RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
IRF1-201ENST00000245414 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 TMX3Q96JJ7 454 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
IRF1-201ENST00000245414 BRD1O95696 1058 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
IRF1-201ENST00000245414 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 SAFB2Q14151 953 aaKnown RBP eCLIP11.57□□□□□ -0.56
IRF1-201ENST00000245414 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 FAM135AQ9P2D6 1515 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 APBB1O00213 710 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 MNAT1P51948 309 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 SKIDA1Q1XH10 827 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 FAM43BQ6ZT52 329 aaPredicted RBP11.57□□□□□ -0.56
IRF1-201ENST00000245414 FBXO18Q8NFZ0 1043 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
IRF1-201ENST00000245414 UBXN4Q92575 508 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 USP26Q9BXU7 913 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 ADCY10Q96PN6 1610 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 LUZP1Q86V48 1076 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 DNAAF4Q8WXU2 420 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 MAGEA9P43362 315 aa11.56□□□□□ -0.56
IRF1-201ENST00000245414 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 IPO8O15397 1037 aaKnown RBP11.55□□□□□ -0.56
IRF1-201ENST00000245414 FILIP1Q7Z7B0 1213 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 RPAINQ86UA6 219 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 FAM53CQ9NYF3 392 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 ATP10BO94823 1461 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 CCDC171Q6TFL3 1326 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
IRF1-201ENST00000245414 GNL2Q13823 731 aaKnown RBP11.55□□□□□ -0.56
IRF1-201ENST00000245414 RNF217Q8TC41 542 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
IRF1-201ENST00000245414 KIF1CO43896 1103 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 CALRP27797 417 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 GRIPAP1Q4V328 841 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 ZBTB40Q9NUA8 1239 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 PTPRCP08575 1304 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 SEC31AO94979 1220 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 CAMK4Q16566 473 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 CACTINQ8WUQ7 758 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 SYTL4Q96C24 671 aaPredicted RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
IRF1-201ENST00000245414 GPRASP1Q5JY77 1395 aa11.54□□□□□ -0.56
IRF1-201ENST00000245414 IVLP07476 585 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 UBE2HP62256 183 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 CEP120Q8N960 986 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 USP27XA6NNY8 438 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 ZRSR1Q15695 479 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 SKILP12757 684 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 BIRC2Q13490 618 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 SMC1AQ14683 1233 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
IRF1-201ENST00000245414 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
IRF1-201ENST00000245414 E9PCH4 1651 aa11.52□□□□□ -0.56
IRF1-201ENST00000245414 HOMER1Q86YM7 354 aa11.52□□□□□ -0.56
IRF1-201ENST00000245414 PTPRGP23470 1445 aa11.52□□□□□ -0.56
IRF1-201ENST00000245414 ACTN2P35609 894 aa11.52□□□□□ -0.57
IRF1-201ENST00000245414 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.57
IRF1-201ENST00000245414 MAGI2Q86UL8 1455 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 KIF2AO00139 706 aaPredicted RBP11.51□□□□□ -0.57
IRF1-201ENST00000245414 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 MED4Q9NPJ6 270 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 ITSN2Q9NZM3 1697 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 GOLGA6L4A6NEF3 574 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 H2AFXP16104 143 aaPredicted RBP11.51□□□□□ -0.57
IRF1-201ENST00000245414 GIMAP7Q8NHV1 300 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 ATG3Q9NT62 314 aa11.51□□□□□ -0.57
IRF1-201ENST00000245414 GOLGA6L19H0YKK7 550 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 MMS22LQ6ZRQ5 1243 aa11.5□□□□□ -0.57
IRF1-201ENST00000245414 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms