Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 U6.111-201ENST00000636093 83 ntBASIC-2.57□□□□□ -2.82
USP42Q9H9J4 MIR509-1-201ENST00000385265 94 ntBASIC-2.58□□□□□ -2.82
USP42Q9H9J4 MIR509-2-201ENST00000390724 91 ntBASIC-2.58□□□□□ -2.82
USP42Q9H9J4 AL606753.1-201ENST00000427435 87 ntBASIC-2.58□□□□□ -2.82
USP42Q9H9J4 RNA5SP224-201ENST00000365069 126 ntBASIC-2.59□□□□□ -2.82
USP42Q9H9J4 RNU6-820P-201ENST00000384273 107 ntBASIC-2.59□□□□□ -2.82
USP42Q9H9J4 AC062037.1-201ENST00000605302 128 ntBASIC-2.59□□□□□ -2.82
USP42Q9H9J4 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.62□□□□□ -2.83
USP42Q9H9J4 RNU6-987P-201ENST00000384759 104 ntBASIC-2.62□□□□□ -2.83
USP42Q9H9J4 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.62□□□□□ -2.83
USP42Q9H9J4 RNU6-539P-201ENST00000516665 103 ntBASIC-2.62□□□□□ -2.83
USP42Q9H9J4 SNORD115-45-201ENST00000391078 81 ntBASIC-2.63□□□□□ -2.83
USP42Q9H9J4 RNA5SP106-201ENST00000517274 100 ntBASIC-2.63□□□□□ -2.83
USP42Q9H9J4 MIR4679-1-201ENST00000637619 75 ntBASIC-2.64□□□□□ -2.83
USP42Q9H9J4 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.65□□□□□ -2.83
USP42Q9H9J4 SNORD45C-201ENST00000383893 79 ntBASIC-2.65□□□□□ -2.83
USP42Q9H9J4 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.65□□□□□ -2.83
USP42Q9H9J4 RNU6-153P-201ENST00000364422 104 ntBASIC-2.66□□□□□ -2.83
USP42Q9H9J4 RNU6-406P-201ENST00000516470 107 ntBASIC-2.66□□□□□ -2.83
USP42Q9H9J4 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.66□□□□□ -2.83
USP42Q9H9J4 MIR548X-201ENST00000580069 75 ntBASIC-2.66□□□□□ -2.83
USP42Q9H9J4 MIR124-1-201ENST00000385275 85 ntBASIC-2.67□□□□□ -2.84
USP42Q9H9J4 RNY4P10-201ENST00000365571 96 ntBASIC-2.68□□□□□ -2.84
USP42Q9H9J4 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.68□□□□□ -2.84
USP42Q9H9J4 AC110620.1-201ENST00000416042 228 ntBASIC-2.68□□□□□ -2.84
USP42Q9H9J4 RNU6-836P-201ENST00000362920 107 ntBASIC-2.69□□□□□ -2.84
USP42Q9H9J4 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.69□□□□□ -2.84
USP42Q9H9J4 MIR548AH-201ENST00000637109 76 ntBASIC-2.69□□□□□ -2.84
USP42Q9H9J4 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.7□□□□□ -2.84
USP42Q9H9J4 MIR4317-201ENST00000637586 65 ntBASIC-2.7□□□□□ -2.84
USP42Q9H9J4 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.71□□□□□ -2.84
USP42Q9H9J4 MIR548H4-201ENST00000408689 111 ntBASIC-2.71□□□□□ -2.84
USP42Q9H9J4 MIR5582-201ENST00000579697 68 ntBASIC-2.71□□□□□ -2.84
USP42Q9H9J4 MIR3202-2-201ENST00000635980 79 ntBASIC-2.71□□□□□ -2.84
USP42Q9H9J4 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.73□□□□□ -2.85
USP42Q9H9J4 RNU6-857P-201ENST00000515893 110 ntBASIC-2.73□□□□□ -2.85
USP42Q9H9J4 RNU6-788P-201ENST00000390967 104 ntBASIC-2.75□□□□□ -2.85
USP42Q9H9J4 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.76□□□□□ -2.85
USP42Q9H9J4 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.76□□□□□ -2.85
USP42Q9H9J4 SNORD115.2-201ENST00000391126 59 ntBASIC-2.76□□□□□ -2.85
USP42Q9H9J4 MIR1255A-201ENST00000408338 113 ntBASIC-2.76□□□□□ -2.85
USP42Q9H9J4 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.79□□□□□ -2.86
USP42Q9H9J4 RNU6-279P-201ENST00000391297 101 ntBASIC-2.79□□□□□ -2.86
USP42Q9H9J4 RNU6-573P-201ENST00000383938 106 ntBASIC-2.8□□□□□ -2.86
USP42Q9H9J4 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.82□□□□□ -2.86
USP42Q9H9J4 RNU6-446P-201ENST00000362827 106 ntBASIC-2.83□□□□□ -2.86
USP42Q9H9J4 RNU6-665P-201ENST00000384639 107 ntBASIC-2.83□□□□□ -2.86
USP42Q9H9J4 RNU6-776P-201ENST00000364403 104 ntBASIC-2.84□□□□□ -2.86
USP42Q9H9J4 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.84□□□□□ -2.86
USP42Q9H9J4 MIR545-201ENST00000385085 106 ntBASIC-2.84□□□□□ -2.86
USP42Q9H9J4 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.85□□□□□ -2.87
USP42Q9H9J4 MIR548AL-201ENST00000578416 97 ntBASIC-2.85□□□□□ -2.87
USP42Q9H9J4 SNORD73B-201ENST00000364394 72 ntBASIC-2.87□□□□□ -2.87
USP42Q9H9J4 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.87□□□□□ -2.87
USP42Q9H9J4 RNU6-471P-201ENST00000383944 106 ntBASIC-2.88□□□□□ -2.87
USP42Q9H9J4 AC114801.3-201ENST00000510231 177 ntBASIC-2.88□□□□□ -2.87
USP42Q9H9J4 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.89□□□□□ -2.87
USP42Q9H9J4 RNU4-33P-201ENST00000364316 85 ntBASIC-2.9□□□□□ -2.87
USP42Q9H9J4 RNU6-422P-201ENST00000384632 107 ntBASIC-2.92□□□□□ -2.88
USP42Q9H9J4 RNY4P29-201ENST00000410801 97 ntBASIC-2.92□□□□□ -2.88
USP42Q9H9J4 RNA5SP225-201ENST00000410874 135 ntBASIC-2.92□□□□□ -2.88
USP42Q9H9J4 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 SNORA26.2-201ENST00000390922 122 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 AL603908.1-201ENST00000406098 201 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 SNORD113-4-201ENST00000364802 75 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 RNU6-808P-201ENST00000391233 108 ntBASIC-2.93□□□□□ -2.88
USP42Q9H9J4 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.94□□□□□ -2.88
USP42Q9H9J4 SNORD78.1-201ENST00000390866 65 ntBASIC-2.94□□□□□ -2.88
USP42Q9H9J4 MIR4662A-201ENST00000637499 67 ntBASIC-2.94□□□□□ -2.88
USP42Q9H9J4 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.95□□□□□ -2.88
USP42Q9H9J4 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.95□□□□□ -2.88
USP42Q9H9J4 RNA5SP170-201ENST00000517150 101 ntBASIC-3.01□□□□□ -2.89
USP42Q9H9J4 RNU6-829P-201ENST00000363700 112 ntBASIC-3.03□□□□□ -2.89
USP42Q9H9J4 MIR633-201ENST00000384821 98 ntBASIC-3.03□□□□□ -2.89
USP42Q9H9J4 RNU6-59P-201ENST00000384787 107 ntBASIC-3.05□□□□□ -2.9
USP42Q9H9J4 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.06□□□□□ -2.9
USP42Q9H9J4 U2.22-201ENST00000636441 106 ntBASIC-3.07□□□□□ -2.9
USP42Q9H9J4 RNU6-838P-201ENST00000363399 108 ntBASIC-3.1□□□□□ -2.91
USP42Q9H9J4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.1□□□□□ -2.91
USP42Q9H9J4 RNU4-85P-201ENST00000364675 123 ntBASIC-3.11□□□□□ -2.91
USP42Q9H9J4 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.11□□□□□ -2.91
USP42Q9H9J4 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.13□□□□□ -2.91
USP42Q9H9J4 RNU6-986P-201ENST00000363133 102 ntBASIC-3.14□□□□□ -2.91
USP42Q9H9J4 RNA5SP449-201ENST00000516871 130 ntBASIC-3.17□□□□□ -2.92
USP42Q9H9J4 AC079150.2-201ENST00000443733 78 ntBASIC-3.2□□□□□ -2.92
USP42Q9H9J4 MIR1302-4-201ENST00000408701 150 ntBASIC-3.21□□□□□ -2.92
USP42Q9H9J4 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.22□□□□□ -2.93
USP42Q9H9J4 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.24□□□□□ -2.93
USP42Q9H9J4 RNU6-753P-201ENST00000363926 107 ntBASIC-3.26□□□□□ -2.93
USP42Q9H9J4 AC125388.1-201ENST00000459631 156 ntBASIC-3.26□□□□□ -2.93
USP42Q9H9J4 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.27□□□□□ -2.93
USP42Q9H9J4 RNY4P13-201ENST00000384284 96 ntBASIC-3.27□□□□□ -2.93
USP42Q9H9J4 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.29□□□□□ -2.94
USP42Q9H9J4 MIR548F3-201ENST00000408509 87 ntBASIC-3.31□□□□□ -2.94
USP42Q9H9J4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.33□□□□□ -2.94
USP42Q9H9J4 RNU6-936P-201ENST00000384005 107 ntBASIC-3.34□□□□□ -2.94
USP42Q9H9J4 RNU6-930P-201ENST00000390938 100 ntBASIC-3.34□□□□□ -2.94
USP42Q9H9J4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.35□□□□□ -2.95
USP42Q9H9J4 RNU6-499P-201ENST00000365615 107 ntBASIC-3.36□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 290 ms