RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 NLRP3Q96P20 1036 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 LRRCC1Q9C099 1032 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 ARHGAP31Q2M1Z3 1444 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 KRT32Q14532 448 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
PRPF38A-201ENST00000257181 SHROOM2Q13796 1616 aa16.08■□□□□ 0.17
PRPF38A-201ENST00000257181 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.17
PRPF38A-201ENST00000257181 BCL2L13Q9BXK5 485 aa16.08■□□□□ 0.17
PRPF38A-201ENST00000257181 THRAP3Q9Y2W1 955 aaKnown RBP16.08■□□□□ 0.17
PRPF38A-201ENST00000257181 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 HLA-DOAP06340 250 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 WASF1Q92558 559 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.161e-8■■□□□ 12.7
PRPF38A-201ENST00000257181 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
PRPF38A-201ENST00000257181 TPM3P06753 285 aa16.07■□□□□ 0.16
PRPF38A-201ENST00000257181 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
PRPF38A-201ENST00000257181 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
PRPF38A-201ENST00000257181 DZIP1Q86YF9 867 aaKnown RBP16.07■□□□□ 0.16
PRPF38A-201ENST00000257181 COG6Q9Y2V7 657 aa16.07■□□□□ 0.16
PRPF38A-201ENST00000257181 TXLNAP40222 546 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 FYB1O15117 783 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 ERVK-7P63135 1459 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 TNNI2P48788 182 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 ZNF804AQ7Z570 1209 aa16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 RNF41Q9H4P4 317 aaPredicted RBP16.06■□□□□ 0.16
PRPF38A-201ENST00000257181 GLI2P10070 1586 aa16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
PRPF38A-201ENST00000257181 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 PLCG2P16885 1265 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 PDCP20941 246 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 PLEKHH1Q9ULM0 1364 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 ANKARQ7Z5J8 1434 aa16.04■□□□□ 0.16
PRPF38A-201ENST00000257181 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 MAST3O60307 1309 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 KIF1BPQ96EK5 621 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 KIF24Q5T7B8 1368 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 FAM135BQ49AJ0 1406 aa16.03■□□□□ 0.16
PRPF38A-201ENST00000257181 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
PRPF38A-201ENST00000257181 USP5P45974 858 aa16.02■□□□□ 0.16
PRPF38A-201ENST00000257181 MYD88Q99836 296 aa16.02■□□□□ 0.16
PRPF38A-201ENST00000257181 CCDC69A6NI79 296 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 HOXB7P09629 217 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 AIDAQ96BJ3 306 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
PRPF38A-201ENST00000257181 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
PRPF38A-201ENST00000257181 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 BEGAINQ9BUH8 593 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
PRPF38A-201ENST00000257181 TDO2P48775 406 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 SKOR2Q2VWA4 1001 aaPredicted RBP16■□□□□ 0.15
PRPF38A-201ENST00000257181 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 CERKQ8TCT0 537 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 CDK5RAP3Q96JB5 506 aa16■□□□□ 0.15
PRPF38A-201ENST00000257181 PLCB2Q00722 1185 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 ABCA9Q8IUA7 1624 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 ADCY10Q96PN6 1610 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 JMYQ8N9B5 988 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 CUL5Q93034 780 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
PRPF38A-201ENST00000257181 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 MYOM2P54296 1465 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms