RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 DCAF5Q96JK2 942 aa27.46■■□□□ 1.99
SERF1A-201ENST00000317633 ATG3Q9NT62 314 aa27.46■■□□□ 1.99
SERF1A-201ENST00000317633 AMIGO3Q86WK7 504 aa27.44■■□□□ 1.98
SERF1A-201ENST00000317633 GNPATO15228 680 aa27.43■■□□□ 1.98
SERF1A-201ENST00000317633 YBX3P16989 372 aaKnown RBP eCLIP27.43■■□□□ 1.98
SERF1A-201ENST00000317633 ITPK1Q13572 414 aa27.43■■□□□ 1.98
SERF1A-201ENST00000317633 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
SERF1A-201ENST00000317633 ZNF831Q5JPB2 1677 aa27.4■■□□□ 1.98
SERF1A-201ENST00000317633 C1orf141Q5JVX7 400 aa27.39■■□□□ 1.98
SERF1A-201ENST00000317633 SMIM5Q71RC9 77 aa27.39■■□□□ 1.98
SERF1A-201ENST00000317633 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
SERF1A-201ENST00000317633 CABP4P57796 275 aa27.38■■□□□ 1.97
SERF1A-201ENST00000317633 KDRP35968 1356 aa27.37■■□□□ 1.97
SERF1A-201ENST00000317633 MTHFSP49914 203 aa27.37■■□□□ 1.97
SERF1A-201ENST00000317633 RTCBQ9Y3I0 505 aaKnown RBP27.37■■□□□ 1.97
SERF1A-201ENST00000317633 SULT6B1Q6IMI4 303 aa27.36■■□□□ 1.97
SERF1A-201ENST00000317633 AEBP1Q8IUX7 1158 aa27.36■■□□□ 1.97
SERF1A-201ENST00000317633 KDM6AO15550 1401 aaPredicted RBP27.35■■□□□ 1.97
SERF1A-201ENST00000317633 C1QTNF8P60827 252 aa27.35■■□□□ 1.97
SERF1A-201ENST00000317633 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
SERF1A-201ENST00000317633 GOLGB1Q14789 3259 aaKnown RBP27.35■■□□□ 1.97
SERF1A-201ENST00000317633 RC3H1Q5TC82 1133 aaKnown RBP27.34■■□□□ 1.97
SERF1A-201ENST00000317633 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
SERF1A-201ENST00000317633 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
SERF1A-201ENST00000317633 GIGYF1O75420 1035 aaPredicted RBP27.32■■□□□ 1.96
SERF1A-201ENST00000317633 IL13P35225 146 aa27.32■■□□□ 1.96
SERF1A-201ENST00000317633 SLC4A9Q96Q91 983 aa27.32■■□□□ 1.96
SERF1A-201ENST00000317633 KIF7Q2M1P5 1343 aa27.32■■□□□ 1.96
SERF1A-201ENST00000317633 ADRA2BP18089 450 aa27.31■■□□□ 1.96
SERF1A-201ENST00000317633 NLGN1Q8N2Q7 840 aa27.31■■□□□ 1.96
SERF1A-201ENST00000317633 CNTNAP4Q9C0A0 1308 aa27.31■■□□□ 1.96
SERF1A-201ENST00000317633 MMP10P09238 476 aa27.29■■□□□ 1.96
SERF1A-201ENST00000317633 NFATC2IPQ8NCF5 419 aa27.29■■□□□ 1.96
SERF1A-201ENST00000317633 SCN11AQ9UI33 1791 aa27.29■■□□□ 1.96
SERF1A-201ENST00000317633 RPS6KA4O75676 772 aa27.28■■□□□ 1.96
SERF1A-201ENST00000317633 RFC4P35249 363 aa27.27■■□□□ 1.96
SERF1A-201ENST00000317633 ARHGEF1Q92888 912 aaKnown RBP27.27■■□□□ 1.96
SERF1A-201ENST00000317633 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
SERF1A-201ENST00000317633 SENP3-EIF4A1A0A087X0R7 540 aa27.26■■□□□ 1.95
SERF1A-201ENST00000317633 PTCD1O75127 700 aaKnown RBP27.26■■□□□ 1.95
SERF1A-201ENST00000317633 AKAP4Q5JQC9 854 aa27.25■■□□□ 1.95
SERF1A-201ENST00000317633 KIF13BQ9NQT8 1826 aa27.25■■□□□ 1.95
SERF1A-201ENST00000317633 PER1O15534 1290 aaPredicted RBP27.22■■□□□ 1.95
SERF1A-201ENST00000317633 TGFB2P61812 414 aa27.22■■□□□ 1.95
SERF1A-201ENST00000317633 WWC3Q9ULE0 1092 aa27.22■■□□□ 1.95
SERF1A-201ENST00000317633 CICQ96RK0 1608 aaPredicted RBP27.22■■□□□ 1.95
SERF1A-201ENST00000317633 ATP10DQ9P241 1426 aa27.22■■□□□ 1.95
SERF1A-201ENST00000317633 VIRMAQ69YN4 1812 aaKnown RBP27.21■■□□□ 1.95
SERF1A-201ENST00000317633 GYS1P13807 737 aa27.21■■□□□ 1.95
SERF1A-201ENST00000317633 C4AP0C0L4 1744 aa27.21■■□□□ 1.95
SERF1A-201ENST00000317633 CRKLP46109 303 aaKnown RBP27.2■■□□□ 1.94
SERF1A-201ENST00000317633 CCDC87Q9NVE4 849 aa27.2■■□□□ 1.94
SERF1A-201ENST00000317633 PARP3Q9Y6F1 533 aa27.2■■□□□ 1.94
SERF1A-201ENST00000317633 DIAPH1O60610 1272 aaKnown RBP27.19■■□□□ 1.94
SERF1A-201ENST00000317633 HMOX1P09601 288 aa27.19■■□□□ 1.94
SERF1A-201ENST00000317633 CC2D1BQ5T0F9 858 aaKnown RBP27.19■■□□□ 1.94
SERF1A-201ENST00000317633 SLC52A2Q9HAB3 445 aa27.18■■□□□ 1.94
SERF1A-201ENST00000317633 GPBP1L1Q9HC44 474 aaPredicted RBP27.18■■□□□ 1.94
SERF1A-201ENST00000317633 TJP1Q07157 1748 aa27.18■■□□□ 1.94
SERF1A-201ENST00000317633 N4BP2Q86UW6 1770 aaPredicted RBP27.17■■□□□ 1.94
SERF1A-201ENST00000317633 ADCY9O60503 1353 aa27.17■■□□□ 1.94
SERF1A-201ENST00000317633 PXDNLA1KZ92 1463 aa27.17■■□□□ 1.94
SERF1A-201ENST00000317633 C10orf71Q711Q0 1435 aa27.16■■□□□ 1.94
SERF1A-201ENST00000317633 KIAA1551Q9HCM1 1747 aa27.16■■□□□ 1.94
SERF1A-201ENST00000317633 LGR6Q9HBX8 967 aa27.15■■□□□ 1.94
SERF1A-201ENST00000317633 RNMTO43148 476 aaKnown RBP27.14■■□□□ 1.94
SERF1A-201ENST00000317633 NPC1L1Q9UHC9 1359 aa27.13■■□□□ 1.93
SERF1A-201ENST00000317633 A0A0G2JLW4 131 aa27.13■■□□□ 1.93
SERF1A-201ENST00000317633 USP42Q9H9J4 1324 aaKnown RBP27.13■■□□□ 1.93
SERF1A-201ENST00000317633 MRC1P22897 1456 aa27.13■■□□□ 1.93
SERF1A-201ENST00000317633 MTHFSDQ2M296 383 aaKnown RBP27.12■■□□□ 1.93
SERF1A-201ENST00000317633 BCS1LQ9Y276 419 aa27.12■■□□□ 1.93
SERF1A-201ENST00000317633 INTS5Q6P9B9 1019 aaKnown RBP27.1■■□□□ 1.93
SERF1A-201ENST00000317633 DNAJC10Q8IXB1 793 aa27.1■■□□□ 1.93
SERF1A-201ENST00000317633 SRP68Q9UHB9 627 aaKnown RBP27.1■■□□□ 1.93
SERF1A-201ENST00000317633 ADAMTS7Q9UKP4 1686 aa27.09■■□□□ 1.93
SERF1A-201ENST00000317633 DPEP1P16444 411 aa27.09■■□□□ 1.93
SERF1A-201ENST00000317633 ZNF526Q8TF50 670 aaPredicted RBP27.09■■□□□ 1.93
SERF1A-201ENST00000317633 BRCA1P38398 1863 aaKnown RBP27.08■■□□□ 1.93
SERF1A-201ENST00000317633 ZPR1O75312 459 aa27.08■■□□□ 1.93
SERF1A-201ENST00000317633 SLC39A6Q13433 755 aa27.08■■□□□ 1.93
SERF1A-201ENST00000317633 FKBP8Q14318 412 aa27.07■■□□□ 1.92
SERF1A-201ENST00000317633 FCHSD2O94868 740 aa27.06■■□□□ 1.92
SERF1A-201ENST00000317633 VSIG10Q8N0Z9 540 aa27.06■■□□□ 1.92
SERF1A-201ENST00000317633 U2SURPO15042 1029 aaKnown RBP27.05■■□□□ 1.92
SERF1A-201ENST00000317633 CYP19A1P11511 503 aaPredicted RBP27.05■■□□□ 1.92
SERF1A-201ENST00000317633 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
SERF1A-201ENST00000317633 ARFGEF1Q9Y6D6 1849 aa27.04■■□□□ 1.92
SERF1A-201ENST00000317633 ARHGAP27Q6ZUM4 889 aa27.04■■□□□ 1.92
SERF1A-201ENST00000317633 PIM2Q9P1W9 311 aa27.04■■□□□ 1.92
SERF1A-201ENST00000317633 SOS1Q07889 1333 aaPredicted RBP27.04■■□□□ 1.92
SERF1A-201ENST00000317633 COL3A1P02461 1466 aaPredicted RBP27.04■■□□□ 1.92
SERF1A-201ENST00000317633 KCPQ6ZWJ8 1503 aa27.04■■□□□ 1.92
SERF1A-201ENST00000317633 DDR1Q08345 913 aa27.03■■□□□ 1.92
SERF1A-201ENST00000317633 TTC5Q8N0Z6 440 aa27.03■■□□□ 1.92
SERF1A-201ENST00000317633 GAS2L2Q8NHY3 880 aa27.03■■□□□ 1.92
SERF1A-201ENST00000317633 UBR2Q8IWV8 1755 aa27.02■■□□□ 1.92
SERF1A-201ENST00000317633 USPL1Q5W0Q7 1092 aa27.02■■□□□ 1.92
SERF1A-201ENST00000317633 TM4SF1P30408 202 aa27.01■■□□□ 1.91
SERF1A-201ENST00000317633 NARFQ9UHQ1 456 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms