Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC125388.1-201ENST00000459631 156 ntBASIC-2.19□□□□□ -2.76
HSPG2P98160 SNORD73B-201ENST00000364394 72 ntBASIC-2.21□□□□□ -2.76
HSPG2P98160 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
HSPG2P98160 AL606753.1-201ENST00000427435 87 ntBASIC-2.21□□□□□ -2.76
HSPG2P98160 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.22□□□□□ -2.76
HSPG2P98160 MIR1302-4-201ENST00000408701 150 ntBASIC-2.22□□□□□ -2.77
HSPG2P98160 RNU6-724P-201ENST00000390958 105 ntBASIC-2.25□□□□□ -2.77
HSPG2P98160 MIR548T-201ENST00000408369 74 ntBASIC-2.3□□□□□ -2.78
HSPG2P98160 MTND4LP19-201ENST00000403051 166 ntBASIC-2.34□□□□□ -2.78
HSPG2P98160 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.38□□□□□ -2.79
HSPG2P98160 RNA5SP170-201ENST00000517150 101 ntBASIC-2.4□□□□□ -2.79
HSPG2P98160 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-2.43□□□□□ -2.8
HSPG2P98160 MIR3668-201ENST00000582138 75 ntBASIC-2.43□□□□□ -2.8
HSPG2P98160 MIR4719-201ENST00000585233 84 ntBASIC-2.43□□□□□ -2.8
HSPG2P98160 AP001094.1-201ENST00000579805 193 ntBASIC-2.45□□□□□ -2.8
HSPG2P98160 MT-TR-201ENST00000387439 65 ntBASIC-2.48□□□□□ -2.81
HSPG2P98160 RNU4-37P-201ENST00000410214 84 ntBASIC-2.56□□□□□ -2.82
HSPG2P98160 RNU6-638P-201ENST00000516582 104 ntBASIC-2.57□□□□□ -2.82
HSPG2P98160 AC099654.10-201ENST00000640395 161 ntBASIC-2.61□□□□□ -2.83
HSPG2P98160 AL603908.1-201ENST00000406098 201 ntBASIC-2.63□□□□□ -2.83
HSPG2P98160 snosnR66.1-201ENST00000391095 99 ntBASIC-2.63□□□□□ -2.83
HSPG2P98160 U2.22-201ENST00000636441 106 ntBASIC-2.68□□□□□ -2.84
HSPG2P98160 SNORA72.7-201ENST00000516349 94 ntBASIC-2.72□□□□□ -2.85
HSPG2P98160 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.87□□□□□ -2.87
Retrieved 24 of 98,524 protein–RNA pairs in 199.5 ms