RNA–Protein interactions for RNA: ENST00000324941.4

VPS37D-201, Transcript of VPS37D, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37D, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-201ENST00000324941 PCDH11YQ9BZA8 1340 aa35.64■■■■□ 3.3
VPS37D-201ENST00000324941 RLBP1P12271 317 aa35.63■■■■□ 3.29
VPS37D-201ENST00000324941 USP35Q9P2H5 1018 aa35.63■■■■□ 3.29
VPS37D-201ENST00000324941 JCADQ9P266 1359 aa35.63■■■■□ 3.29
VPS37D-201ENST00000324941 AAMPQ13685 434 aa35.6■■■■□ 3.29
VPS37D-201ENST00000324941 KDM6AO15550 1401 aaPredicted RBP35.59■■■■□ 3.29
VPS37D-201ENST00000324941 VIRMAQ69YN4 1812 aaKnown RBP35.59■■■■□ 3.29
VPS37D-201ENST00000324941 EIF4A1P60842 406 aaKnown RBP35.59■■■■□ 3.29
VPS37D-201ENST00000324941 MVPQ14764 893 aaKnown RBP35.58■■■■□ 3.29
VPS37D-201ENST00000324941 SLC52A2Q9HAB3 445 aa35.58■■■■□ 3.29
VPS37D-201ENST00000324941 CHMP4AQ9BY43 222 aa35.57■■■■□ 3.28
VPS37D-201ENST00000324941 KDM3BQ7LBC6 1761 aa35.56■■■■□ 3.28
VPS37D-201ENST00000324941 SCN11AQ9UI33 1791 aa35.56■■■■□ 3.28
VPS37D-201ENST00000324941 CCDC30Q5VVM6 783 aa35.56■■■■□ 3.28
VPS37D-201ENST00000324941 API5Q9BZZ5 524 aaKnown RBP35.56■■■■□ 3.28
VPS37D-201ENST00000324941 PLCH1Q4KWH8 1693 aa35.55■■■■□ 3.28
VPS37D-201ENST00000324941 STK31Q9BXU1 1019 aa35.54■■■■□ 3.28
VPS37D-201ENST00000324941 HOXB7P09629 217 aa35.54■■■■□ 3.28
VPS37D-201ENST00000324941 KCNQ3O43525 872 aa35.53■■■■□ 3.28
VPS37D-201ENST00000324941 SLC4A2P04920 1241 aa35.53■■■■□ 3.28
VPS37D-201ENST00000324941 NFATC2IPQ8NCF5 419 aa35.52■■■■□ 3.28
VPS37D-201ENST00000324941 SIPA1L3O60292 1781 aaPredicted RBP35.52■■■■□ 3.28
VPS37D-201ENST00000324941 NKX1-1Q15270 411 aaPredicted RBP35.51■■■■□ 3.28
VPS37D-201ENST00000324941 DDX54Q8TDD1 881 aaKnown RBP35.51■■■■□ 3.28
VPS37D-201ENST00000324941 DDX19BQ9UMR2 479 aa35.51■■■■□ 3.28
VPS37D-201ENST00000324941 CABP4P57796 275 aa35.5■■■■□ 3.27
VPS37D-201ENST00000324941 ITPRIPQ8IWB1 547 aa35.5■■■■□ 3.27
VPS37D-201ENST00000324941 TMEM57Q8N5G2 664 aa35.5■■■■□ 3.27
VPS37D-201ENST00000324941 PTPRCP08575 1304 aa35.49■■■■□ 3.27
VPS37D-201ENST00000324941 SPATA31A6Q5VVP1 1343 aa35.49■■■■□ 3.27
VPS37D-201ENST00000324941 MRC1P22897 1456 aa35.48■■■■□ 3.27
VPS37D-201ENST00000324941 DISP2A7MBM2 1401 aa35.47■■■■□ 3.27
VPS37D-201ENST00000324941 HDGFL1Q5TGJ6 251 aa35.47■■■■□ 3.27
VPS37D-201ENST00000324941 THRAP3Q9Y2W1 955 aaKnown RBP35.47■■■■□ 3.27
VPS37D-201ENST00000324941 ERVV-2B6SEH9 535 aa35.46■■■■□ 3.27
VPS37D-201ENST00000324941 CDCA7Q9BWT1 371 aaPredicted RBP35.46■■■■□ 3.27
VPS37D-201ENST00000324941 NRAPQ86VF7 1730 aa35.46■■■■□ 3.27
VPS37D-201ENST00000324941 SLIT2O94813 1529 aa35.46■■■■□ 3.27
VPS37D-201ENST00000324941 ZNF790Q6PG37 636 aa35.46■■■■□ 3.27
VPS37D-201ENST00000324941 NWD2Q9ULI1 1742 aa35.45■■■■□ 3.27
VPS37D-201ENST00000324941 SPATA31A1Q5TZJ5 1347 aa35.45■■■■□ 3.27
VPS37D-201ENST00000324941 NECTIN2Q92692 538 aa35.44■■■■□ 3.26
VPS37D-201ENST00000324941 ABCC4O15439 1325 aa35.44■■■■□ 3.26
VPS37D-201ENST00000324941 CHMP4BQ9H444 224 aaKnown RBP35.43■■■■□ 3.26
VPS37D-201ENST00000324941 NGLY1Q96IV0 654 aa35.43■■■■□ 3.26
VPS37D-201ENST00000324941 HEG1Q9ULI3 1381 aa35.42■■■■□ 3.26
VPS37D-201ENST00000324941 EXOC5O00471 708 aa35.42■■■■□ 3.26
VPS37D-201ENST00000324941 GIGYF1O75420 1035 aaPredicted RBP35.41■■■■□ 3.26
VPS37D-201ENST00000324941 EIF2S2P20042 333 aaKnown RBP35.41■■■■□ 3.26
VPS37D-201ENST00000324941 TTC5Q8N0Z6 440 aa35.41■■■■□ 3.26
VPS37D-201ENST00000324941 SHANK3Q9BYB0 1731 aa35.4■■■■□ 3.26
VPS37D-201ENST00000324941 HSPA1LP34931 641 aa35.4■■■■□ 3.26
VPS37D-201ENST00000324941 SLC39A6Q13433 755 aa35.4■■■■□ 3.26
VPS37D-201ENST00000324941 C8orf37Q96NL8 207 aa35.4■■■■□ 3.26
VPS37D-201ENST00000324941 SPATA31A5Q5VU36 1347 aa35.39■■■■□ 3.26
VPS37D-201ENST00000324941 SPATA31A7Q8IWB4 1347 aa35.39■■■■□ 3.26
VPS37D-201ENST00000324941 UNC5CLQ8IV45 518 aa35.39■■■■□ 3.26
VPS37D-201ENST00000324941 CCDC9Q9Y3X0 531 aaKnown RBP35.39■■■■□ 3.26
VPS37D-201ENST00000324941 CENPQQ7L2Z9 268 aaPredicted RBP35.38■■■■□ 3.25
VPS37D-201ENST00000324941 G2E3Q7L622 706 aa35.37■■■■□ 3.25
VPS37D-201ENST00000324941 FLIIQ13045 1269 aa35.35■■■■□ 3.25
VPS37D-201ENST00000324941 INTS3Q68E01 1043 aaKnown RBP35.34■■■■□ 3.25
VPS37D-201ENST00000324941 KDM2BQ8NHM5 1336 aa35.33■■■■□ 3.25
VPS37D-201ENST00000324941 FMNL2Q96PY5 1086 aa35.33■■■■□ 3.25
VPS37D-201ENST00000324941 RGS12O14924 1447 aa35.33■■■■□ 3.25
VPS37D-201ENST00000324941 CACNA1FO60840 1977 aa35.33■■■■□ 3.25
VPS37D-201ENST00000324941 BARGINQ6ZT62 677 aa35.32■■■■□ 3.25
VPS37D-201ENST00000324941 FNBP4Q8N3X1 1017 aaPredicted RBP35.32■■■■□ 3.25
VPS37D-201ENST00000324941 ZBTB40Q9NUA8 1239 aa35.32■■■■□ 3.25
VPS37D-201ENST00000324941 WNK3Q9BYP7 1800 aa35.32■■■■□ 3.25
VPS37D-201ENST00000324941 DBF4Q9UBU7 674 aaPredicted RBP35.32■■■■□ 3.24
VPS37D-201ENST00000324941 ZBTB7BO15156 539 aaPredicted RBP35.31■■■■□ 3.24
VPS37D-201ENST00000324941 FKBP5Q13451 457 aaPredicted RBP35.31■■■■□ 3.24
VPS37D-201ENST00000324941 ZNF496Q96IT1 587 aaPredicted RBP35.31■■■■□ 3.24
VPS37D-201ENST00000324941 CHPF2Q9P2E5 772 aa35.31■■■■□ 3.24
VPS37D-201ENST00000324941 PCDHB15Q9Y5E8 787 aa35.31■■■■□ 3.24
VPS37D-201ENST00000324941 TNS2Q63HR2 1409 aa35.3■■■■□ 3.24
VPS37D-201ENST00000324941 SNRPA1P09661 255 aaKnown RBP35.29■■■■□ 3.24
VPS37D-201ENST00000324941 VPS72Q15906 364 aa35.29■■■■□ 3.24
VPS37D-201ENST00000324941 DDB1Q16531 1140 aa35.29■■■■□ 3.24
VPS37D-201ENST00000324941 TMOD3Q9NYL9 352 aa35.28■■■■□ 3.24
VPS37D-201ENST00000324941 LRP6O75581 1613 aa35.28■■■■□ 3.24
VPS37D-201ENST00000324941 MEX3CQ5U5Q3 659 aaKnown RBP35.28■■■■□ 3.24
VPS37D-201ENST00000324941 BCL9LQ86UU0 1499 aa35.27■■■■□ 3.24
VPS37D-201ENST00000324941 PRAMEF22A3QJZ6 481 aa35.27■■■■□ 3.24
VPS37D-201ENST00000324941 RWDD1Q9H446 243 aaPredicted RBP35.27■■■■□ 3.24
VPS37D-201ENST00000324941 IGHDP01880 384 aa35.25■■■■□ 3.23
VPS37D-201ENST00000324941 CCT4P50991 539 aaKnown RBP35.25■■■■□ 3.23
VPS37D-201ENST00000324941 PHAXQ9H814 394 aaKnown RBP35.25■■■■□ 3.23
VPS37D-201ENST00000324941 USP21Q9UK80 565 aa35.24■■■■□ 3.23
VPS37D-201ENST00000324941 SLC4A10Q6U841 1118 aa35.24■■■■□ 3.23
VPS37D-201ENST00000324941 F6X3S4 739 aa35.23■■■■□ 3.23
VPS37D-201ENST00000324941 HYPKQ9NX55 129 aa35.22■■■■□ 3.23
VPS37D-201ENST00000324941 DDX21Q9NR30 783 aaKnown RBP eCLIP35.21■■■■□ 3.23
VPS37D-201ENST00000324941 TOGARAM1Q9Y4F4 1720 aa35.2■■■■□ 3.23
VPS37D-201ENST00000324941 ANXA1P04083 346 aa35.17■■■■□ 3.22
VPS37D-201ENST00000324941 PIGBQ92521 554 aa35.17■■■■□ 3.22
VPS37D-201ENST00000324941 USP16Q9Y5T5 823 aa35.17■■■■□ 3.22
VPS37D-201ENST00000324941 HDAC1Q13547 482 aaPredicted RBP35.16■■■■□ 3.22
VPS37D-201ENST00000324941 FAM98CQ17RN3 349 aaKnown RBP35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms