RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 HSPA1LP34931 641 aa22.41■■□□□ 1.18
KRT28-201ENST00000306658 FTSJ3Q8IY81 847 aaKnown RBP22.41■■□□□ 1.18
KRT28-201ENST00000306658 DZIP1LQ8IYY4 767 aaKnown RBP22.41■■□□□ 1.18
KRT28-201ENST00000306658 PANK1Q8TE04 598 aa22.41■■□□□ 1.18
KRT28-201ENST00000306658 ARHGAP45Q92619 1136 aa22.41■■□□□ 1.18
KRT28-201ENST00000306658 CHMP4AQ9BY43 222 aa22.41■■□□□ 1.18
KRT28-201ENST00000306658 THRAP3Q9Y2W1 955 aaKnown RBP22.41■■□□□ 1.18
KRT28-201ENST00000306658 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
KRT28-201ENST00000306658 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
KRT28-201ENST00000306658 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
KRT28-201ENST00000306658 TRIM27P14373 513 aa22.39■■□□□ 1.18
KRT28-201ENST00000306658 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.18
KRT28-201ENST00000306658 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.18
KRT28-201ENST00000306658 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.18
KRT28-201ENST00000306658 NGLY1Q96IV0 654 aa22.39■■□□□ 1.18
KRT28-201ENST00000306658 SIPA1L3O60292 1781 aaPredicted RBP22.39■■□□□ 1.17
KRT28-201ENST00000306658 DDX54Q8TDD1 881 aaKnown RBP22.39■■□□□ 1.17
KRT28-201ENST00000306658 CLUAP1Q96AJ1 413 aa22.39■■□□□ 1.17
KRT28-201ENST00000306658 SPATA31A1Q5TZJ5 1347 aa22.38■■□□□ 1.17
KRT28-201ENST00000306658 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
KRT28-201ENST00000306658 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
KRT28-201ENST00000306658 HOXB7P09629 217 aa22.38■■□□□ 1.17
KRT28-201ENST00000306658 NFATC2IPQ8NCF5 419 aa22.38■■□□□ 1.17
KRT28-201ENST00000306658 COG6Q9Y2V7 657 aa22.38■■□□□ 1.17
KRT28-201ENST00000306658 CABP4P57796 275 aa22.37■■□□□ 1.17
KRT28-201ENST00000306658 CCDC30Q5VVM6 783 aa22.37■■□□□ 1.17
KRT28-201ENST00000306658 UNC5CLQ8IV45 518 aa22.37■■□□□ 1.17
KRT28-201ENST00000306658 C8orf37Q96NL8 207 aa22.37■■□□□ 1.17
KRT28-201ENST00000306658 ERVV-2B6SEH9 535 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 RLBP1P12271 317 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 AAMPQ13685 434 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 MRC1P22897 1456 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 EXOC5O00471 708 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 TNNQ9UQP3 1299 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 SPATA31A5Q5VU36 1347 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 SPATA31A7Q8IWB4 1347 aa22.36■■□□□ 1.17
KRT28-201ENST00000306658 KCNQ3O43525 872 aa22.35■■□□□ 1.17
KRT28-201ENST00000306658 CCDC9Q9Y3X0 531 aaKnown RBP22.35■■□□□ 1.17
KRT28-201ENST00000306658 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
KRT28-201ENST00000306658 SLC4A2P04920 1241 aa22.34■■□□□ 1.17
KRT28-201ENST00000306658 API5Q9BZZ5 524 aaKnown RBP22.34■■□□□ 1.17
KRT28-201ENST00000306658 MVPQ14764 893 aaKnown RBP22.33■■□□□ 1.17
KRT28-201ENST00000306658 ZNF790Q6PG37 636 aa22.33■■□□□ 1.17
KRT28-201ENST00000306658 FNBP4Q8N3X1 1017 aaPredicted RBP22.33■■□□□ 1.17
KRT28-201ENST00000306658 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.16
KRT28-201ENST00000306658 PTPRCP08575 1304 aa22.32■■□□□ 1.16
KRT28-201ENST00000306658 HDGFL1Q5TGJ6 251 aa22.32■■□□□ 1.16
KRT28-201ENST00000306658 BARGINQ6ZT62 677 aa22.32■■□□□ 1.16
KRT28-201ENST00000306658 CACNA1FO60840 1977 aa22.31■■□□□ 1.16
KRT28-201ENST00000306658 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
KRT28-201ENST00000306658 HEG1Q9ULI3 1381 aa22.31■■□□□ 1.16
KRT28-201ENST00000306658 MEX3CQ5U5Q3 659 aaKnown RBP22.31■■□□□ 1.16
KRT28-201ENST00000306658 TTC5Q8N0Z6 440 aa22.31■■□□□ 1.16
KRT28-201ENST00000306658 LRP6O75581 1613 aa22.31■■□□□ 1.16
KRT28-201ENST00000306658 VPS72Q15906 364 aa22.3■■□□□ 1.16
KRT28-201ENST00000306658 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
KRT28-201ENST00000306658 BCL9LQ86UU0 1499 aa22.3■■□□□ 1.16
KRT28-201ENST00000306658 GIGYF1O75420 1035 aaPredicted RBP22.3■■□□□ 1.16
KRT28-201ENST00000306658 SLC39A6Q13433 755 aa22.3■■□□□ 1.16
KRT28-201ENST00000306658 ITPRIPQ8IWB1 547 aa22.3■■□□□ 1.16
KRT28-201ENST00000306658 TMEM57Q8N5G2 664 aa22.29■■□□□ 1.16
KRT28-201ENST00000306658 EIF2S2P20042 333 aaKnown RBP22.28■■□□□ 1.16
KRT28-201ENST00000306658 DDB1Q16531 1140 aa22.28■■□□□ 1.16
KRT28-201ENST00000306658 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
KRT28-201ENST00000306658 USP21Q9UK80 565 aa22.28■■□□□ 1.16
KRT28-201ENST00000306658 TNS2Q63HR2 1409 aa22.28■■□□□ 1.16
KRT28-201ENST00000306658 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
KRT28-201ENST00000306658 ABCC4O15439 1325 aa22.27■■□□□ 1.16
KRT28-201ENST00000306658 FMNL2Q96PY5 1086 aa22.26■■□□□ 1.15
KRT28-201ENST00000306658 TMOD3Q9NYL9 352 aa22.25■■□□□ 1.15
KRT28-201ENST00000306658 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
KRT28-201ENST00000306658 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.23■■□□□ 1.15
KRT28-201ENST00000306658 SNRPA1P09661 255 aaKnown RBP22.23■■□□□ 1.15
KRT28-201ENST00000306658 FLIIQ13045 1269 aa22.23■■□□□ 1.15
KRT28-201ENST00000306658 G2E3Q7L622 706 aa22.23■■□□□ 1.15
KRT28-201ENST00000306658 DBF4Q9UBU7 674 aaPredicted RBP22.23■■□□□ 1.15
KRT28-201ENST00000306658 CHPF2Q9P2E5 772 aa22.21■■□□□ 1.15
KRT28-201ENST00000306658 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.15
KRT28-201ENST00000306658 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.15
KRT28-201ENST00000306658 INTS3Q68E01 1043 aaKnown RBP22.2■■□□□ 1.15
KRT28-201ENST00000306658 RGS12O14924 1447 aa22.2■■□□□ 1.14
KRT28-201ENST00000306658 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
KRT28-201ENST00000306658 AFF2P51816 1311 aa22.19■■□□□ 1.14
KRT28-201ENST00000306658 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
KRT28-201ENST00000306658 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
KRT28-201ENST00000306658 PIGBQ92521 554 aa22.18■■□□□ 1.14
KRT28-201ENST00000306658 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
KRT28-201ENST00000306658 HYPKQ9NX55 129 aa22.18■■□□□ 1.14
KRT28-201ENST00000306658 KAT6BQ8WYB5 2073 aa22.18■■□□□ 1.14
KRT28-201ENST00000306658 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
KRT28-201ENST00000306658 CCT4P50991 539 aaKnown RBP22.17■■□□□ 1.14
KRT28-201ENST00000306658 MARCH10Q8NA82 808 aaPredicted RBP22.17■■□□□ 1.14
KRT28-201ENST00000306658 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
KRT28-201ENST00000306658 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
KRT28-201ENST00000306658 ITGB4P16144 1822 aa22.17■■□□□ 1.14
KRT28-201ENST00000306658 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
KRT28-201ENST00000306658 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
KRT28-201ENST00000306658 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
KRT28-201ENST00000306658 GJD4Q96KN9 370 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms