RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 XBP1P17861 261 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 KIF4BQ2VIQ3 1234 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 ZSWIM4Q9H7M6 989 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 SMTNL1A8MU46 457 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 TMX4Q9H1E5 349 aaPredicted RBP11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 DACH1Q9UI36 760 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 SEC24BO95487 1268 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
CTDSPL2-201ENST00000260327 ANKRD62A6NC57 917 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 RBM33Q96EV2 1170 aaKnown RBP11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 KIAA1328Q86T90 577 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 MYL6BP14649 208 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 ZSCAN12O43309 604 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 TSHZ3Q63HK5 1081 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 RAI14Q9P0K7 980 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 ZSCAN31Q96LW9 406 aaPredicted RBP11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 TNNQ9UQP3 1299 aa11.41□□□□□ -0.58
CTDSPL2-201ENST00000260327 TCEAL9Q9UHQ7 104 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 LRSAM1Q6UWE0 723 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 TANGO6Q9C0B7 1094 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 AMOTL1Q8IY63 956 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
CTDSPL2-201ENST00000260327 BMP2KLQ5H9B9 411 aa11.4□□□□□ -0.59
CTDSPL2-201ENST00000260327 GIMAP6Q6P9H5 292 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 TMC6Q7Z403 805 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 KIF5CO60282 957 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 RSPH14Q9UHP6 348 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 TOP1P11387 765 aaKnown RBP11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
CTDSPL2-201ENST00000260327 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 SMAP1Q8IYB5 467 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 TXLNBQ8N3L3 684 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 CPLX3Q8WVH0 158 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 LIG1P18858 919 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 TXLNAP40222 546 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 SEPT7Q16181 437 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 TTC39AQ5SRH9 613 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 CCDC113Q9H0I3 377 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 BCCIPQ9P287 314 aaKnown RBP eCLIP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 DNA2P51530 1060 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 PAXBP1Q9Y5B6 917 aa11.38□□□□□ -0.59
CTDSPL2-201ENST00000260327 GOLGA6L10A0A0M3HER8 536 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 GUCY1B3Q02153 619 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 SART3Q15020 963 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 MAP9Q49MG5 647 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 KLHL10Q6JEL2 608 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 WAPLQ7Z5K2 1190 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 CDK5RAP3Q96JB5 506 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 BIN1O00499 593 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 CTR9Q6PD62 1173 aa11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 ZNF692Q9BU19 519 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-201ENST00000260327 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 SPG7Q9UQ90 795 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 NUCB1Q02818 461 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 ATP2C2O75185 946 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 MAP2K1Q02750 393 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 BOLA2Q9H3K6 86 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.597e-13■■■■■ 64.1
CTDSPL2-201ENST00000260327 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
CTDSPL2-201ENST00000260327 FBLN1P23142 703 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 ESCO1Q5FWF5 840 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 RLBP1P12271 317 aa11.35□□□□□ -0.59
CTDSPL2-201ENST00000260327 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms