RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 COL5A3P25940 1745 aaPredicted RBP21.72■■□□□ 1.07
ERCC1-201ENST00000013807 ITPK1Q13572 414 aa21.71■■□□□ 1.07
ERCC1-201ENST00000013807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
ERCC1-201ENST00000013807 PER1O15534 1290 aaPredicted RBP21.7■■□□□ 1.06
ERCC1-201ENST00000013807 KIF7Q2M1P5 1343 aa21.7■■□□□ 1.06
ERCC1-201ENST00000013807 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
ERCC1-201ENST00000013807 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
ERCC1-201ENST00000013807 MSL1Q68DK7 614 aa21.69■■□□□ 1.06
ERCC1-201ENST00000013807 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
ERCC1-201ENST00000013807 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
ERCC1-201ENST00000013807 IL13P35225 146 aa21.68■■□□□ 1.06
ERCC1-201ENST00000013807 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
ERCC1-201ENST00000013807 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
ERCC1-201ENST00000013807 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
ERCC1-201ENST00000013807 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
ERCC1-201ENST00000013807 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
ERCC1-201ENST00000013807 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
ERCC1-201ENST00000013807 SLC4A9Q96Q91 983 aa21.66■■□□□ 1.06
ERCC1-201ENST00000013807 KIF13BQ9NQT8 1826 aa21.65■■□□□ 1.06
ERCC1-201ENST00000013807 ZNF530Q6P9A1 599 aaPredicted RBP21.65■■□□□ 1.06
ERCC1-201ENST00000013807 YBX3P16989 372 aaKnown RBP eCLIP21.64■■□□□ 1.053e-8■□□□□ 9.1
ERCC1-201ENST00000013807 SULT6B1Q6IMI4 303 aa21.64■■□□□ 1.05
ERCC1-201ENST00000013807 GNPATO15228 680 aa21.63■■□□□ 1.05
ERCC1-201ENST00000013807 PHF14O94880 888 aa21.63■■□□□ 1.05
ERCC1-201ENST00000013807 MTHFSP49914 203 aa21.63■■□□□ 1.05
ERCC1-201ENST00000013807 SMIM5Q71RC9 77 aa21.63■■□□□ 1.05
ERCC1-201ENST00000013807 CABP4P57796 275 aa21.62■■□□□ 1.05
ERCC1-201ENST00000013807 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
ERCC1-201ENST00000013807 CNTNAP4Q9C0A0 1308 aa21.61■■□□□ 1.05
ERCC1-201ENST00000013807 ADRA2BP18089 450 aa21.61■■□□□ 1.05
ERCC1-201ENST00000013807 C1orf141Q5JVX7 400 aa21.61■■□□□ 1.05
ERCC1-201ENST00000013807 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
ERCC1-201ENST00000013807 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
ERCC1-201ENST00000013807 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
ERCC1-201ENST00000013807 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
ERCC1-201ENST00000013807 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
ERCC1-201ENST00000013807 C4AP0C0L4 1744 aa21.58■■□□□ 1.05
ERCC1-201ENST00000013807 RPS6KA4O75676 772 aa21.58■■□□□ 1.05
ERCC1-201ENST00000013807 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.05
ERCC1-201ENST00000013807 RBM42Q9BTD8 480 aaKnown RBP21.58■■□□□ 1.05
ERCC1-201ENST00000013807 TJP1Q07157 1748 aa21.58■■□□□ 1.04
ERCC1-201ENST00000013807 NLGN1Q8N2Q7 840 aa21.57■■□□□ 1.04
ERCC1-201ENST00000013807 KIAA1551Q9HCM1 1747 aa21.57■■□□□ 1.04
ERCC1-201ENST00000013807 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
ERCC1-201ENST00000013807 MRC1P22897 1456 aa21.55■■□□□ 1.04
ERCC1-201ENST00000013807 MMP10P09238 476 aa21.53■■□□□ 1.04
ERCC1-201ENST00000013807 BRCA1P38398 1863 aaKnown RBP21.53■■□□□ 1.04
ERCC1-201ENST00000013807 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
ERCC1-201ENST00000013807 GYS1P13807 737 aa21.52■■□□□ 1.04
ERCC1-201ENST00000013807 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
ERCC1-201ENST00000013807 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
ERCC1-201ENST00000013807 PTCD1O75127 700 aaKnown RBP21.51■■□□□ 1.03
ERCC1-201ENST00000013807 TGFB2P61812 414 aa21.51■■□□□ 1.03
ERCC1-201ENST00000013807 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
ERCC1-201ENST00000013807 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
ERCC1-201ENST00000013807 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
ERCC1-201ENST00000013807 RFC4P35249 363 aa21.5■■□□□ 1.03
ERCC1-201ENST00000013807 CC2D1BQ5T0F9 858 aaKnown RBP21.5■■□□□ 1.03
ERCC1-201ENST00000013807 UBR2Q8IWV8 1755 aa21.49■■□□□ 1.03
ERCC1-201ENST00000013807 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
ERCC1-201ENST00000013807 HMOX1P09601 288 aa21.49■■□□□ 1.03
ERCC1-201ENST00000013807 CRKLP46109 303 aaKnown RBP21.49■■□□□ 1.03
ERCC1-201ENST00000013807 ADCY9O60503 1353 aa21.48■■□□□ 1.03
ERCC1-201ENST00000013807 C10orf71Q711Q0 1435 aa21.48■■□□□ 1.03
ERCC1-201ENST00000013807 PXDNLA1KZ92 1463 aa21.48■■□□□ 1.03
ERCC1-201ENST00000013807 MTHFSDQ2M296 383 aaKnown RBP21.48■■□□□ 1.03
ERCC1-201ENST00000013807 INTS5Q6P9B9 1019 aaKnown RBP21.47■■□□□ 1.03
ERCC1-201ENST00000013807 KCPQ6ZWJ8 1503 aa21.46■■□□□ 1.03
ERCC1-201ENST00000013807 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
ERCC1-201ENST00000013807 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
ERCC1-201ENST00000013807 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.03
ERCC1-201ENST00000013807 GIGYF1O75420 1035 aaPredicted RBP21.44■■□□□ 1.02
ERCC1-201ENST00000013807 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
ERCC1-201ENST00000013807 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
ERCC1-201ENST00000013807 PARP3Q9Y6F1 533 aa21.43■■□□□ 1.02
ERCC1-201ENST00000013807 ATP10DQ9P241 1426 aa21.43■■□□□ 1.02
ERCC1-201ENST00000013807 CYP19A1P11511 503 aaPredicted RBP21.42■■□□□ 1.02
ERCC1-201ENST00000013807 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
ERCC1-201ENST00000013807 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
ERCC1-201ENST00000013807 SLC39A6Q13433 755 aa21.41■■□□□ 1.02
ERCC1-201ENST00000013807 KCNA3P22001 575 aa21.4■■□□□ 1.02
ERCC1-201ENST00000013807 TM4SF1P30408 202 aa21.4■■□□□ 1.02
ERCC1-201ENST00000013807 FKBP8Q14318 412 aa21.4■■□□□ 1.02
ERCC1-201ENST00000013807 AFDNP55196 1824 aaKnown RBP21.4■■□□□ 1.02
ERCC1-201ENST00000013807 NRXN2Q9P2S2 1712 aa21.39■■□□□ 1.01
ERCC1-201ENST00000013807 A0A0G2JLW4 131 aa21.39■■□□□ 1.01
ERCC1-201ENST00000013807 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
ERCC1-201ENST00000013807 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
ERCC1-201ENST00000013807 GNAT3A8MTJ3 354 aa21.37■■□□□ 1.01
ERCC1-201ENST00000013807 DPEP1P16444 411 aa21.37■■□□□ 1.01
ERCC1-201ENST00000013807 DDR1Q08345 913 aa21.37■■□□□ 1.01
ERCC1-201ENST00000013807 IL17REQ8NFR9 667 aa21.37■■□□□ 1.01
ERCC1-201ENST00000013807 GPBP1L1Q9HC44 474 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-201ENST00000013807 NARFQ9UHQ1 456 aa21.36■■□□□ 1.01
ERCC1-201ENST00000013807 WWC3Q9ULE0 1092 aa21.36■■□□□ 1.01
ERCC1-201ENST00000013807 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
ERCC1-201ENST00000013807 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
ERCC1-201ENST00000013807 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
ERCC1-201ENST00000013807 ZPR1O75312 459 aa21.35■■□□□ 1.01
ERCC1-201ENST00000013807 CEP350Q5VT06 3117 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms