RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.26
VAMP7-201ENST00000262640 DISP2A7MBM2 1401 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 SLIT2O94813 1529 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 MRC1P22897 1456 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
VAMP7-201ENST00000262640 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 SLC52A2Q9HAB3 445 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
VAMP7-201ENST00000262640 TRIM27P14373 513 aa16.63■□□□□ 0.25
VAMP7-201ENST00000262640 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
VAMP7-201ENST00000262640 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
VAMP7-201ENST00000262640 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
VAMP7-201ENST00000262640 HOXB7P09629 217 aa16.62■□□□□ 0.25
VAMP7-201ENST00000262640 RLBP1P12271 317 aa16.62■□□□□ 0.25
VAMP7-201ENST00000262640 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
VAMP7-201ENST00000262640 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
VAMP7-201ENST00000262640 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
VAMP7-201ENST00000262640 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
VAMP7-201ENST00000262640 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
VAMP7-201ENST00000262640 HSPA1LP34931 641 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 AAMPQ13685 434 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 SPATA31A1Q5TZJ5 1347 aa16.61■□□□□ 0.25
VAMP7-201ENST00000262640 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
VAMP7-201ENST00000262640 SHANK3Q9BYB0 1731 aa16.6■□□□□ 0.25
VAMP7-201ENST00000262640 KCNQ3O43525 872 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
VAMP7-201ENST00000262640 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
VAMP7-201ENST00000262640 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 CABP4P57796 275 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
VAMP7-201ENST00000262640 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
VAMP7-201ENST00000262640 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
VAMP7-201ENST00000262640 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.25
VAMP7-201ENST00000262640 NGLY1Q96IV0 654 aa16.58■□□□□ 0.25
VAMP7-201ENST00000262640 WNK3Q9BYP7 1800 aa16.58■□□□□ 0.24
VAMP7-201ENST00000262640 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
VAMP7-201ENST00000262640 PTPRCP08575 1304 aa16.58■□□□□ 0.24
VAMP7-201ENST00000262640 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
VAMP7-201ENST00000262640 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
VAMP7-201ENST00000262640 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
VAMP7-201ENST00000262640 LRP6O75581 1613 aa16.57■□□□□ 0.24
VAMP7-201ENST00000262640 EXOC5O00471 708 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
VAMP7-201ENST00000262640 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 ABCC4O15439 1325 aa16.56■□□□□ 0.24
VAMP7-201ENST00000262640 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
VAMP7-201ENST00000262640 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
VAMP7-201ENST00000262640 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
VAMP7-201ENST00000262640 BCL9LQ86UU0 1499 aa16.55■□□□□ 0.24
VAMP7-201ENST00000262640 VPS72Q15906 364 aa16.55■□□□□ 0.24
VAMP7-201ENST00000262640 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
VAMP7-201ENST00000262640 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
VAMP7-201ENST00000262640 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
VAMP7-201ENST00000262640 NECTIN2Q92692 538 aa16.53■□□□□ 0.24
VAMP7-201ENST00000262640 RGS12O14924 1447 aa16.52■□□□□ 0.24
VAMP7-201ENST00000262640 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.24
VAMP7-201ENST00000262640 MEX3CQ5U5Q3 659 aaKnown RBP16.52■□□□□ 0.24
VAMP7-201ENST00000262640 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
VAMP7-201ENST00000262640 DDB1Q16531 1140 aa16.52■□□□□ 0.23
VAMP7-201ENST00000262640 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.23
VAMP7-201ENST00000262640 G2E3Q7L622 706 aa16.51■□□□□ 0.23
VAMP7-201ENST00000262640 USP21Q9UK80 565 aa16.51■□□□□ 0.23
VAMP7-201ENST00000262640 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
VAMP7-201ENST00000262640 FLIIQ13045 1269 aa16.51■□□□□ 0.23
VAMP7-201ENST00000262640 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
VAMP7-201ENST00000262640 CACNA1FO60840 1977 aa16.5■□□□□ 0.23
VAMP7-201ENST00000262640 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
VAMP7-201ENST00000262640 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
VAMP7-201ENST00000262640 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
VAMP7-201ENST00000262640 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
VAMP7-201ENST00000262640 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
VAMP7-201ENST00000262640 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
VAMP7-201ENST00000262640 PAPPAQ13219 1627 aa16.49■□□□□ 0.23
VAMP7-201ENST00000262640 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
VAMP7-201ENST00000262640 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
VAMP7-201ENST00000262640 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
VAMP7-201ENST00000262640 FKBP5Q13451 457 aaPredicted RBP16.47■□□□□ 0.23
VAMP7-201ENST00000262640 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
VAMP7-201ENST00000262640 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
VAMP7-201ENST00000262640 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.23
VAMP7-201ENST00000262640 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
VAMP7-201ENST00000262640 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
VAMP7-201ENST00000262640 C5P01031 1676 aa16.46■□□□□ 0.23
VAMP7-201ENST00000262640 KCPQ6ZWJ8 1503 aa16.46■□□□□ 0.23
VAMP7-201ENST00000262640 GLI3P10071 1580 aa16.46■□□□□ 0.22
VAMP7-201ENST00000262640 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
VAMP7-201ENST00000262640 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
VAMP7-201ENST00000262640 AFF2P51816 1311 aa16.45■□□□□ 0.22
VAMP7-201ENST00000262640 PIGBQ92521 554 aa16.45■□□□□ 0.22
VAMP7-201ENST00000262640 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
VAMP7-201ENST00000262640 DDX21Q9NR30 783 aaKnown RBP eCLIP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms