RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 KDRP35968 1356 aa20.91■□□□□ 0.94
SOD1-201ENST00000270142 KDM6AO15550 1401 aaPredicted RBP20.9■□□□□ 0.94
SOD1-201ENST00000270142 GNPATO15228 680 aa20.9■□□□□ 0.94
SOD1-201ENST00000270142 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
SOD1-201ENST00000270142 AEBP1Q8IUX7 1158 aa20.9■□□□□ 0.94
SOD1-201ENST00000270142 ERVV-2B6SEH9 535 aa20.89■□□□□ 0.93
SOD1-201ENST00000270142 GRIN3BO60391 1043 aa20.89■□□□□ 0.93
SOD1-201ENST00000270142 HSP90AB1P08238 724 aaKnown RBP20.88■□□□□ 0.93
SOD1-201ENST00000270142 ZNF530Q6P9A1 599 aaPredicted RBP20.88■□□□□ 0.93
SOD1-201ENST00000270142 DCAF5Q96JK2 942 aa20.88■□□□□ 0.93
SOD1-201ENST00000270142 SLC4A9Q96Q91 983 aa20.88■□□□□ 0.93
SOD1-201ENST00000270142 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
SOD1-201ENST00000270142 AMOTQ4VCS5 1084 aa20.87■□□□□ 0.93
SOD1-201ENST00000270142 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
SOD1-201ENST00000270142 AMER1Q5JTC6 1135 aaPredicted RBP20.85■□□□□ 0.93
SOD1-201ENST00000270142 SULT6B1Q6IMI4 303 aa20.85■□□□□ 0.93
SOD1-201ENST00000270142 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
SOD1-201ENST00000270142 IL13P35225 146 aa20.84■□□□□ 0.93
SOD1-201ENST00000270142 CABP4P57796 275 aa20.84■□□□□ 0.93
SOD1-201ENST00000270142 C1QTNF8P60827 252 aa20.83■□□□□ 0.93
SOD1-201ENST00000270142 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
SOD1-201ENST00000270142 MTHFSP49914 203 aa20.82■□□□□ 0.92
SOD1-201ENST00000270142 C1orf141Q5JVX7 400 aa20.82■□□□□ 0.92
SOD1-201ENST00000270142 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
SOD1-201ENST00000270142 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
SOD1-201ENST00000270142 COL5A3P25940 1745 aaPredicted RBP20.81■□□□□ 0.92
SOD1-201ENST00000270142 CNTNAP4Q9C0A0 1308 aa20.8■□□□□ 0.92
SOD1-201ENST00000270142 TRAPPC3LQ5T215 181 aa20.8■□□□□ 0.92
SOD1-201ENST00000270142 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
SOD1-201ENST00000270142 MMP10P09238 476 aa20.79■□□□□ 0.92
SOD1-201ENST00000270142 RC3H1Q5TC82 1133 aaKnown RBP20.79■□□□□ 0.92
SOD1-201ENST00000270142 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
SOD1-201ENST00000270142 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
SOD1-201ENST00000270142 PTCD1O75127 700 aaKnown RBP20.77■□□□□ 0.92
SOD1-201ENST00000270142 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SOD1-201ENST00000270142 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
SOD1-201ENST00000270142 CICQ96RK0 1608 aaPredicted RBP20.76■□□□□ 0.91
SOD1-201ENST00000270142 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
SOD1-201ENST00000270142 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
SOD1-201ENST00000270142 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
SOD1-201ENST00000270142 GYS1P13807 737 aa20.75■□□□□ 0.91
SOD1-201ENST00000270142 AKAP4Q5JQC9 854 aa20.75■□□□□ 0.91
SOD1-201ENST00000270142 HMOX1P09601 288 aa20.74■□□□□ 0.91
SOD1-201ENST00000270142 CC2D1BQ5T0F9 858 aaKnown RBP20.74■□□□□ 0.91
SOD1-201ENST00000270142 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
SOD1-201ENST00000270142 PXDNLA1KZ92 1463 aa20.74■□□□□ 0.91
SOD1-201ENST00000270142 MYH14Q7Z406 1995 aaKnown RBP20.74■□□□□ 0.91
SOD1-201ENST00000270142 ADCY9O60503 1353 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 C10orf71Q711Q0 1435 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 RFC4P35249 363 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
SOD1-201ENST00000270142 C4AP0C0L4 1744 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 TJP1Q07157 1748 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
SOD1-201ENST00000270142 KIF13BQ9NQT8 1826 aa20.71■□□□□ 0.91
SOD1-201ENST00000270142 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
SOD1-201ENST00000270142 LGR6Q9HBX8 967 aa20.71■□□□□ 0.91
SOD1-201ENST00000270142 MRC1P22897 1456 aa20.7■□□□□ 0.9
SOD1-201ENST00000270142 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
SOD1-201ENST00000270142 DIAPH1O60610 1272 aaKnown RBP20.69■□□□□ 0.9
SOD1-201ENST00000270142 TGFB2P61812 414 aa20.69■□□□□ 0.9
SOD1-201ENST00000270142 CCDC87Q9NVE4 849 aa20.69■□□□□ 0.9
SOD1-201ENST00000270142 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
SOD1-201ENST00000270142 N4BP2Q86UW6 1770 aaPredicted RBP20.68■□□□□ 0.9
SOD1-201ENST00000270142 MTHFSDQ2M296 383 aaKnown RBP20.68■□□□□ 0.9
SOD1-201ENST00000270142 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
SOD1-201ENST00000270142 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
SOD1-201ENST00000270142 SLC39A6Q13433 755 aa20.67■□□□□ 0.9
SOD1-201ENST00000270142 INTS5Q6P9B9 1019 aaKnown RBP20.67■□□□□ 0.9
SOD1-201ENST00000270142 DNAJC10Q8IXB1 793 aa20.67■□□□□ 0.9
SOD1-201ENST00000270142 ZNF526Q8TF50 670 aaPredicted RBP20.67■□□□□ 0.9
SOD1-201ENST00000270142 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
SOD1-201ENST00000270142 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
SOD1-201ENST00000270142 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
SOD1-201ENST00000270142 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
SOD1-201ENST00000270142 FKBP8Q14318 412 aa20.66■□□□□ 0.9
SOD1-201ENST00000270142 BCS1LQ9Y276 419 aa20.66■□□□□ 0.9
SOD1-201ENST00000270142 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
SOD1-201ENST00000270142 KCPQ6ZWJ8 1503 aa20.65■□□□□ 0.9
SOD1-201ENST00000270142 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
SOD1-201ENST00000270142 DPEP1P16444 411 aa20.65■□□□□ 0.9
SOD1-201ENST00000270142 DDR1Q08345 913 aa20.63■□□□□ 0.89
SOD1-201ENST00000270142 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
SOD1-201ENST00000270142 CYP19A1P11511 503 aaPredicted RBP20.62■□□□□ 0.89
SOD1-201ENST00000270142 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
SOD1-201ENST00000270142 KCNA3P22001 575 aa20.61■□□□□ 0.89
SOD1-201ENST00000270142 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
SOD1-201ENST00000270142 FCHSD2O94868 740 aa20.6■□□□□ 0.89
SOD1-201ENST00000270142 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
SOD1-201ENST00000270142 ZBTB1Q9Y2K1 713 aa20.6■□□□□ 0.89
SOD1-201ENST00000270142 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
SOD1-201ENST00000270142 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
SOD1-201ENST00000270142 ZPR1O75312 459 aa20.58■□□□□ 0.89
SOD1-201ENST00000270142 TM4SF1P30408 202 aa20.58■□□□□ 0.89
SOD1-201ENST00000270142 COL15A1P39059 1388 aa20.58■□□□□ 0.88
SOD1-201ENST00000270142 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
SOD1-201ENST00000270142 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
SOD1-201ENST00000270142 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
SOD1-201ENST00000270142 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms