RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
TMEM41A-201ENST00000296254 ATP6V1AP38606 617 aa22.03■■□□□ 1.12
TMEM41A-201ENST00000296254 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
TMEM41A-201ENST00000296254 ZNF831Q5JPB2 1677 aa22.02■■□□□ 1.12
TMEM41A-201ENST00000296254 CICQ96RK0 1608 aaPredicted RBP21.98■■□□□ 1.11
TMEM41A-201ENST00000296254 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
TMEM41A-201ENST00000296254 COL5A3P25940 1745 aaPredicted RBP21.98■■□□□ 1.11
TMEM41A-201ENST00000296254 ERVV-2B6SEH9 535 aa21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 HSP90AB1P08238 724 aaKnown RBP21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 DCAF5Q96JK2 942 aa21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 SLC4A9Q96Q91 983 aa21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
TMEM41A-201ENST00000296254 KIF13BQ9NQT8 1826 aa21.96■■□□□ 1.11
TMEM41A-201ENST00000296254 MMP10P09238 476 aa21.96■■□□□ 1.11
TMEM41A-201ENST00000296254 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
TMEM41A-201ENST00000296254 PANK3Q9H999 370 aa21.96■■□□□ 1.11
TMEM41A-201ENST00000296254 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
TMEM41A-201ENST00000296254 HSPA5P11021 654 aaKnown RBP21.95■■□□□ 1.1
TMEM41A-201ENST00000296254 GPBP1L1Q9HC44 474 aaPredicted RBP21.95■■□□□ 1.1
TMEM41A-201ENST00000296254 RTCBQ9Y3I0 505 aaKnown RBP21.95■■□□□ 1.1
TMEM41A-201ENST00000296254 KIAA1551Q9HCM1 1747 aa21.94■■□□□ 1.1
TMEM41A-201ENST00000296254 PLEKHO1Q53GL0 409 aaPredicted RBP21.94■■□□□ 1.1
TMEM41A-201ENST00000296254 CNTNAP4Q9C0A0 1308 aa21.94■■□□□ 1.1
TMEM41A-201ENST00000296254 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
TMEM41A-201ENST00000296254 ADRA2BP18089 450 aa21.93■■□□□ 1.1
TMEM41A-201ENST00000296254 AMOTQ4VCS5 1084 aa21.93■■□□□ 1.1
TMEM41A-201ENST00000296254 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
TMEM41A-201ENST00000296254 RC3H1Q5TC82 1133 aaKnown RBP21.92■■□□□ 1.1
TMEM41A-201ENST00000296254 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
TMEM41A-201ENST00000296254 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
TMEM41A-201ENST00000296254 TRAPPC3LQ5T215 181 aa21.91■■□□□ 1.1
TMEM41A-201ENST00000296254 C4AP0C0L4 1744 aa21.91■■□□□ 1.1
TMEM41A-201ENST00000296254 NLGN1Q8N2Q7 840 aa21.9■■□□□ 1.1
TMEM41A-201ENST00000296254 ZNF526Q8TF50 670 aaPredicted RBP21.9■■□□□ 1.1
TMEM41A-201ENST00000296254 CABP4P57796 275 aa21.89■■□□□ 1.09
TMEM41A-201ENST00000296254 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
TMEM41A-201ENST00000296254 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.09
TMEM41A-201ENST00000296254 GYS1P13807 737 aa21.88■■□□□ 1.09
TMEM41A-201ENST00000296254 MYH14Q7Z406 1995 aaKnown RBP21.88■■□□□ 1.09
TMEM41A-201ENST00000296254 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
TMEM41A-201ENST00000296254 RPS6KA4O75676 772 aa21.87■■□□□ 1.09
TMEM41A-201ENST00000296254 MTHFSP49914 203 aa21.87■■□□□ 1.09
TMEM41A-201ENST00000296254 TGFB2P61812 414 aa21.87■■□□□ 1.09
TMEM41A-201ENST00000296254 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
TMEM41A-201ENST00000296254 TJP1Q07157 1748 aa21.86■■□□□ 1.09
TMEM41A-201ENST00000296254 RFC4P35249 363 aa21.85■■□□□ 1.09
TMEM41A-201ENST00000296254 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
TMEM41A-201ENST00000296254 BRCA1P38398 1863 aaKnown RBP21.84■■□□□ 1.09
TMEM41A-201ENST00000296254 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
TMEM41A-201ENST00000296254 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
TMEM41A-201ENST00000296254 IL13P35225 146 aa21.83■■□□□ 1.09
TMEM41A-201ENST00000296254 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
TMEM41A-201ENST00000296254 BCS1LQ9Y276 419 aa21.83■■□□□ 1.09
TMEM41A-201ENST00000296254 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
TMEM41A-201ENST00000296254 SCN11AQ9UI33 1791 aa21.83■■□□□ 1.09
TMEM41A-201ENST00000296254 A0A0G2JLW4 131 aa21.82■■□□□ 1.08
TMEM41A-201ENST00000296254 HSPA6P17066 643 aa21.82■■□□□ 1.08
TMEM41A-201ENST00000296254 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
TMEM41A-201ENST00000296254 MRC1P22897 1456 aa21.82■■□□□ 1.08
TMEM41A-201ENST00000296254 KIF3CO14782 793 aa21.81■■□□□ 1.08
TMEM41A-201ENST00000296254 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
TMEM41A-201ENST00000296254 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
TMEM41A-201ENST00000296254 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
TMEM41A-201ENST00000296254 DPEP1P16444 411 aa21.8■■□□□ 1.08
TMEM41A-201ENST00000296254 AMER1Q5JTC6 1135 aaPredicted RBP21.8■■□□□ 1.08
TMEM41A-201ENST00000296254 SRP68Q9UHB9 627 aaKnown RBP21.78■■□□□ 1.08
TMEM41A-201ENST00000296254 FKBP8Q14318 412 aa21.77■■□□□ 1.08
TMEM41A-201ENST00000296254 AKAP4Q5JQC9 854 aa21.77■■□□□ 1.08
TMEM41A-201ENST00000296254 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
TMEM41A-201ENST00000296254 FCHSD2O94868 740 aa21.76■■□□□ 1.07
TMEM41A-201ENST00000296254 KCNA3P22001 575 aa21.76■■□□□ 1.07
TMEM41A-201ENST00000296254 DDR1Q08345 913 aa21.76■■□□□ 1.07
TMEM41A-201ENST00000296254 SLC52A2Q9HAB3 445 aa21.76■■□□□ 1.07
TMEM41A-201ENST00000296254 INTS5Q6P9B9 1019 aaKnown RBP21.75■■□□□ 1.07
TMEM41A-201ENST00000296254 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
TMEM41A-201ENST00000296254 KIF7Q2M1P5 1343 aa21.75■■□□□ 1.07
TMEM41A-201ENST00000296254 KCPQ6ZWJ8 1503 aa21.75■■□□□ 1.07
TMEM41A-201ENST00000296254 ARHGAP27Q6ZUM4 889 aa21.74■■□□□ 1.07
TMEM41A-201ENST00000296254 DNAJC10Q8IXB1 793 aa21.72■■□□□ 1.07
TMEM41A-201ENST00000296254 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
TMEM41A-201ENST00000296254 PIM2Q9P1W9 311 aa21.72■■□□□ 1.07
TMEM41A-201ENST00000296254 SOS1Q07889 1333 aaPredicted RBP21.72■■□□□ 1.07
TMEM41A-201ENST00000296254 POLRMTO00411 1230 aaKnown RBP21.71■■□□□ 1.07
TMEM41A-201ENST00000296254 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
TMEM41A-201ENST00000296254 HMOX1P09601 288 aa21.7■■□□□ 1.06
TMEM41A-201ENST00000296254 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
TMEM41A-201ENST00000296254 TOMM70O94826 608 aa21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 SLC39A6Q13433 755 aa21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 DALRD3Q5D0E6 543 aaKnown RBP21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 COL15A1P39059 1388 aa21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
TMEM41A-201ENST00000296254 ZPR1O75312 459 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 TM4SF1P30408 202 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 IFFO2Q5TF58 517 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 USPL1Q5W0Q7 1092 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 NMRK2Q9NPI5 230 aa21.68■■□□□ 1.06
TMEM41A-201ENST00000296254 CHRNA5P30532 468 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms