Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.5□□□□□ -2.97
PTP4A1Q93096 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.52□□□□□ -2.97
PTP4A1Q93096 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.52□□□□□ -2.97
PTP4A1Q93096 AC139453.2-201ENST00000487255 133 ntBASIC-3.52□□□□□ -2.97
PTP4A1Q93096 MIR3938-201ENST00000582157 103 ntBASIC-3.52□□□□□ -2.97
PTP4A1Q93096 MIR656-201ENST00000385224 78 ntBASIC-3.53□□□□□ -2.97
PTP4A1Q93096 RNU6-803P-201ENST00000516034 102 ntBASIC-3.53□□□□□ -2.97
PTP4A1Q93096 RNU6-857P-201ENST00000515893 110 ntBASIC-3.54□□□□□ -2.98
PTP4A1Q93096 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.54□□□□□ -2.98
PTP4A1Q93096 RNA5SP224-201ENST00000365069 126 ntBASIC-3.55□□□□□ -2.98
PTP4A1Q93096 RNU6-279P-201ENST00000391297 101 ntBASIC-3.56□□□□□ -2.98
PTP4A1Q93096 RNU6-854P-201ENST00000364036 107 ntBASIC-3.57□□□□□ -2.98
PTP4A1Q93096 RNU6-737P-201ENST00000365370 107 ntBASIC-3.57□□□□□ -2.98
PTP4A1Q93096 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.58□□□□□ -2.98
PTP4A1Q93096 SNORD73B-201ENST00000364394 72 ntBASIC-3.61□□□□□ -2.99
PTP4A1Q93096 SNORA26.2-201ENST00000390922 122 ntBASIC-3.61□□□□□ -2.99
PTP4A1Q93096 MIR1255A-201ENST00000408338 113 ntBASIC-3.61□□□□□ -2.99
PTP4A1Q93096 RNY4-201ENST00000516507 96 ntBASIC-3.61□□□□□ -2.99
PTP4A1Q93096 RNA5SP170-201ENST00000517150 101 ntBASIC-3.61□□□□□ -2.99
PTP4A1Q93096 MIR548X-201ENST00000580069 75 ntBASIC-3.62□□□□□ -2.99
PTP4A1Q93096 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.63□□□□□ -2.99
PTP4A1Q93096 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.63□□□□□ -2.99
PTP4A1Q93096 RNU6-987P-201ENST00000384759 104 ntBASIC-3.63□□□□□ -2.99
PTP4A1Q93096 MIR509-1-201ENST00000385265 94 ntBASIC-3.64□□□□□ -2.99
PTP4A1Q93096 MIR509-2-201ENST00000390724 91 ntBASIC-3.64□□□□□ -2.99
PTP4A1Q93096 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.65□□□□□ -2.99
PTP4A1Q93096 SNORD45C-201ENST00000383893 79 ntBASIC-3.66□□□□□ -3
PTP4A1Q93096 MIR4317-201ENST00000637586 65 ntBASIC-3.66□□□□□ -3
PTP4A1Q93096 RNU6-573P-201ENST00000383938 106 ntBASIC-3.67□□□□□ -3
PTP4A1Q93096 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.67□□□□□ -3
PTP4A1Q93096 RNY4P29-201ENST00000410801 97 ntBASIC-3.68□□□□□ -3
PTP4A1Q93096 RNU6-836P-201ENST00000362920 107 ntBASIC-3.69□□□□□ -3
PTP4A1Q93096 MIR548H4-201ENST00000408689 111 ntBASIC-3.71□□□□□ -3
PTP4A1Q93096 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.72□□□□□ -3
PTP4A1Q93096 RNA5SP106-201ENST00000517274 100 ntBASIC-3.72□□□□□ -3
PTP4A1Q93096 MIR124-1-201ENST00000385275 85 ntBASIC-3.73□□□□□ -3.01
PTP4A1Q93096 SNORD115-45-201ENST00000391078 81 ntBASIC-3.73□□□□□ -3.01
PTP4A1Q93096 AC110620.1-201ENST00000416042 228 ntBASIC-3.74□□□□□ -3.01
PTP4A1Q93096 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.75□□□□□ -3.01
PTP4A1Q93096 MIR4662A-201ENST00000637499 67 ntBASIC-3.75□□□□□ -3.01
PTP4A1Q93096 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.76□□□□□ -3.01
PTP4A1Q93096 SNORD78.1-201ENST00000390866 65 ntBASIC-3.77□□□□□ -3.01
PTP4A1Q93096 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.78□□□□□ -3.01
PTP4A1Q93096 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.78□□□□□ -3.01
PTP4A1Q93096 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.79□□□□□ -3.02
PTP4A1Q93096 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.8□□□□□ -3.02
PTP4A1Q93096 RNY4P10-201ENST00000365571 96 ntBASIC-3.8□□□□□ -3.02
PTP4A1Q93096 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.81□□□□□ -3.02
PTP4A1Q93096 SNORD115.2-201ENST00000391126 59 ntBASIC-3.81□□□□□ -3.02
PTP4A1Q93096 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.82□□□□□ -3.02
PTP4A1Q93096 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.84□□□□□ -3.02
PTP4A1Q93096 MIR548AH-201ENST00000637109 76 ntBASIC-3.84□□□□□ -3.02
PTP4A1Q93096 RNU6-776P-201ENST00000364403 104 ntBASIC-3.86□□□□□ -3.03
PTP4A1Q93096 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.86□□□□□ -3.03
PTP4A1Q93096 RNU6-788P-201ENST00000390967 104 ntBASIC-3.86□□□□□ -3.03
PTP4A1Q93096 MIR548AL-201ENST00000578416 97 ntBASIC-3.86□□□□□ -3.03
PTP4A1Q93096 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.87□□□□□ -3.03
PTP4A1Q93096 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.89□□□□□ -3.03
PTP4A1Q93096 MIR1302-4-201ENST00000408701 150 ntBASIC-3.89□□□□□ -3.03
PTP4A1Q93096 RNU6-471P-201ENST00000383944 106 ntBASIC-3.9□□□□□ -3.03
PTP4A1Q93096 RNA5SP225-201ENST00000410874 135 ntBASIC-3.9□□□□□ -3.03
PTP4A1Q93096 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.9□□□□□ -3.03
PTP4A1Q93096 RNU6-446P-201ENST00000362827 106 ntBASIC-3.93□□□□□ -3.04
PTP4A1Q93096 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.94□□□□□ -3.04
PTP4A1Q93096 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.95□□□□□ -3.04
PTP4A1Q93096 MIR545-201ENST00000385085 106 ntBASIC-3.96□□□□□ -3.04
PTP4A1Q93096 RNU4-33P-201ENST00000364316 85 ntBASIC-3.97□□□□□ -3.04
PTP4A1Q93096 RNU6-665P-201ENST00000384639 107 ntBASIC-3.99□□□□□ -3.05
PTP4A1Q93096 RNU6-1204P-201ENST00000363948 107 ntBASIC-4□□□□□ -3.05
PTP4A1Q93096 RNU6-808P-201ENST00000391233 108 ntBASIC-4.01□□□□□ -3.05
PTP4A1Q93096 RNU6-422P-201ENST00000384632 107 ntBASIC-4.03□□□□□ -3.05
PTP4A1Q93096 AC114801.3-201ENST00000510231 177 ntBASIC-4.03□□□□□ -3.05
PTP4A1Q93096 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.04□□□□□ -3.06
PTP4A1Q93096 SNORD113-4-201ENST00000364802 75 ntBASIC-4.07□□□□□ -3.06
PTP4A1Q93096 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.07□□□□□ -3.06
PTP4A1Q93096 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.07□□□□□ -3.06
PTP4A1Q93096 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.09□□□□□ -3.06
PTP4A1Q93096 RNU6-838P-201ENST00000363399 108 ntBASIC-4.17□□□□□ -3.08
PTP4A1Q93096 RNU6-59P-201ENST00000384787 107 ntBASIC-4.17□□□□□ -3.08
PTP4A1Q93096 RNU6-829P-201ENST00000363700 112 ntBASIC-4.26□□□□□ -3.09
PTP4A1Q93096 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.28□□□□□ -3.09
PTP4A1Q93096 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.29□□□□□ -3.1
PTP4A1Q93096 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.31□□□□□ -3.1
PTP4A1Q93096 RNU4-85P-201ENST00000364675 123 ntBASIC-4.32□□□□□ -3.1
PTP4A1Q93096 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.32□□□□□ -3.1
PTP4A1Q93096 RNU6-986P-201ENST00000363133 102 ntBASIC-4.35□□□□□ -3.11
PTP4A1Q93096 MIR633-201ENST00000384821 98 ntBASIC-4.36□□□□□ -3.11
PTP4A1Q93096 AC125388.1-201ENST00000459631 156 ntBASIC-4.4□□□□□ -3.11
PTP4A1Q93096 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.45□□□□□ -3.12
PTP4A1Q93096 AC079150.2-201ENST00000443733 78 ntBASIC-4.48□□□□□ -3.13
PTP4A1Q93096 MIR548F3-201ENST00000408509 87 ntBASIC-4.5□□□□□ -3.13
PTP4A1Q93096 RNA5SP449-201ENST00000516871 130 ntBASIC-4.5□□□□□ -3.13
PTP4A1Q93096 RNU6-753P-201ENST00000363926 107 ntBASIC-4.53□□□□□ -3.13
PTP4A1Q93096 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.56□□□□□ -3.14
PTP4A1Q93096 RNU6-930P-201ENST00000390938 100 ntBASIC-4.57□□□□□ -3.14
PTP4A1Q93096 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.59□□□□□ -3.14
PTP4A1Q93096 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.65□□□□□ -3.15
PTP4A1Q93096 RNY4P13-201ENST00000384284 96 ntBASIC-4.66□□□□□ -3.16
PTP4A1Q93096 RNU6-627P-201ENST00000364032 102 ntBASIC-4.67□□□□□ -3.16
PTP4A1Q93096 RNU6-936P-201ENST00000384005 107 ntBASIC-4.7□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms