RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 ASAP1Q9ULH1 1129 aa29.21■■■□□ 2.27
SNUPN-201ENST00000308588 DLG5Q8TDM6 1919 aa29.21■■■□□ 2.27
SNUPN-201ENST00000308588 DCTN1Q14203 1278 aa29.2■■■□□ 2.27
SNUPN-201ENST00000308588 MCM10Q7L590 875 aa29.2■■■□□ 2.27
SNUPN-201ENST00000308588 ATG3Q9NT62 314 aa29.2■■■□□ 2.27
SNUPN-201ENST00000308588 RIPK4P57078 832 aa29.2■■■□□ 2.26
SNUPN-201ENST00000308588 SMARCC1Q92922 1105 aaPredicted RBP29.19■■■□□ 2.26
SNUPN-201ENST00000308588 RRP7AQ9Y3A4 280 aaKnown RBP29.19■■■□□ 2.26
SNUPN-201ENST00000308588 PALLDQ8WX93 1383 aa29.18■■■□□ 2.26
SNUPN-201ENST00000308588 RREB1Q92766 1687 aa29.18■■■□□ 2.26
SNUPN-201ENST00000308588 APAF1O14727 1248 aa29.17■■■□□ 2.26
SNUPN-201ENST00000308588 FAM9BQ8IZU0 186 aa29.17■■■□□ 2.26
SNUPN-201ENST00000308588 TEFQ10587 303 aa29.16■■■□□ 2.26
SNUPN-201ENST00000308588 LY75O60449 1722 aa29.16■■■□□ 2.26
SNUPN-201ENST00000308588 NEUROD2Q15784 382 aa29.15■■■□□ 2.26
SNUPN-201ENST00000308588 LRRC4BQ9NT99 713 aa29.15■■■□□ 2.26
SNUPN-201ENST00000308588 SLC27A3Q5K4L6 730 aa29.14■■■□□ 2.25
SNUPN-201ENST00000308588 KCNQ4P56696 695 aa29.13■■■□□ 2.25
SNUPN-201ENST00000308588 NUP188Q5SRE5 1749 aa29.12■■■□□ 2.25
SNUPN-201ENST00000308588 SIPA1L3O60292 1781 aaPredicted RBP29.12■■■□□ 2.25
SNUPN-201ENST00000308588 THUMPD2Q9BTF0 503 aaKnown RBP29.12■■■□□ 2.25
SNUPN-201ENST00000308588 TRIM35Q9UPQ4 493 aa29.12■■■□□ 2.25
SNUPN-201ENST00000308588 SLC39A6Q13433 755 aa29.11■■■□□ 2.25
SNUPN-201ENST00000308588 CCNL1Q9UK58 526 aaPredicted RBP29.11■■■□□ 2.25
SNUPN-201ENST00000308588 LMOD3Q0VAK6 560 aa29.1■■■□□ 2.25
SNUPN-201ENST00000308588 LOC102724428A0A0B4J2F2 783 aa29.1■■■□□ 2.25
SNUPN-201ENST00000308588 SIK1P57059 783 aa29.1■■■□□ 2.25
SNUPN-201ENST00000308588 PAPPAQ13219 1627 aa29.08■■■□□ 2.25
SNUPN-201ENST00000308588 SLC4A9Q96Q91 983 aa29.07■■■□□ 2.24
SNUPN-201ENST00000308588 BTBD11A6QL63 1104 aa29.06■■■□□ 2.24
SNUPN-201ENST00000308588 PTCD1O75127 700 aaKnown RBP29.06■■■□□ 2.24
SNUPN-201ENST00000308588 TAF7Q15545 349 aaPredicted RBP29.06■■■□□ 2.24
SNUPN-201ENST00000308588 RBM42Q9BTD8 480 aaKnown RBP29.06■■■□□ 2.24
SNUPN-201ENST00000308588 SENP3-EIF4A1A0A087X0R7 540 aa29.05■■■□□ 2.24
SNUPN-201ENST00000308588 ANO8Q9HCE9 1232 aaPredicted RBP29.05■■■□□ 2.24
SNUPN-201ENST00000308588 ZNF790Q6PG37 636 aa29.04■■■□□ 2.24
SNUPN-201ENST00000308588 ATP6V1AP38606 617 aa29.04■■■□□ 2.24
SNUPN-201ENST00000308588 KCPQ6ZWJ8 1503 aa29.02■■■□□ 2.24
SNUPN-201ENST00000308588 KCNQ3O43525 872 aa29.02■■■□□ 2.24
SNUPN-201ENST00000308588 ITPK1Q13572 414 aa29.02■■■□□ 2.24
SNUPN-201ENST00000308588 NBPF14Q5TI25 921 aa29.02■■■□□ 2.24
SNUPN-201ENST00000308588 MIS18AQ9NYP9 233 aa29.02■■■□□ 2.24
SNUPN-201ENST00000308588 TTC5Q8N0Z6 440 aa29.01■■■□□ 2.23
SNUPN-201ENST00000308588 ZNF831Q5JPB2 1677 aa28.99■■■□□ 2.23
SNUPN-201ENST00000308588 UBR2Q8IWV8 1755 aa28.99■■■□□ 2.23
SNUPN-201ENST00000308588 ZNF496Q96IT1 587 aaPredicted RBP28.99■■■□□ 2.23
SNUPN-201ENST00000308588 NCBP3Q53F19 620 aaKnown RBP28.99■■■□□ 2.23
SNUPN-201ENST00000308588 AKT1S1Q96B36 256 aa28.99■■■□□ 2.23
SNUPN-201ENST00000308588 TAF1LQ8IZX4 1826 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 SLC15A2Q16348 729 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 ZNF827Q17R98 1081 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 CCDC27Q2M243 656 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 LINC00116Q8NCU8 138 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 C5P01031 1676 aa28.98■■■□□ 2.23
SNUPN-201ENST00000308588 STK32BQ9NY57 414 aa28.97■■■□□ 2.23
SNUPN-201ENST00000308588 R3HDM1Q15032 1099 aaKnown RBP28.96■■■□□ 2.23
SNUPN-201ENST00000308588 HMGB2P26583 209 aaKnown RBP28.95■■■□□ 2.23
SNUPN-201ENST00000308588 VSIG10Q8N0Z9 540 aa28.95■■■□□ 2.23
SNUPN-201ENST00000308588 WWC1Q8IX03 1113 aa28.94■■■□□ 2.22
SNUPN-201ENST00000308588 FMNL2Q96PY5 1086 aa28.94■■■□□ 2.22
SNUPN-201ENST00000308588 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
SNUPN-201ENST00000308588 BABAM1Q9NWV8 329 aa28.94■■■□□ 2.22
SNUPN-201ENST00000308588 SALL2Q9Y467 1007 aaPredicted RBP28.94■■■□□ 2.22
SNUPN-201ENST00000308588 HEG1Q9ULI3 1381 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 CICQ96RK0 1608 aaPredicted RBP28.93■■■□□ 2.22
SNUPN-201ENST00000308588 KDM3BQ7LBC6 1761 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 DNAJC10Q8IXB1 793 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 TSPYL4Q9UJ04 414 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 C4BP0C0L5 1744 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 TJP1Q07157 1748 aa28.93■■■□□ 2.22
SNUPN-201ENST00000308588 CHL1O00533 1208 aa28.92■■■□□ 2.22
SNUPN-201ENST00000308588 LAS1LQ9Y4W2 734 aaKnown RBP28.9■■■□□ 2.22
SNUPN-201ENST00000308588 COL5A3P25940 1745 aaPredicted RBP28.9■■■□□ 2.22
SNUPN-201ENST00000308588 EIF4A1P60842 406 aaKnown RBP28.89■■■□□ 2.22
SNUPN-201ENST00000308588 CALD1Q05682 793 aaKnown RBP28.89■■■□□ 2.22
SNUPN-201ENST00000308588 NGEFQ8N5V2 710 aa28.89■■■□□ 2.22
SNUPN-201ENST00000308588 CFAP44Q96MT7 982 aa28.89■■■□□ 2.22
SNUPN-201ENST00000308588 ZNF853P0CG23 659 aa28.89■■■□□ 2.21
SNUPN-201ENST00000308588 TFCP2L1Q9NZI6 479 aa28.89■■■□□ 2.21
SNUPN-201ENST00000308588 CYP19A1P11511 503 aaPredicted RBP28.88■■■□□ 2.21
SNUPN-201ENST00000308588 RC3H1Q5TC82 1133 aaKnown RBP28.88■■■□□ 2.21
SNUPN-201ENST00000308588 CNTNAP4Q9C0A0 1308 aa28.87■■■□□ 2.21
SNUPN-201ENST00000308588 AK7Q96M32 723 aa28.87■■■□□ 2.21
SNUPN-201ENST00000308588 IFT57Q9NWB7 429 aa28.87■■■□□ 2.21
SNUPN-201ENST00000308588 PRAMEF22A3QJZ6 481 aa28.86■■■□□ 2.21
SNUPN-201ENST00000308588 CRKLP46109 303 aaKnown RBP28.86■■■□□ 2.21
SNUPN-201ENST00000308588 AMIGO3Q86WK7 504 aa28.86■■■□□ 2.21
SNUPN-201ENST00000308588 SNRPA1P09661 255 aaKnown RBP28.85■■■□□ 2.21
SNUPN-201ENST00000308588 TEX13AQ9BXU3 409 aaPredicted RBP28.85■■■□□ 2.21
SNUPN-201ENST00000308588 PDGFDQ9GZP0 370 aaPredicted RBP28.85■■■□□ 2.21
SNUPN-201ENST00000308588 MYH14Q7Z406 1995 aaKnown RBP28.85■■■□□ 2.21
SNUPN-201ENST00000308588 PNPLA7Q6ZV29 1317 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 TUBGCP6Q96RT7 1819 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 GNPATO15228 680 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 GNAI1P63096 354 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 INTS5Q6P9B9 1019 aaKnown RBP28.84■■■□□ 2.21
SNUPN-201ENST00000308588 MBIPQ9NS73 344 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 USP16Q9Y5T5 823 aa28.84■■■□□ 2.21
SNUPN-201ENST00000308588 GIGYF1O75420 1035 aaPredicted RBP28.83■■■□□ 2.21
SNUPN-201ENST00000308588 SMIM5Q71RC9 77 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms