000326298 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
CCNC-201ENST00000326298 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
CCNC-201ENST00000326298 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
CCNC-201ENST00000326298 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.65
CCNC-201ENST00000326298 CNTNAP4Q9C0A0 1308 aa11.02□□□□□ -0.65
CCNC-201ENST00000326298 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
CCNC-201ENST00000326298 KIAA1551Q9HCM1 1747 aa11.01□□□□□ -0.65
CCNC-201ENST00000326298 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
CCNC-201ENST00000326298 ADAMTS7Q9UKP4 1686 aa11.01□□□□□ -0.65
CCNC-201ENST00000326298 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
CCNC-201ENST00000326298 RC3H1Q5TC82 1133 aaKnown RBP11.01□□□□□ -0.65
CCNC-201ENST00000326298 A0A0G2JLW4 131 aa11□□□□□ -0.65
CCNC-201ENST00000326298 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
CCNC-201ENST00000326298 FKBP8Q14318 412 aa11□□□□□ -0.65
CCNC-201ENST00000326298 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
CCNC-201ENST00000326298 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
CCNC-201ENST00000326298 NPC1L1Q9UHC9 1359 aa11□□□□□ -0.65
CCNC-201ENST00000326298 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
CCNC-201ENST00000326298 IL17REQ8NFR9 667 aa11□□□□□ -0.65
CCNC-201ENST00000326298 MRC1P22897 1456 aa11□□□□□ -0.65
CCNC-201ENST00000326298 DDR1Q08345 913 aa10.99□□□□□ -0.65
CCNC-201ENST00000326298 RFC4P35249 363 aa10.99□□□□□ -0.65
CCNC-201ENST00000326298 GRIN3BO60391 1043 aa10.98□□□□□ -0.65
CCNC-201ENST00000326298 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
CCNC-201ENST00000326298 ZBTB1Q9Y2K1 713 aa10.98□□□□□ -0.65
CCNC-201ENST00000326298 KCNQ3O43525 872 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 KCNA3P22001 575 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 USP42Q9H9J4 1324 aaKnown RBP10.97□□□□□ -0.65
CCNC-201ENST00000326298 C10orf71Q711Q0 1435 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 KIF13BQ9NQT8 1826 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 DPEP1P16444 411 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 PPP2R1AP30153 589 aa10.97□□□□□ -0.65
CCNC-201ENST00000326298 ADRA2BP18089 450 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 C1QTNF8P60827 252 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 USPL1Q5W0Q7 1092 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
CCNC-201ENST00000326298 ZNF496Q96IT1 587 aaPredicted RBP10.96□□□□□ -0.65
CCNC-201ENST00000326298 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 CCDC87Q9NVE4 849 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 ATP10DQ9P241 1426 aa10.96□□□□□ -0.65
CCNC-201ENST00000326298 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.66
CCNC-201ENST00000326298 PRKAR2BP31323 418 aa10.96□□□□□ -0.66
CCNC-201ENST00000326298 PCNTO95613 3336 aa10.95□□□□□ -0.66
CCNC-201ENST00000326298 ADCY9O60503 1353 aa10.95□□□□□ -0.66
CCNC-201ENST00000326298 HMGB2P26583 209 aaKnown RBP10.95□□□□□ -0.66
CCNC-201ENST00000326298 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
CCNC-201ENST00000326298 PRAMEF22A3QJZ6 481 aa10.94□□□□□ -0.66
CCNC-201ENST00000326298 TM4SF1P30408 202 aa10.94□□□□□ -0.66
CCNC-201ENST00000326298 CHRNA5P30532 468 aa10.94□□□□□ -0.66
CCNC-201ENST00000326298 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms