Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 MIR4426-201ENST00000640330 63 ntBASIC-1.87□□□□□ -2.71
FOXA2Q9Y261 MIR379-201ENST00000362218 67 ntBASIC-1.88□□□□□ -2.71
FOXA2Q9Y261 RNU6-590P-201ENST00000365039 107 ntBASIC-1.89□□□□□ -2.71
FOXA2Q9Y261 RNU6-419P-201ENST00000517030 63 ntBASIC-1.89□□□□□ -2.71
FOXA2Q9Y261 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.9□□□□□ -2.71
FOXA2Q9Y261 RNY4P25-201ENST00000459254 96 ntBASIC-1.9□□□□□ -2.71
FOXA2Q9Y261 RNU6-300P-201ENST00000459080 104 ntBASIC-1.92□□□□□ -2.72
FOXA2Q9Y261 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 RNU6-854P-201ENST00000364036 107 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 RNU6-176P-201ENST00000517196 105 ntBASIC-1.94□□□□□ -2.72
FOXA2Q9Y261 RNU6-471P-201ENST00000383944 106 ntBASIC-1.95□□□□□ -2.72
FOXA2Q9Y261 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.95□□□□□ -2.72
FOXA2Q9Y261 RNU6-803P-201ENST00000516034 102 ntBASIC-1.95□□□□□ -2.72
FOXA2Q9Y261 RNU6-345P-201ENST00000517001 107 ntBASIC-1.96□□□□□ -2.72
FOXA2Q9Y261 AL359920.1-201ENST00000618332 176 ntBASIC-1.97□□□□□ -2.72
FOXA2Q9Y261 SNORD114-13-201ENST00000364377 74 ntBASIC-1.98□□□□□ -2.73
FOXA2Q9Y261 RNY4P7-201ENST00000364600 96 ntBASIC-1.99□□□□□ -2.73
FOXA2Q9Y261 SNORD115-45-201ENST00000391078 81 ntBASIC-1.99□□□□□ -2.73
FOXA2Q9Y261 AC114801.3-201ENST00000510231 177 ntBASIC-1.99□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.99□□□□□ -2.73
FOXA2Q9Y261 RNU6-737P-201ENST00000365370 107 ntBASIC-2□□□□□ -2.73
FOXA2Q9Y261 RNU6-1044P-201ENST00000384755 107 ntBASIC-2□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.830-201ENST00000628531 96 ntBASIC-2□□□□□ -2.73
FOXA2Q9Y261 RNY4-201ENST00000516507 96 ntBASIC-2.01□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.02□□□□□ -2.73
FOXA2Q9Y261 MIR124-1-201ENST00000385275 85 ntBASIC-2.02□□□□□ -2.73
FOXA2Q9Y261 MIR548X-201ENST00000580069 75 ntBASIC-2.02□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.03□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.03□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.03□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.03□□□□□ -2.73
FOXA2Q9Y261 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.05□□□□□ -2.74
FOXA2Q9Y261 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.05□□□□□ -2.74
FOXA2Q9Y261 MIR548AH-201ENST00000637109 76 ntBASIC-2.05□□□□□ -2.74
FOXA2Q9Y261 RNU6-446P-201ENST00000362827 106 ntBASIC-2.07□□□□□ -2.74
FOXA2Q9Y261 RNA5SP224-201ENST00000365069 126 ntBASIC-2.07□□□□□ -2.74
FOXA2Q9Y261 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.07□□□□□ -2.74
FOXA2Q9Y261 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.07□□□□□ -2.74
FOXA2Q9Y261 RNA5SP106-201ENST00000517274 100 ntBASIC-2.07□□□□□ -2.74
FOXA2Q9Y261 MIR509-1-201ENST00000385265 94 ntBASIC-2.08□□□□□ -2.74
FOXA2Q9Y261 MIR509-2-201ENST00000390724 91 ntBASIC-2.08□□□□□ -2.74
FOXA2Q9Y261 AC139453.2-201ENST00000487255 133 ntBASIC-2.08□□□□□ -2.74
FOXA2Q9Y261 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.08□□□□□ -2.74
FOXA2Q9Y261 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.09□□□□□ -2.74
FOXA2Q9Y261 RNU6-788P-201ENST00000390967 104 ntBASIC-2.11□□□□□ -2.75
FOXA2Q9Y261 MIR548H4-201ENST00000408689 111 ntBASIC-2.11□□□□□ -2.75
FOXA2Q9Y261 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.11□□□□□ -2.75
FOXA2Q9Y261 MIR656-201ENST00000385224 78 ntBASIC-2.12□□□□□ -2.75
FOXA2Q9Y261 RNY4P10-201ENST00000365571 96 ntBASIC-2.13□□□□□ -2.75
FOXA2Q9Y261 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.13□□□□□ -2.75
FOXA2Q9Y261 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.14□□□□□ -2.75
FOXA2Q9Y261 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.14□□□□□ -2.75
FOXA2Q9Y261 SNORD45C-201ENST00000383893 79 ntBASIC-2.14□□□□□ -2.75
FOXA2Q9Y261 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.16□□□□□ -2.76
FOXA2Q9Y261 RNU6-987P-201ENST00000384759 104 ntBASIC-2.17□□□□□ -2.76
FOXA2Q9Y261 RNU6-822P-201ENST00000362707 106 ntBASIC-2.18□□□□□ -2.76
FOXA2Q9Y261 MIR545-201ENST00000385085 106 ntBASIC-2.18□□□□□ -2.76
FOXA2Q9Y261 SNORD113-4-201ENST00000364802 75 ntBASIC-2.19□□□□□ -2.76
FOXA2Q9Y261 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.19□□□□□ -2.76
FOXA2Q9Y261 RNU6-836P-201ENST00000362920 107 ntBASIC-2.21□□□□□ -2.76
FOXA2Q9Y261 RNU6-829P-201ENST00000363700 112 ntBASIC-2.21□□□□□ -2.76
FOXA2Q9Y261 MIR633-201ENST00000384821 98 ntBASIC-2.21□□□□□ -2.76
FOXA2Q9Y261 RNU4-33P-201ENST00000364316 85 ntBASIC-2.22□□□□□ -2.76
FOXA2Q9Y261 MIR4317-201ENST00000637586 65 ntBASIC-2.22□□□□□ -2.76
FOXA2Q9Y261 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.23□□□□□ -2.77
FOXA2Q9Y261 SNORD115.2-201ENST00000391126 59 ntBASIC-2.23□□□□□ -2.77
FOXA2Q9Y261 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.24□□□□□ -2.77
FOXA2Q9Y261 RNU6-665P-201ENST00000384639 107 ntBASIC-2.24□□□□□ -2.77
FOXA2Q9Y261 AC125388.1-201ENST00000459631 156 ntBASIC-2.25□□□□□ -2.77
FOXA2Q9Y261 SNORA72.7-201ENST00000516349 94 ntBASIC-2.26□□□□□ -2.77
FOXA2Q9Y261 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.28□□□□□ -2.77
FOXA2Q9Y261 MIR548AL-201ENST00000578416 97 ntBASIC-2.28□□□□□ -2.77
FOXA2Q9Y261 RNU6-638P-201ENST00000516582 104 ntBASIC-2.29□□□□□ -2.78
FOXA2Q9Y261 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.31□□□□□ -2.78
FOXA2Q9Y261 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.31□□□□□ -2.78
FOXA2Q9Y261 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.32□□□□□ -2.78
FOXA2Q9Y261 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.33□□□□□ -2.78
FOXA2Q9Y261 AC079150.2-201ENST00000443733 78 ntBASIC-2.33□□□□□ -2.78
FOXA2Q9Y261 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.37□□□□□ -2.79
FOXA2Q9Y261 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.38□□□□□ -2.79
FOXA2Q9Y261 RNU6-422P-201ENST00000384632 107 ntBASIC-2.39□□□□□ -2.79
FOXA2Q9Y261 RNU6-808P-201ENST00000391233 108 ntBASIC-2.4□□□□□ -2.79
FOXA2Q9Y261 RNU6-499P-201ENST00000365615 107 ntBASIC-2.41□□□□□ -2.8
FOXA2Q9Y261 RNA5SP449-201ENST00000516871 130 ntBASIC-2.41□□□□□ -2.8
FOXA2Q9Y261 RNU6-986P-201ENST00000363133 102 ntBASIC-2.43□□□□□ -2.8
FOXA2Q9Y261 RNU6-838P-201ENST00000363399 108 ntBASIC-2.43□□□□□ -2.8
FOXA2Q9Y261 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.43□□□□□ -2.8
FOXA2Q9Y261 RNU6-59P-201ENST00000384787 107 ntBASIC-2.44□□□□□ -2.8
FOXA2Q9Y261 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.47□□□□□ -2.8
FOXA2Q9Y261 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.48□□□□□ -2.81
FOXA2Q9Y261 RNU6-753P-201ENST00000363926 107 ntBASIC-2.52□□□□□ -2.81
FOXA2Q9Y261 RNU6-936P-201ENST00000384005 107 ntBASIC-2.53□□□□□ -2.81
FOXA2Q9Y261 RNU4-85P-201ENST00000364675 123 ntBASIC-2.55□□□□□ -2.82
FOXA2Q9Y261 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.55□□□□□ -2.82
FOXA2Q9Y261 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.55□□□□□ -2.82
FOXA2Q9Y261 RNY4P13-201ENST00000384284 96 ntBASIC-2.55□□□□□ -2.82
FOXA2Q9Y261 RNU6-930P-201ENST00000390938 100 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms