Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.16□□□□□ -3.08
HDDC3Q8N4P3 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.16□□□□□ -3.08
HDDC3Q8N4P3 SNORD78.1-201ENST00000390866 65 ntBASIC-4.16□□□□□ -3.08
HDDC3Q8N4P3 RNA5SP225-201ENST00000410874 135 ntBASIC-4.18□□□□□ -3.08
HDDC3Q8N4P3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.18□□□□□ -3.08
HDDC3Q8N4P3 MIR4662A-201ENST00000637499 67 ntBASIC-4.18□□□□□ -3.08
HDDC3Q8N4P3 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.22□□□□□ -3.08
HDDC3Q8N4P3 RNU6-776P-201ENST00000364403 104 ntBASIC-4.23□□□□□ -3.09
HDDC3Q8N4P3 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.23□□□□□ -3.09
HDDC3Q8N4P3 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.26□□□□□ -3.09
HDDC3Q8N4P3 Y_RNA.59-201ENST00000362828 102 ntBASIC-4.27□□□□□ -3.09
HDDC3Q8N4P3 RNU6-471P-201ENST00000383944 106 ntBASIC-4.27□□□□□ -3.09
HDDC3Q8N4P3 MIR4317-201ENST00000637586 65 ntBASIC-4.27□□□□□ -3.09
HDDC3Q8N4P3 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.28□□□□□ -3.09
HDDC3Q8N4P3 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.32□□□□□ -3.1
HDDC3Q8N4P3 RNU6-987P-201ENST00000384759 104 ntBASIC-4.32□□□□□ -3.1
HDDC3Q8N4P3 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.33□□□□□ -3.1
HDDC3Q8N4P3 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.33□□□□□ -3.1
HDDC3Q8N4P3 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.35□□□□□ -3.11
HDDC3Q8N4P3 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.37□□□□□ -3.11
HDDC3Q8N4P3 AC114801.3-201ENST00000510231 177 ntBASIC-4.37□□□□□ -3.11
HDDC3Q8N4P3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.38□□□□□ -3.11
HDDC3Q8N4P3 MIR1302-4-201ENST00000408701 150 ntBASIC-4.4□□□□□ -3.11
HDDC3Q8N4P3 AC139453.2-201ENST00000487255 133 ntBASIC-4.4□□□□□ -3.11
HDDC3Q8N4P3 RNU6-446P-201ENST00000362827 106 ntBASIC-4.42□□□□□ -3.12
HDDC3Q8N4P3 AL731768.1-201ENST00000603124 139 ntBASIC-4.42□□□□□ -3.12
HDDC3Q8N4P3 RNA5SP106-201ENST00000517274 100 ntBASIC-4.44□□□□□ -3.12
HDDC3Q8N4P3 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.46□□□□□ -3.12
HDDC3Q8N4P3 RNY4P25-201ENST00000459254 96 ntBASIC-4.48□□□□□ -3.13
HDDC3Q8N4P3 RNU4-33P-201ENST00000364316 85 ntBASIC-4.51□□□□□ -3.13
HDDC3Q8N4P3 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.51□□□□□ -3.13
HDDC3Q8N4P3 MIR509-1-201ENST00000385265 94 ntBASIC-4.51□□□□□ -3.13
HDDC3Q8N4P3 MIR509-2-201ENST00000390724 91 ntBASIC-4.51□□□□□ -3.13
HDDC3Q8N4P3 SNORD115.2-201ENST00000391126 59 ntBASIC-4.52□□□□□ -3.13
HDDC3Q8N4P3 MIR548AL-201ENST00000578416 97 ntBASIC-4.54□□□□□ -3.14
HDDC3Q8N4P3 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.55□□□□□ -3.14
HDDC3Q8N4P3 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.58□□□□□ -3.14
HDDC3Q8N4P3 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.58□□□□□ -3.14
HDDC3Q8N4P3 MIR5693-201ENST00000577722 73 ntBASIC-4.58□□□□□ -3.14
HDDC3Q8N4P3 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.61□□□□□ -3.15
HDDC3Q8N4P3 SNORD113-4-201ENST00000364802 75 ntBASIC-4.61□□□□□ -3.15
HDDC3Q8N4P3 RNY4P10-201ENST00000365571 96 ntBASIC-4.61□□□□□ -3.15
HDDC3Q8N4P3 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.61□□□□□ -3.15
HDDC3Q8N4P3 MIR656-201ENST00000385224 78 ntBASIC-4.62□□□□□ -3.15
HDDC3Q8N4P3 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.63□□□□□ -3.15
HDDC3Q8N4P3 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.63□□□□□ -3.15
HDDC3Q8N4P3 RNA5SP224-201ENST00000365069 126 ntBASIC-4.64□□□□□ -3.15
HDDC3Q8N4P3 MIR633-201ENST00000384821 98 ntBASIC-4.64□□□□□ -3.15
HDDC3Q8N4P3 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.65□□□□□ -3.15
HDDC3Q8N4P3 RNU6-836P-201ENST00000362920 107 ntBASIC-4.66□□□□□ -3.16
HDDC3Q8N4P3 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.67□□□□□ -3.16
HDDC3Q8N4P3 RNU6-829P-201ENST00000363700 112 ntBASIC-4.68□□□□□ -3.16
HDDC3Q8N4P3 SNORD45C-201ENST00000383893 79 ntBASIC-4.68□□□□□ -3.16
HDDC3Q8N4P3 MIR548H4-201ENST00000408689 111 ntBASIC-4.68□□□□□ -3.16
HDDC3Q8N4P3 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.69□□□□□ -3.16
HDDC3Q8N4P3 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.7□□□□□ -3.16
HDDC3Q8N4P3 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.71□□□□□ -3.16
HDDC3Q8N4P3 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.74□□□□□ -3.17
HDDC3Q8N4P3 AL359920.1-201ENST00000618332 176 ntBASIC-4.74□□□□□ -3.17
HDDC3Q8N4P3 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.75□□□□□ -3.17
HDDC3Q8N4P3 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.76□□□□□ -3.17
HDDC3Q8N4P3 RNU6-737P-201ENST00000365370 107 ntBASIC-4.77□□□□□ -3.17
HDDC3Q8N4P3 AC125388.1-201ENST00000459631 156 ntBASIC-4.79□□□□□ -3.18
HDDC3Q8N4P3 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.8□□□□□ -3.18
HDDC3Q8N4P3 RNU6-808P-201ENST00000391233 108 ntBASIC-4.8□□□□□ -3.18
HDDC3Q8N4P3 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.82□□□□□ -3.18
HDDC3Q8N4P3 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.83□□□□□ -3.18
HDDC3Q8N4P3 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.87□□□□□ -3.19
HDDC3Q8N4P3 RNU6-838P-201ENST00000363399 108 ntBASIC-4.89□□□□□ -3.19
HDDC3Q8N4P3 AC079150.2-201ENST00000443733 78 ntBASIC-4.89□□□□□ -3.19
HDDC3Q8N4P3 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.89□□□□□ -3.19
HDDC3Q8N4P3 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.9□□□□□ -3.19
HDDC3Q8N4P3 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.9□□□□□ -3.19
HDDC3Q8N4P3 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.99□□□□□ -3.21
HDDC3Q8N4P3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.99□□□□□ -3.21
HDDC3Q8N4P3 SNORD114-13-201ENST00000364377 74 ntBASIC-5□□□□□ -3.21
HDDC3Q8N4P3 RNU6-854P-201ENST00000364036 107 ntBASIC-5.01□□□□□ -3.21
HDDC3Q8N4P3 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.02□□□□□ -3.21
HDDC3Q8N4P3 RNU6-753P-201ENST00000363926 107 ntBASIC-5.1□□□□□ -3.23
HDDC3Q8N4P3 RNU6-499P-201ENST00000365615 107 ntBASIC-5.1□□□□□ -3.23
HDDC3Q8N4P3 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.13□□□□□ -3.23
HDDC3Q8N4P3 RNU6-936P-201ENST00000384005 107 ntBASIC-5.15□□□□□ -3.23
HDDC3Q8N4P3 RNU6-59P-201ENST00000384787 107 ntBASIC-5.16□□□□□ -3.24
HDDC3Q8N4P3 RNU6-986P-201ENST00000363133 102 ntBASIC-5.2□□□□□ -3.24
HDDC3Q8N4P3 RNU6-422P-201ENST00000384632 107 ntBASIC-5.2□□□□□ -3.24
HDDC3Q8N4P3 SNORD115-45-201ENST00000391078 81 ntBASIC-5.22□□□□□ -3.25
HDDC3Q8N4P3 RNU6-638P-201ENST00000516582 104 ntBASIC-5.22□□□□□ -3.25
HDDC3Q8N4P3 RNU6-930P-201ENST00000390938 100 ntBASIC-5.23□□□□□ -3.25
HDDC3Q8N4P3 MIR124-1-201ENST00000385275 85 ntBASIC-5.25□□□□□ -3.25
HDDC3Q8N4P3 MIR545-201ENST00000385085 106 ntBASIC-5.26□□□□□ -3.25
HDDC3Q8N4P3 RNU6-788P-201ENST00000390967 104 ntBASIC-5.26□□□□□ -3.25
HDDC3Q8N4P3 SNORA72.7-201ENST00000516349 94 ntBASIC-5.31□□□□□ -3.26
HDDC3Q8N4P3 MIR548F3-201ENST00000408509 87 ntBASIC-5.38□□□□□ -3.27
HDDC3Q8N4P3 RNU6-614P-201ENST00000384369 107 ntBASIC-5.4□□□□□ -3.27
HDDC3Q8N4P3 U6.59-201ENST00000615686 107 ntBASIC-5.4□□□□□ -3.27
HDDC3Q8N4P3 MIR548AH-201ENST00000637109 76 ntBASIC-5.4□□□□□ -3.27
HDDC3Q8N4P3 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.51□□□□□ -3.29
HDDC3Q8N4P3 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.59□□□□□ -3.3
HDDC3Q8N4P3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-5.67□□□□□ -3.32
HDDC3Q8N4P3 RNU6-665P-201ENST00000384639 107 ntBASIC-5.73□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms