Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.45□□□□□ -2.64
CCDC88CQ9P219 RNY4-201ENST00000516507 96 ntBASIC-1.45□□□□□ -2.64
CCDC88CQ9P219 RNU6-446P-201ENST00000362827 106 ntBASIC-1.46□□□□□ -2.64
CCDC88CQ9P219 RNA5SP224-201ENST00000365069 126 ntBASIC-1.46□□□□□ -2.64
CCDC88CQ9P219 MT-TM-201ENST00000387377 68 ntBASIC-1.46□□□□□ -2.64
CCDC88CQ9P219 RNU6-800P-201ENST00000384473 103 ntBASIC-1.47□□□□□ -2.64
CCDC88CQ9P219 RNA5SP170-201ENST00000517150 101 ntBASIC-1.47□□□□□ -2.64
CCDC88CQ9P219 U6.111-201ENST00000636093 83 ntBASIC-1.47□□□□□ -2.64
CCDC88CQ9P219 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.47□□□□□ -2.65
CCDC88CQ9P219 MIR1254-1-201ENST00000408257 97 ntBASIC-1.47□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.49□□□□□ -2.65
CCDC88CQ9P219 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.49□□□□□ -2.65
CCDC88CQ9P219 SNORD113-4-201ENST00000364802 75 ntBASIC-1.5□□□□□ -2.65
CCDC88CQ9P219 MIR1302-4-201ENST00000408701 150 ntBASIC-1.5□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.5□□□□□ -2.65
CCDC88CQ9P219 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.5□□□□□ -2.65
CCDC88CQ9P219 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.5□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.51□□□□□ -2.65
CCDC88CQ9P219 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.51□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.52□□□□□ -2.65
CCDC88CQ9P219 RNU6-808P-201ENST00000391233 108 ntBASIC-1.52□□□□□ -2.65
CCDC88CQ9P219 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.52□□□□□ -2.65
CCDC88CQ9P219 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.53□□□□□ -2.65
CCDC88CQ9P219 RNU6-822P-201ENST00000362707 106 ntBASIC-1.53□□□□□ -2.65
CCDC88CQ9P219 RNU6-829P-201ENST00000363700 112 ntBASIC-1.54□□□□□ -2.66
CCDC88CQ9P219 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.55□□□□□ -2.66
CCDC88CQ9P219 RNY4P25-201ENST00000459254 96 ntBASIC-1.56□□□□□ -2.66
CCDC88CQ9P219 AL731768.1-201ENST00000603124 139 ntBASIC-1.56□□□□□ -2.66
CCDC88CQ9P219 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.57□□□□□ -2.66
CCDC88CQ9P219 SNORD45C-201ENST00000383893 79 ntBASIC-1.58□□□□□ -2.66
CCDC88CQ9P219 AC114801.3-201ENST00000510231 177 ntBASIC-1.58□□□□□ -2.66
CCDC88CQ9P219 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.58□□□□□ -2.66
CCDC88CQ9P219 MIR633-201ENST00000384821 98 ntBASIC-1.59□□□□□ -2.66
CCDC88CQ9P219 MIR5693-201ENST00000577722 73 ntBASIC-1.59□□□□□ -2.66
CCDC88CQ9P219 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.61□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.63□□□□□ -2.67
CCDC88CQ9P219 MIR124-1-201ENST00000385275 85 ntBASIC-1.64□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.64□□□□□ -2.67
CCDC88CQ9P219 RNU6-499P-201ENST00000365615 107 ntBASIC-1.64□□□□□ -2.67
CCDC88CQ9P219 SNORD115.2-201ENST00000391126 59 ntBASIC-1.64□□□□□ -2.67
CCDC88CQ9P219 MIR545-201ENST00000385085 106 ntBASIC-1.65□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.66□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.66□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.66□□□□□ -2.67
CCDC88CQ9P219 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.66□□□□□ -2.67
CCDC88CQ9P219 MIR656-201ENST00000385224 78 ntBASIC-1.66□□□□□ -2.67
CCDC88CQ9P219 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.67□□□□□ -2.68
CCDC88CQ9P219 AC139453.2-201ENST00000487255 133 ntBASIC-1.67□□□□□ -2.68
CCDC88CQ9P219 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.68□□□□□ -2.68
CCDC88CQ9P219 RNU6-788P-201ENST00000390967 104 ntBASIC-1.68□□□□□ -2.68
CCDC88CQ9P219 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.68□□□□□ -2.68
CCDC88CQ9P219 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.68□□□□□ -2.68
CCDC88CQ9P219 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.69□□□□□ -2.68
CCDC88CQ9P219 RNU6-803P-201ENST00000516034 102 ntBASIC-1.69□□□□□ -2.68
CCDC88CQ9P219 RNU6-836P-201ENST00000362920 107 ntBASIC-1.69□□□□□ -2.68
CCDC88CQ9P219 AC125388.1-201ENST00000459631 156 ntBASIC-1.69□□□□□ -2.68
CCDC88CQ9P219 RNU6-854P-201ENST00000364036 107 ntBASIC-1.7□□□□□ -2.68
CCDC88CQ9P219 RNU6-737P-201ENST00000365370 107 ntBASIC-1.7□□□□□ -2.68
CCDC88CQ9P219 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
CCDC88CQ9P219 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.71□□□□□ -2.68
CCDC88CQ9P219 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.72□□□□□ -2.68
CCDC88CQ9P219 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
CCDC88CQ9P219 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.73□□□□□ -2.69
CCDC88CQ9P219 RNU6-986P-201ENST00000363133 102 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 RNU6-614P-201ENST00000384369 107 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 RNU6-987P-201ENST00000384759 104 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 RNU6-59P-201ENST00000384787 107 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 U6.59-201ENST00000615686 107 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 RNU6-838P-201ENST00000363399 108 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 RNU6-753P-201ENST00000363926 107 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.74□□□□□ -2.69
CCDC88CQ9P219 SNORD115-45-201ENST00000391078 81 ntBASIC-1.76□□□□□ -2.69
CCDC88CQ9P219 SNORD114-13-201ENST00000364377 74 ntBASIC-1.78□□□□□ -2.69
CCDC88CQ9P219 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.79□□□□□ -2.7
CCDC88CQ9P219 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.79□□□□□ -2.7
CCDC88CQ9P219 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.8□□□□□ -2.7
CCDC88CQ9P219 RNU6-936P-201ENST00000384005 107 ntBASIC-1.81□□□□□ -2.7
CCDC88CQ9P219 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.83□□□□□ -2.7
CCDC88CQ9P219 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.84□□□□□ -2.7
CCDC88CQ9P219 AL359920.1-201ENST00000618332 176 ntBASIC-1.84□□□□□ -2.7
CCDC88CQ9P219 RNU6-422P-201ENST00000384632 107 ntBASIC-1.85□□□□□ -2.71
CCDC88CQ9P219 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.85□□□□□ -2.71
CCDC88CQ9P219 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.85□□□□□ -2.71
CCDC88CQ9P219 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.86□□□□□ -2.71
CCDC88CQ9P219 AC079150.2-201ENST00000443733 78 ntBASIC-1.86□□□□□ -2.71
CCDC88CQ9P219 MIR548AH-201ENST00000637109 76 ntBASIC-1.86□□□□□ -2.71
CCDC88CQ9P219 MIR548F3-201ENST00000408509 87 ntBASIC-1.88□□□□□ -2.71
CCDC88CQ9P219 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.89□□□□□ -2.71
CCDC88CQ9P219 SNORA72.7-201ENST00000516349 94 ntBASIC-1.9□□□□□ -2.71
CCDC88CQ9P219 RNU6-930P-201ENST00000390938 100 ntBASIC-1.91□□□□□ -2.71
CCDC88CQ9P219 RNY4P10-201ENST00000365571 96 ntBASIC-1.92□□□□□ -2.72
CCDC88CQ9P219 MTND4LP19-201ENST00000403051 166 ntBASIC-1.93□□□□□ -2.72
CCDC88CQ9P219 U6.103-201ENST00000637085 61 ntBASIC-1.94□□□□□ -2.72
CCDC88CQ9P219 MIR509-1-201ENST00000385265 94 ntBASIC-1.98□□□□□ -2.73
CCDC88CQ9P219 MIR509-2-201ENST00000390724 91 ntBASIC-1.98□□□□□ -2.73
CCDC88CQ9P219 RNA5SP106-201ENST00000517274 100 ntBASIC-2□□□□□ -2.73
CCDC88CQ9P219 RNU6-485P-201ENST00000363475 107 ntBASIC-2.02□□□□□ -2.73
CCDC88CQ9P219 RNU6-638P-201ENST00000516582 104 ntBASIC-2.03□□□□□ -2.73
CCDC88CQ9P219 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 342.8 ms