RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TRIM27P14373 513 aa23.9■■□□□ 1.42
TNFSF9-201ENST00000245817 ARHGAP45Q92619 1136 aa23.9■■□□□ 1.42
TNFSF9-201ENST00000245817 USP35Q9P2H5 1018 aa23.9■■□□□ 1.42
TNFSF9-201ENST00000245817 TCERG1O14776 1098 aaKnown RBP23.89■■□□□ 1.42
TNFSF9-201ENST00000245817 DCAF5Q96JK2 942 aa23.89■■□□□ 1.42
TNFSF9-201ENST00000245817 USP21Q9UK80 565 aa23.89■■□□□ 1.42
TNFSF9-201ENST00000245817 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
TNFSF9-201ENST00000245817 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
TNFSF9-201ENST00000245817 AAMPQ13685 434 aa23.89■■□□□ 1.41
TNFSF9-201ENST00000245817 CHMP4AQ9BY43 222 aa23.89■■□□□ 1.41
TNFSF9-201ENST00000245817 AFF2P51816 1311 aa23.89■■□□□ 1.41
TNFSF9-201ENST00000245817 SLIT2O94813 1529 aa23.88■■□□□ 1.41
TNFSF9-201ENST00000245817 UNC5CLQ8IV45 518 aa23.88■■□□□ 1.41
TNFSF9-201ENST00000245817 CYP27B1O15528 508 aa23.87■■□□□ 1.41
TNFSF9-201ENST00000245817 RLBP1P12271 317 aa23.87■■□□□ 1.41
TNFSF9-201ENST00000245817 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
TNFSF9-201ENST00000245817 PLCH1Q4KWH8 1693 aa23.87■■□□□ 1.41
TNFSF9-201ENST00000245817 STK31Q9BXU1 1019 aa23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 NWD2Q9ULI1 1742 aa23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 CCDC30Q5VVM6 783 aa23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 API5Q9BZZ5 524 aaKnown RBP23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 PARP4Q9UKK3 1724 aaKnown RBP23.86■■□□□ 1.41
TNFSF9-201ENST00000245817 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
TNFSF9-201ENST00000245817 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
TNFSF9-201ENST00000245817 BCL9LQ86UU0 1499 aa23.84■■□□□ 1.41
TNFSF9-201ENST00000245817 SLC4A2P04920 1241 aa23.83■■□□□ 1.41
TNFSF9-201ENST00000245817 ZNF772Q68DY9 489 aaPredicted RBP23.83■■□□□ 1.41
TNFSF9-201ENST00000245817 ITPRIPQ8IWB1 547 aa23.83■■□□□ 1.41
TNFSF9-201ENST00000245817 PKD1L3Q7Z443 1732 aa23.83■■□□□ 1.41
TNFSF9-201ENST00000245817 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.4
TNFSF9-201ENST00000245817 DDX19BQ9UMR2 479 aa23.83■■□□□ 1.4
TNFSF9-201ENST00000245817 HOXB7P09629 217 aa23.82■■□□□ 1.4
TNFSF9-201ENST00000245817 CABP4P57796 275 aa23.82■■□□□ 1.4
TNFSF9-201ENST00000245817 KDM6AO15550 1401 aaPredicted RBP23.82■■□□□ 1.4
TNFSF9-201ENST00000245817 NFATC2IPQ8NCF5 419 aa23.81■■□□□ 1.4
TNFSF9-201ENST00000245817 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
TNFSF9-201ENST00000245817 TRPC5Q9UL62 973 aaPredicted RBP23.8■■□□□ 1.4
TNFSF9-201ENST00000245817 CCDC9Q9Y3X0 531 aaKnown RBP23.8■■□□□ 1.4
TNFSF9-201ENST00000245817 PTPRCP08575 1304 aa23.8■■□□□ 1.4
TNFSF9-201ENST00000245817 KCNQ3O43525 872 aa23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 HDGFL1Q5TGJ6 251 aa23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 QTRT2Q9H974 415 aaKnown RBP23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 VPS72Q15906 364 aa23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 ADAMTS7Q9UKP4 1686 aa23.79■■□□□ 1.4
TNFSF9-201ENST00000245817 NRAPQ86VF7 1730 aa23.78■■□□□ 1.4
TNFSF9-201ENST00000245817 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 TTC5Q8N0Z6 440 aa23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 NECTIN2Q92692 538 aa23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 CDCA7Q9BWT1 371 aaPredicted RBP23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 THRAP3Q9Y2W1 955 aaKnown RBP23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.77■■□□□ 1.4
TNFSF9-201ENST00000245817 ERVV-2B6SEH9 535 aa23.76■■□□□ 1.39
TNFSF9-201ENST00000245817 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
TNFSF9-201ENST00000245817 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
TNFSF9-201ENST00000245817 KDM3BQ7LBC6 1761 aa23.75■■□□□ 1.39
TNFSF9-201ENST00000245817 EXOC5O00471 708 aa23.75■■□□□ 1.39
TNFSF9-201ENST00000245817 RGS17Q9UGC6 210 aaPredicted RBP23.75■■□□□ 1.39
TNFSF9-201ENST00000245817 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
TNFSF9-201ENST00000245817 CENPQQ7L2Z9 268 aaPredicted RBP23.74■■□□□ 1.39
TNFSF9-201ENST00000245817 ABCC4O15439 1325 aa23.74■■□□□ 1.39
TNFSF9-201ENST00000245817 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
TNFSF9-201ENST00000245817 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
TNFSF9-201ENST00000245817 SLC39A6Q13433 755 aa23.73■■□□□ 1.39
TNFSF9-201ENST00000245817 GJD4Q96KN9 370 aaPredicted RBP23.73■■□□□ 1.39
TNFSF9-201ENST00000245817 VIRMAQ69YN4 1812 aaKnown RBP23.73■■□□□ 1.39
TNFSF9-201ENST00000245817 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
TNFSF9-201ENST00000245817 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
TNFSF9-201ENST00000245817 ATRNO75882 1429 aa23.72■■□□□ 1.39
TNFSF9-201ENST00000245817 MRC1P22897 1456 aa23.72■■□□□ 1.39
TNFSF9-201ENST00000245817 DISP2A7MBM2 1401 aa23.71■■□□□ 1.39
TNFSF9-201ENST00000245817 FLIIQ13045 1269 aa23.7■■□□□ 1.39
TNFSF9-201ENST00000245817 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.38
TNFSF9-201ENST00000245817 FKBP5Q13451 457 aaPredicted RBP23.7■■□□□ 1.38
TNFSF9-201ENST00000245817 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
TNFSF9-201ENST00000245817 G2E3Q7L622 706 aa23.69■■□□□ 1.38
TNFSF9-201ENST00000245817 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
TNFSF9-201ENST00000245817 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
TNFSF9-201ENST00000245817 DBF4Q9UBU7 674 aaPredicted RBP23.68■■□□□ 1.38
TNFSF9-201ENST00000245817 INTS3Q68E01 1043 aaKnown RBP23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 POTEAQ6S8J7 498 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 RWDD1Q9H446 243 aaPredicted RBP23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 KDM2BQ8NHM5 1336 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 SNRPA1P09661 255 aaKnown RBP23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 RXRBP28702 533 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 DDB1Q16531 1140 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 ZBTB40Q9NUA8 1239 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 TMOD3Q9NYL9 352 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
TNFSF9-201ENST00000245817 ZBTB7BO15156 539 aaPredicted RBP23.66■■□□□ 1.38
TNFSF9-201ENST00000245817 SLC4A10Q6U841 1118 aa23.66■■□□□ 1.38
TNFSF9-201ENST00000245817 BARGINQ6ZT62 677 aa23.66■■□□□ 1.38
TNFSF9-201ENST00000245817 ZNF496Q96IT1 587 aaPredicted RBP23.66■■□□□ 1.38
TNFSF9-201ENST00000245817 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
TNFSF9-201ENST00000245817 CCT4P50991 539 aaKnown RBP23.65■■□□□ 1.38
TNFSF9-201ENST00000245817 FAM98CQ17RN3 349 aaKnown RBP23.65■■□□□ 1.38
TNFSF9-201ENST00000245817 IGHDP01880 384 aa23.63■■□□□ 1.37
TNFSF9-201ENST00000245817 RGS12O14924 1447 aa23.63■■□□□ 1.37
TNFSF9-201ENST00000245817 TNS2Q63HR2 1409 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms