Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MIR4748-201ENST00000578076 82 ntBASIC-1.72□□□□□ -2.68
Q9N2K0 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.73□□□□□ -2.69
Q9N2K0 RNU4-33P-201ENST00000364316 85 ntBASIC-1.75□□□□□ -2.69
Q9N2K0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
Q9N2K0 MT-TM-201ENST00000387377 68 ntBASIC-1.78□□□□□ -2.69
Q9N2K0 SNORD115.2-201ENST00000391126 59 ntBASIC-1.78□□□□□ -2.69
Q9N2K0 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.78□□□□□ -2.69
Q9N2K0 MIR4317-201ENST00000637586 65 ntBASIC-1.78□□□□□ -2.69
Q9N2K0 RNY4P9-201ENST00000363194 97 ntBASIC-1.79□□□□□ -2.7
Q9N2K0 MIR548H4-201ENST00000408689 111 ntBASIC-1.79□□□□□ -2.7
Q9N2K0 AC139453.2-201ENST00000487255 133 ntBASIC-1.8□□□□□ -2.7
Q9N2K0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.8□□□□□ -2.7
Q9N2K0 RNU6-822P-201ENST00000362707 106 ntBASIC-1.81□□□□□ -2.7
Q9N2K0 AC125388.1-201ENST00000459631 156 ntBASIC-1.81□□□□□ -2.7
Q9N2K0 RNU6-345P-201ENST00000517001 107 ntBASIC-1.81□□□□□ -2.7
Q9N2K0 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.82□□□□□ -2.7
Q9N2K0 AC079150.2-201ENST00000443733 78 ntBASIC-1.83□□□□□ -2.7
Q9N2K0 MIR548AL-201ENST00000578416 97 ntBASIC-1.83□□□□□ -2.7
Q9N2K0 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.83□□□□□ -2.7
Q9N2K0 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.85□□□□□ -2.71
Q9N2K0 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.85□□□□□ -2.71
Q9N2K0 RNU6-638P-201ENST00000516582 104 ntBASIC-1.85□□□□□ -2.71
Q9N2K0 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.86□□□□□ -2.71
Q9N2K0 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.86□□□□□ -2.71
Q9N2K0 SNORD54-201ENST00000459159 67 ntBASIC-1.86□□□□□ -2.71
Q9N2K0 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.88□□□□□ -2.71
Q9N2K0 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.88□□□□□ -2.71
Q9N2K0 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.89□□□□□ -2.71
Q9N2K0 RNU6-986P-201ENST00000363133 102 ntBASIC-1.9□□□□□ -2.71
Q9N2K0 SNORA72.7-201ENST00000516349 94 ntBASIC-1.9□□□□□ -2.71
Q9N2K0 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.91□□□□□ -2.72
Q9N2K0 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.91□□□□□ -2.72
Q9N2K0 RNA5SP224-201ENST00000365069 126 ntBASIC-1.91□□□□□ -2.72
Q9N2K0 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.91□□□□□ -2.72
Q9N2K0 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.92□□□□□ -2.72
Q9N2K0 SNORD45C-201ENST00000383893 79 ntBASIC-1.92□□□□□ -2.72
Q9N2K0 RNU6-936P-201ENST00000384005 107 ntBASIC-1.92□□□□□ -2.72
Q9N2K0 RNA5SP93-201ENST00000362525 114 ntBASIC-1.93□□□□□ -2.72
Q9N2K0 RNU6-753P-201ENST00000363926 107 ntBASIC-1.93□□□□□ -2.72
Q9N2K0 RNU6-836P-201ENST00000362920 107 ntBASIC-1.94□□□□□ -2.72
Q9N2K0 RNU6-737P-201ENST00000365370 107 ntBASIC-1.94□□□□□ -2.72
Q9N2K0 RNU6-499P-201ENST00000365615 107 ntBASIC-1.94□□□□□ -2.72
Q9N2K0 RNU6-808P-201ENST00000391233 108 ntBASIC-1.94□□□□□ -2.72
Q9N2K0 RNU6-230P-201ENST00000362457 104 ntBASIC-1.96□□□□□ -2.72
Q9N2K0 AL731768.1-201ENST00000603124 139 ntBASIC-1.96□□□□□ -2.72
Q9N2K0 RNU6-838P-201ENST00000363399 108 ntBASIC-1.97□□□□□ -2.72
Q9N2K0 MIR656-201ENST00000385224 78 ntBASIC-1.97□□□□□ -2.72
Q9N2K0 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.98□□□□□ -2.73
Q9N2K0 RNU6-854P-201ENST00000364036 107 ntBASIC-1.99□□□□□ -2.73
Q9N2K0 Y_RNA.397-201ENST00000383950 98 ntBASIC-2□□□□□ -2.73
Q9N2K0 RNU6-1340P-201ENST00000384438 107 ntBASIC-2□□□□□ -2.73
Q9N2K0 MIR5693-201ENST00000577722 73 ntBASIC-2.01□□□□□ -2.73
Q9N2K0 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.02□□□□□ -2.73
Q9N2K0 RNY4P25-201ENST00000459254 96 ntBASIC-2.03□□□□□ -2.73
Q9N2K0 RNY4-201ENST00000516507 96 ntBASIC-2.03□□□□□ -2.73
Q9N2K0 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 RNU6-59P-201ENST00000384787 107 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 MIR545-201ENST00000385085 106 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 RNU6-930P-201ENST00000390938 100 ntBASIC-2.05□□□□□ -2.74
Q9N2K0 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.06□□□□□ -2.74
Q9N2K0 RNU6-788P-201ENST00000390967 104 ntBASIC-2.07□□□□□ -2.74
Q9N2K0 RNU6-614P-201ENST00000384369 107 ntBASIC-2.08□□□□□ -2.74
Q9N2K0 MIR548F3-201ENST00000408509 87 ntBASIC-2.08□□□□□ -2.74
Q9N2K0 U6.59-201ENST00000615686 107 ntBASIC-2.08□□□□□ -2.74
Q9N2K0 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.09□□□□□ -2.74
Q9N2K0 MIR124-1-201ENST00000385275 85 ntBASIC-2.11□□□□□ -2.75
Q9N2K0 SNORD115-45-201ENST00000391078 81 ntBASIC-2.12□□□□□ -2.75
Q9N2K0 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.14□□□□□ -2.75
Q9N2K0 AL359920.1-201ENST00000618332 176 ntBASIC-2.14□□□□□ -2.75
Q9N2K0 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.15□□□□□ -2.75
Q9N2K0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.15□□□□□ -2.75
Q9N2K0 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.16□□□□□ -2.76
Q9N2K0 MIR548AH-201ENST00000637109 76 ntBASIC-2.19□□□□□ -2.76
Q9N2K0 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.2□□□□□ -2.76
Q9N2K0 RNU6-422P-201ENST00000384632 107 ntBASIC-2.2□□□□□ -2.76
Q9N2K0 MTND4LP19-201ENST00000403051 166 ntBASIC-2.22□□□□□ -2.76
Q9N2K0 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.22□□□□□ -2.76
Q9N2K0 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.25□□□□□ -2.77
Q9N2K0 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.29□□□□□ -2.78
Q9N2K0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.29□□□□□ -2.78
Q9N2K0 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.29□□□□□ -2.78
Q9N2K0 SNORD114-13-201ENST00000364377 74 ntBASIC-2.3□□□□□ -2.78
Q9N2K0 SNORD111B-201ENST00000408587 80 ntBASIC-2.34□□□□□ -2.78
Q9N2K0 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.37□□□□□ -2.79
Q9N2K0 MIR509-1-201ENST00000385265 94 ntBASIC-2.4□□□□□ -2.79
Q9N2K0 MIR509-2-201ENST00000390724 91 ntBASIC-2.4□□□□□ -2.79
Q9N2K0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.41□□□□□ -2.8
Q9N2K0 RNU6-803P-201ENST00000516034 102 ntBASIC-2.43□□□□□ -2.8
Q9N2K0 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.45□□□□□ -2.8
Q9N2K0 U6.103-201ENST00000637085 61 ntBASIC-2.45□□□□□ -2.8
Q9N2K0 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.47□□□□□ -2.8
Q9N2K0 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.47□□□□□ -2.8
Q9N2K0 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.48□□□□□ -2.81
Q9N2K0 RNU6-485P-201ENST00000363475 107 ntBASIC-2.5□□□□□ -2.81
Q9N2K0 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.5□□□□□ -2.81
Q9N2K0 RNY4P10-201ENST00000365571 96 ntBASIC-2.51□□□□□ -2.81
Q9N2K0 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.53□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms