RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 KDM4AO75164 1064 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 SRLQ86TD4 932 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
SNIP1-201ENST00000296215 ATP2C2O75185 946 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 RMI1Q9H9A7 625 aa13.67□□□□□ -0.22
SNIP1-201ENST00000296215 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 CABS1Q96KC9 395 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 DNAI1Q9UI46 699 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 B4GALNT4Q76KP1 1039 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-201ENST00000296215 NCBP1Q09161 790 aaKnown RBP13.66□□□□□ -0.22
SNIP1-201ENST00000296215 CCDC121Q6ZUS5 278 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
SNIP1-201ENST00000296215 BUB1BO60566 1050 aaPredicted RBP13.65□□□□□ -0.22
SNIP1-201ENST00000296215 TMEM132AQ24JP5 1023 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 TADA2BQ86TJ2 420 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 H3BQV1 296 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
SNIP1-201ENST00000296215 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 RAD50Q92878 1312 aa13.65□□□□□ -0.22
SNIP1-201ENST00000296215 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.23
SNIP1-201ENST00000296215 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 SH3BP1Q9Y3L3 701 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 HDXQ7Z353 690 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
SNIP1-201ENST00000296215 PFDN1O60925 122 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 MCM3P25205 808 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 ARHGAP25P42331 645 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 GSDMDP57764 484 aa13.64□□□□□ -0.23
SNIP1-201ENST00000296215 CEP104O60308 925 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 RPSAP08865 295 aaKnown RBP13.63□□□□□ -0.23
SNIP1-201ENST00000296215 DZIP1LQ8IYY4 767 aaKnown RBP13.63□□□□□ -0.23
SNIP1-201ENST00000296215 SNX21Q969T3 373 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
SNIP1-201ENST00000296215 ANKRD65E5RJM6 399 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 TUBB4AP04350 444 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
SNIP1-201ENST00000296215 HYPKQ9NX55 129 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
SNIP1-201ENST00000296215 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 ELF1P32519 619 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 HSP90AB4PQ58FF6 505 aa13.63□□□□□ -0.23
SNIP1-201ENST00000296215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■■ 71.4
SNIP1-201ENST00000296215 SMIM24O75264 130 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 AFAP1L1Q8TED9 768 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 ERCC6LQ2NKX8 1250 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 EVCP57679 992 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 CCDC92Q53HC0 331 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-201ENST00000296215 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 BCAR3O75815 825 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 CCDC175P0C221 793 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
SNIP1-201ENST00000296215 SEPT6Q14141 434 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 CA8P35219 290 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 CAMK4Q16566 473 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
SNIP1-201ENST00000296215 NDUFAB1O14561 156 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 CHUKO15111 745 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 IQCGQ9H095 443 aaKnown RBP13.6□□□□□ -0.23
SNIP1-201ENST00000296215 KIF4BQ2VIQ3 1234 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
SNIP1-201ENST00000296215 SLC8A1P32418 973 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 GOLGA1Q92805 767 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 APAF1O14727 1248 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-201ENST00000296215 ABCD1P33897 745 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 GIMAP6Q6P9H5 292 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 ETAA1Q9NY74 926 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
SNIP1-201ENST00000296215 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 MUM1L1Q5H9M0 696 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 GNG11P61952 73 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 FAM76AQ8TAV0 307 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 SPDL1Q96EA4 605 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
SNIP1-201ENST00000296215 SERPINC1P01008 464 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms