Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm25239-201ENSMUST00000174915 86 ntBASIC40.2■■■■■ 4.03
Smarcd2Q99JR8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Smarcd2Q99JR8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Smarcd2Q99JR8 Gm15042-201ENSMUST00000120212 883 ntBASIC34.98■■■■□ 3.19
Smarcd2Q99JR8 Gm24109-201ENSMUST00000175489 103 ntBASIC34.88■■■■□ 3.17
Smarcd2Q99JR8 Gm15045-201ENSMUST00000117359 883 ntBASIC34.15■■■■□ 3.06
Smarcd2Q99JR8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Smarcd2Q99JR8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Smarcd2Q99JR8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Smarcd2Q99JR8 Gm23366-201ENSMUST00000175022 89 ntBASIC33.57■■■□□ 2.96
Smarcd2Q99JR8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Smarcd2Q99JR8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Smarcd2Q99JR8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Smarcd2Q99JR8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Smarcd2Q99JR8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.6■■■□□ 2.81
Smarcd2Q99JR8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Smarcd2Q99JR8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Smarcd2Q99JR8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.34■■■□□ 2.77
Smarcd2Q99JR8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.28■■■□□ 2.76
Smarcd2Q99JR8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Smarcd2Q99JR8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Smarcd2Q99JR8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Smarcd2Q99JR8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.92■■■□□ 2.7
Smarcd2Q99JR8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smarcd2Q99JR8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Smarcd2Q99JR8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Smarcd2Q99JR8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Smarcd2Q99JR8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.82■■■□□ 2.68
Smarcd2Q99JR8 Gm25238-201ENSMUST00000174914 89 ntBASIC31.77■■■□□ 2.68
Smarcd2Q99JR8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Smarcd2Q99JR8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smarcd2Q99JR8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Smarcd2Q99JR8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.32■■■□□ 2.6
Smarcd2Q99JR8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smarcd2Q99JR8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
Smarcd2Q99JR8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Smarcd2Q99JR8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Smarcd2Q99JR8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Smarcd2Q99JR8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.91■■■□□ 2.54
Smarcd2Q99JR8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Smarcd2Q99JR8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
Smarcd2Q99JR8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.8■■■□□ 2.52
Smarcd2Q99JR8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.68■■■□□ 2.5
Smarcd2Q99JR8 Psd-208ENSMUST00000224556 2034 ntBASIC30.66■■■□□ 2.5
Smarcd2Q99JR8 Gm27325-201ENSMUST00000175467 74 ntBASIC30.62■■■□□ 2.49
Smarcd2Q99JR8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.57■■■□□ 2.48
Smarcd2Q99JR8 Gm25262-201ENSMUST00000174934 133 ntBASIC30.55■■■□□ 2.48
Smarcd2Q99JR8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Smarcd2Q99JR8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smarcd2Q99JR8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Smarcd2Q99JR8 Rab21-202ENSMUST00000218831 843 ntBASIC30.19■■■□□ 2.42
Smarcd2Q99JR8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Smarcd2Q99JR8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.13■■■□□ 2.41
Smarcd2Q99JR8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.11■■■□□ 2.41
Smarcd2Q99JR8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.09■■■□□ 2.41
Smarcd2Q99JR8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Smarcd2Q99JR8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.06■■■□□ 2.4
Smarcd2Q99JR8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.97■■■□□ 2.39
Smarcd2Q99JR8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Smarcd2Q99JR8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Smarcd2Q99JR8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Smarcd2Q99JR8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.87■■■□□ 2.37
Smarcd2Q99JR8 Gm26115-201ENSMUST00000175605 87 ntBASIC29.85■■■□□ 2.37
Smarcd2Q99JR8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Smarcd2Q99JR8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Smarcd2Q99JR8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smarcd2Q99JR8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Smarcd2Q99JR8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.72■■■□□ 2.35
Smarcd2Q99JR8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Smarcd2Q99JR8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Smarcd2Q99JR8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.67■■■□□ 2.34
Smarcd2Q99JR8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.66■■■□□ 2.34
Smarcd2Q99JR8 Gm8109-201ENSMUST00000194076 746 ntBASIC29.64■■■□□ 2.34
Smarcd2Q99JR8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Smarcd2Q99JR8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.58■■■□□ 2.33
Smarcd2Q99JR8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smarcd2Q99JR8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smarcd2Q99JR8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Smarcd2Q99JR8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Smarcd2Q99JR8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.48■■■□□ 2.31
Smarcd2Q99JR8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Smarcd2Q99JR8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Smarcd2Q99JR8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smarcd2Q99JR8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smarcd2Q99JR8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smarcd2Q99JR8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Smarcd2Q99JR8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.28■■■□□ 2.28
Smarcd2Q99JR8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Smarcd2Q99JR8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Smarcd2Q99JR8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.18■■■□□ 2.26
Smarcd2Q99JR8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Smarcd2Q99JR8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Smarcd2Q99JR8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Smarcd2Q99JR8 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.1■■■□□ 2.25
Smarcd2Q99JR8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
Smarcd2Q99JR8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.09■■■□□ 2.25
Smarcd2Q99JR8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smarcd2Q99JR8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smarcd2Q99JR8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.04■■■□□ 2.24
Smarcd2Q99JR8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms