RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KIAA1551Q9HCM1 1747 aa19.15■□□□□ 0.66
DDX39A-201ENST00000242776 PXDNLA1KZ92 1463 aa19.15■□□□□ 0.66
DDX39A-201ENST00000242776 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
DDX39A-201ENST00000242776 ATG3Q9NT62 314 aa19.15■□□□□ 0.66
DDX39A-201ENST00000242776 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
DDX39A-201ENST00000242776 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
DDX39A-201ENST00000242776 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.65
DDX39A-201ENST00000242776 PHKG2P15735 406 aa19.13■□□□□ 0.65
DDX39A-201ENST00000242776 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-201ENST00000242776 IFNL2Q8IZJ0 200 aa19.12■□□□□ 0.65
DDX39A-201ENST00000242776 NMRK2Q9NPI5 230 aa19.12■□□□□ 0.65
DDX39A-201ENST00000242776 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
DDX39A-201ENST00000242776 TRAPPC3LQ5T215 181 aa19.11■□□□□ 0.65
DDX39A-201ENST00000242776 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
DDX39A-201ENST00000242776 RTCBQ9Y3I0 505 aaKnown RBP19.11■□□□□ 0.65
DDX39A-201ENST00000242776 FCHSD2O94868 740 aa19.1■□□□□ 0.65
DDX39A-201ENST00000242776 DPEP1P16444 411 aa19.1■□□□□ 0.65
DDX39A-201ENST00000242776 APLP1P51693 650 aa19.1■□□□□ 0.65
DDX39A-201ENST00000242776 NCAPD2Q15021 1401 aa19.1■□□□□ 0.65
DDX39A-201ENST00000242776 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
DDX39A-201ENST00000242776 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
DDX39A-201ENST00000242776 HTRA3P83110 453 aa19.09■□□□□ 0.65
DDX39A-201ENST00000242776 ARHGEF1Q92888 912 aaKnown RBP19.09■□□□□ 0.65
DDX39A-201ENST00000242776 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
DDX39A-201ENST00000242776 C4AP0C0L4 1744 aa19.08■□□□□ 0.64
DDX39A-201ENST00000242776 TOMM70O94826 608 aa19.08■□□□□ 0.64
DDX39A-201ENST00000242776 TGFB2P61812 414 aa19.08■□□□□ 0.64
DDX39A-201ENST00000242776 RFC4P35249 363 aa19.07■□□□□ 0.64
DDX39A-201ENST00000242776 NLGN1Q8N2Q7 840 aa19.07■□□□□ 0.64
DDX39A-201ENST00000242776 CCDC87Q9NVE4 849 aa19.07■□□□□ 0.64
DDX39A-201ENST00000242776 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
DDX39A-201ENST00000242776 PARP3Q9Y6F1 533 aa19.07■□□□□ 0.64
DDX39A-201ENST00000242776 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
DDX39A-201ENST00000242776 COL5A3P25940 1745 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-201ENST00000242776 C10orf71Q711Q0 1435 aa19.06■□□□□ 0.64
DDX39A-201ENST00000242776 MYH14Q7Z406 1995 aaKnown RBP19.06■□□□□ 0.64
DDX39A-201ENST00000242776 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
DDX39A-201ENST00000242776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDX39A-201ENST00000242776 KDRP35968 1356 aa19.05■□□□□ 0.64
DDX39A-201ENST00000242776 WDR90Q96KV7 1748 aa19.05■□□□□ 0.64
DDX39A-201ENST00000242776 GYS1P13807 737 aa19.05■□□□□ 0.64
DDX39A-201ENST00000242776 C9orf131Q5VYM1 1079 aa19.05■□□□□ 0.64
DDX39A-201ENST00000242776 C16orf71Q8IYS4 520 aaPredicted RBP19.04■□□□□ 0.64
DDX39A-201ENST00000242776 DNAJC5GQ8N7S2 189 aa19.04■□□□□ 0.64
DDX39A-201ENST00000242776 PTCD1O75127 700 aaKnown RBP19.03■□□□□ 0.64
DDX39A-201ENST00000242776 SRP68Q9UHB9 627 aaKnown RBP19.03■□□□□ 0.64
DDX39A-201ENST00000242776 ARFGEF1Q9Y6D6 1849 aa19.02■□□□□ 0.64
DDX39A-201ENST00000242776 RPS6KA4O75676 772 aa19.02■□□□□ 0.63
DDX39A-201ENST00000242776 CABP4P57796 275 aa19.02■□□□□ 0.63
DDX39A-201ENST00000242776 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-201ENST00000242776 KCPQ6ZWJ8 1503 aa19.01■□□□□ 0.63
DDX39A-201ENST00000242776 ERVV-2B6SEH9 535 aa19■□□□□ 0.63
DDX39A-201ENST00000242776 KCNA3P22001 575 aa19■□□□□ 0.63
DDX39A-201ENST00000242776 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
DDX39A-201ENST00000242776 RNF181Q9P0P0 153 aa19■□□□□ 0.63
DDX39A-201ENST00000242776 CNTNAP4Q9C0A0 1308 aa19■□□□□ 0.63
DDX39A-201ENST00000242776 CAPN15O75808 1086 aa18.99■□□□□ 0.63
DDX39A-201ENST00000242776 ADRA2BP18089 450 aa18.99■□□□□ 0.63
DDX39A-201ENST00000242776 CHRNA5P30532 468 aa18.99■□□□□ 0.63
DDX39A-201ENST00000242776 PIM2Q9P1W9 311 aa18.99■□□□□ 0.63
DDX39A-201ENST00000242776 ZNF831Q5JPB2 1677 aa18.99■□□□□ 0.63
DDX39A-201ENST00000242776 KDM6AO15550 1401 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-201ENST00000242776 FKBP8Q14318 412 aa18.98■□□□□ 0.63
DDX39A-201ENST00000242776 PLEKHO1Q53GL0 409 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-201ENST00000242776 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
DDX39A-201ENST00000242776 RRAGCQ9HB90 399 aa18.98■□□□□ 0.63
DDX39A-201ENST00000242776 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
DDX39A-201ENST00000242776 DALRD3Q5D0E6 543 aaKnown RBP18.97■□□□□ 0.63
DDX39A-201ENST00000242776 RBM46Q8TBY0 533 aaKnown RBP18.97■□□□□ 0.63
DDX39A-201ENST00000242776 SBF1O95248 1867 aa18.97■□□□□ 0.63
DDX39A-201ENST00000242776 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
DDX39A-201ENST00000242776 DDR1Q08345 913 aa18.97■□□□□ 0.63
DDX39A-201ENST00000242776 MTHFSP49914 203 aa18.96■□□□□ 0.63
DDX39A-201ENST00000242776 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
DDX39A-201ENST00000242776 TJP1Q07157 1748 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 PLEKHG2Q9H7P9 1386 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 KDM2BQ8NHM5 1336 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 COL13A1Q5TAT6 717 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-201ENST00000242776 NFATC2IPQ8NCF5 419 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 KLRG1Q96E93 195 aa18.95■□□□□ 0.62
DDX39A-201ENST00000242776 USP42Q9H9J4 1324 aaKnown RBP18.93■□□□□ 0.62
DDX39A-201ENST00000242776 RASSF7Q02833 373 aa18.93■□□□□ 0.62
DDX39A-201ENST00000242776 CCDC88AQ3V6T2 1871 aa18.92■□□□□ 0.62
DDX39A-201ENST00000242776 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
DDX39A-201ENST00000242776 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
DDX39A-201ENST00000242776 FSTL1Q12841 308 aa18.9■□□□□ 0.62
DDX39A-201ENST00000242776 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
DDX39A-201ENST00000242776 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
DDX39A-201ENST00000242776 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
DDX39A-201ENST00000242776 POLRMTO00411 1230 aaKnown RBP18.9■□□□□ 0.62
DDX39A-201ENST00000242776 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
DDX39A-201ENST00000242776 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
DDX39A-201ENST00000242776 SCN11AQ9UI33 1791 aa18.89■□□□□ 0.61
DDX39A-201ENST00000242776 ZPR1O75312 459 aa18.89■□□□□ 0.61
DDX39A-201ENST00000242776 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
DDX39A-201ENST00000242776 PANK3Q9H999 370 aa18.88■□□□□ 0.61
DDX39A-201ENST00000242776 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
DDX39A-201ENST00000242776 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
DDX39A-201ENST00000242776 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms