Protein–RNA interactions for Protein: Q8VEF1

Gramd1a, GRAM domain-containing protein 1A, mousemouse

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gramd1aQ8VEF1 Gm25239-201ENSMUST00000174915 86 ntBASIC39.82■■■■□ 3.97
Gramd1aQ8VEF1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
Gramd1aQ8VEF1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gramd1aQ8VEF1 Gm15042-201ENSMUST00000120212 883 ntBASIC34.69■■■■□ 3.14
Gramd1aQ8VEF1 Gm24109-201ENSMUST00000175489 103 ntBASIC34.54■■■■□ 3.12
Gramd1aQ8VEF1 Gm15045-201ENSMUST00000117359 883 ntBASIC33.88■■■■□ 3.01
Gramd1aQ8VEF1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Gramd1aQ8VEF1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Gramd1aQ8VEF1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Gramd1aQ8VEF1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Gramd1aQ8VEF1 Gm23366-201ENSMUST00000175022 89 ntBASIC33.29■■■□□ 2.92
Gramd1aQ8VEF1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Gramd1aQ8VEF1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Gramd1aQ8VEF1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gramd1aQ8VEF1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Gramd1aQ8VEF1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.26■■■□□ 2.75
Gramd1aQ8VEF1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Gramd1aQ8VEF1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32■■■□□ 2.71
Gramd1aQ8VEF1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
Gramd1aQ8VEF1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Gramd1aQ8VEF1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gramd1aQ8VEF1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Gramd1aQ8VEF1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.72■■■□□ 2.67
Gramd1aQ8VEF1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Gramd1aQ8VEF1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Gramd1aQ8VEF1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Gramd1aQ8VEF1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Gramd1aQ8VEF1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.52■■■□□ 2.64
Gramd1aQ8VEF1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Gramd1aQ8VEF1 Gm25238-201ENSMUST00000174914 89 ntBASIC31.45■■■□□ 2.63
Gramd1aQ8VEF1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Gramd1aQ8VEF1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Gramd1aQ8VEF1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.13■■■□□ 2.57
Gramd1aQ8VEF1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Gramd1aQ8VEF1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
Gramd1aQ8VEF1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Gramd1aQ8VEF1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Gramd1aQ8VEF1 Psd-208ENSMUST00000224556 2034 ntBASIC30.78■■■□□ 2.52
Gramd1aQ8VEF1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Gramd1aQ8VEF1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Gramd1aQ8VEF1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.65■■■□□ 2.5
Gramd1aQ8VEF1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Gramd1aQ8VEF1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Gramd1aQ8VEF1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.54■■■□□ 2.48
Gramd1aQ8VEF1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.5■■■□□ 2.47
Gramd1aQ8VEF1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.38■■■□□ 2.45
Gramd1aQ8VEF1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.3■■■□□ 2.44
Gramd1aQ8VEF1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gramd1aQ8VEF1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.25■■■□□ 2.43
Gramd1aQ8VEF1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Gramd1aQ8VEF1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Gramd1aQ8VEF1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Gramd1aQ8VEF1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.97■■■□□ 2.39
Gramd1aQ8VEF1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Gramd1aQ8VEF1 Rab21-202ENSMUST00000218831 843 ntBASIC29.93■■■□□ 2.38
Gramd1aQ8VEF1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gramd1aQ8VEF1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.86■■■□□ 2.37
Gramd1aQ8VEF1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.85■■■□□ 2.37
Gramd1aQ8VEF1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.82■■■□□ 2.36
Gramd1aQ8VEF1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Gramd1aQ8VEF1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Gramd1aQ8VEF1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.68■■■□□ 2.34
Gramd1aQ8VEF1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.66■■■□□ 2.34
Gramd1aQ8VEF1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Gramd1aQ8VEF1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Gramd1aQ8VEF1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Gramd1aQ8VEF1 Gm26115-201ENSMUST00000175605 87 ntBASIC29.55■■■□□ 2.32
Gramd1aQ8VEF1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Gramd1aQ8VEF1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Gramd1aQ8VEF1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.31
Gramd1aQ8VEF1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.45■■■□□ 2.31
Gramd1aQ8VEF1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.45■■■□□ 2.3
Gramd1aQ8VEF1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Gramd1aQ8VEF1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Gramd1aQ8VEF1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Gramd1aQ8VEF1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Gramd1aQ8VEF1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Gramd1aQ8VEF1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Gramd1aQ8VEF1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.33■■■□□ 2.29
Gramd1aQ8VEF1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Gramd1aQ8VEF1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Gramd1aQ8VEF1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.25■■■□□ 2.27
Gramd1aQ8VEF1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Gramd1aQ8VEF1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.22■■■□□ 2.27
Gramd1aQ8VEF1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gramd1aQ8VEF1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gramd1aQ8VEF1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gramd1aQ8VEF1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Gramd1aQ8VEF1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.05■■■□□ 2.24
Gramd1aQ8VEF1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Gramd1aQ8VEF1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gramd1aQ8VEF1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Gramd1aQ8VEF1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gramd1aQ8VEF1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Gramd1aQ8VEF1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.96■■■□□ 2.23
Gramd1aQ8VEF1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Gramd1aQ8VEF1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gramd1aQ8VEF1 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.9■■■□□ 2.22
Gramd1aQ8VEF1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Gramd1aQ8VEF1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms