Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-1117P-201ENST00000384525 104 ntBASIC-4.41□□□□□ -3.12
USP54Q70EL1 MIR3133-201ENST00000583157 78 ntBASIC-4.41□□□□□ -3.12
USP54Q70EL1 RNU6-1131P-201ENST00000364955 107 ntBASIC-4.43□□□□□ -3.12
USP54Q70EL1 MIR363-201ENST00000384840 75 ntBASIC-4.44□□□□□ -3.12
USP54Q70EL1 RNU6-49P-201ENST00000384256 107 ntBASIC-4.45□□□□□ -3.12
USP54Q70EL1 RNU6-539P-201ENST00000516665 103 ntBASIC-4.45□□□□□ -3.12
USP54Q70EL1 MIR548AL-201ENST00000578416 97 ntBASIC-4.45□□□□□ -3.12
USP54Q70EL1 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.46□□□□□ -3.12
USP54Q70EL1 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.47□□□□□ -3.12
USP54Q70EL1 MIR548H4-201ENST00000408689 111 ntBASIC-4.47□□□□□ -3.12
USP54Q70EL1 RNA5SP449-201ENST00000516871 130 ntBASIC-4.47□□□□□ -3.12
USP54Q70EL1 RNU6-147P-201ENST00000383983 107 ntBASIC-4.49□□□□□ -3.13
USP54Q70EL1 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.49□□□□□ -3.13
USP54Q70EL1 RNY4P30-201ENST00000410216 95 ntBASIC-4.5□□□□□ -3.13
USP54Q70EL1 RNU4-33P-201ENST00000364316 85 ntBASIC-4.52□□□□□ -3.13
USP54Q70EL1 MIR494-201ENST00000349529 81 ntBASIC-4.53□□□□□ -3.13
USP54Q70EL1 AP001094.1-201ENST00000579805 193 ntBASIC-4.53□□□□□ -3.13
USP54Q70EL1 U6.111-201ENST00000636093 83 ntBASIC-4.54□□□□□ -3.14
USP54Q70EL1 RNU6-787P-201ENST00000384032 107 ntBASIC-4.55□□□□□ -3.14
USP54Q70EL1 RNU6-422P-201ENST00000384632 107 ntBASIC-4.56□□□□□ -3.14
USP54Q70EL1 Y_RNA.545-201ENST00000384652 105 ntBASIC-4.56□□□□□ -3.14
USP54Q70EL1 RNU6-820P-201ENST00000384273 107 ntBASIC-4.57□□□□□ -3.14
USP54Q70EL1 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.59□□□□□ -3.14
USP54Q70EL1 RNU6-209P-201ENST00000384118 107 ntBASIC-4.61□□□□□ -3.15
USP54Q70EL1 RNU6-788P-201ENST00000390967 104 ntBASIC-4.61□□□□□ -3.15
USP54Q70EL1 RNU6-313P-201ENST00000516317 112 ntBASIC-4.61□□□□□ -3.15
USP54Q70EL1 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.62□□□□□ -3.15
USP54Q70EL1 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.63□□□□□ -3.15
USP54Q70EL1 RNU6-794P-201ENST00000517261 64 ntBASIC-4.63□□□□□ -3.15
USP54Q70EL1 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.66□□□□□ -3.16
USP54Q70EL1 RNA5SP89-201ENST00000410300 108 ntBASIC-4.66□□□□□ -3.16
USP54Q70EL1 RNU4-85P-201ENST00000364675 123 ntBASIC-4.67□□□□□ -3.16
USP54Q70EL1 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.67□□□□□ -3.16
USP54Q70EL1 RNU6-294P-201ENST00000364999 102 ntBASIC-4.68□□□□□ -3.16
USP54Q70EL1 MIR545-201ENST00000385085 106 ntBASIC-4.68□□□□□ -3.16
USP54Q70EL1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-4.69□□□□□ -3.16
USP54Q70EL1 RNU6-471P-201ENST00000383944 106 ntBASIC-4.7□□□□□ -3.16
USP54Q70EL1 RNU6-808P-201ENST00000391233 108 ntBASIC-4.7□□□□□ -3.16
USP54Q70EL1 RNU6-919P-201ENST00000516731 104 ntBASIC-4.71□□□□□ -3.16
USP54Q70EL1 AC114801.3-201ENST00000510231 177 ntBASIC-4.73□□□□□ -3.17
USP54Q70EL1 RNU6-446P-201ENST00000362827 106 ntBASIC-4.73□□□□□ -3.17
USP54Q70EL1 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.73□□□□□ -3.17
USP54Q70EL1 SNORD20-201ENST00000384550 80 ntBASIC-4.77□□□□□ -3.17
USP54Q70EL1 AC090425.1-201ENST00000610007 140 ntBASIC-4.77□□□□□ -3.17
USP54Q70EL1 MIR548M-201ENST00000408260 86 ntBASIC-4.81□□□□□ -3.18
USP54Q70EL1 MIR1255A-201ENST00000408338 113 ntBASIC-4.83□□□□□ -3.18
USP54Q70EL1 RNU6-916P-201ENST00000516088 109 ntBASIC-4.83□□□□□ -3.18
USP54Q70EL1 MIR3202-2-201ENST00000635980 79 ntBASIC-4.86□□□□□ -3.19
USP54Q70EL1 SNORD113-4-201ENST00000364802 75 ntBASIC-4.87□□□□□ -3.19
USP54Q70EL1 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.87□□□□□ -3.19
USP54Q70EL1 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.87□□□□□ -3.19
USP54Q70EL1 RNU6-215P-201ENST00000365169 102 ntBASIC-4.88□□□□□ -3.19
USP54Q70EL1 RNU6-857P-201ENST00000515893 110 ntBASIC-4.88□□□□□ -3.19
USP54Q70EL1 RNU6-44P-201ENST00000384045 107 ntBASIC-4.89□□□□□ -3.19
USP54Q70EL1 Y_RNA.81-201ENST00000362997 102 ntBASIC-4.91□□□□□ -3.2
USP54Q70EL1 RNU6-406P-201ENST00000516470 107 ntBASIC-4.92□□□□□ -3.2
USP54Q70EL1 RNU6-838P-201ENST00000363399 108 ntBASIC-4.92□□□□□ -3.2
USP54Q70EL1 RNU6-279P-201ENST00000391297 101 ntBASIC-4.92□□□□□ -3.2
USP54Q70EL1 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.92□□□□□ -3.2
USP54Q70EL1 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.93□□□□□ -3.2
USP54Q70EL1 RNU6-59P-201ENST00000384787 107 ntBASIC-4.95□□□□□ -3.2
USP54Q70EL1 MIR4662A-201ENST00000637499 67 ntBASIC-4.96□□□□□ -3.2
USP54Q70EL1 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.96□□□□□ -3.2
USP54Q70EL1 Y_RNA.369-201ENST00000365568 117 ntBASIC-4.99□□□□□ -3.21
USP54Q70EL1 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.01□□□□□ -3.21
USP54Q70EL1 RNU6-829P-201ENST00000363700 112 ntBASIC-5.02□□□□□ -3.21
USP54Q70EL1 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.03□□□□□ -3.21
USP54Q70EL1 MIR5582-201ENST00000579697 68 ntBASIC-5.03□□□□□ -3.21
USP54Q70EL1 MIR3910-1-201ENST00000580936 111 ntBASIC-5.03□□□□□ -3.21
USP54Q70EL1 RNU6-573P-201ENST00000383938 106 ntBASIC-5.04□□□□□ -3.22
USP54Q70EL1 AL606753.1-201ENST00000427435 87 ntBASIC-5.05□□□□□ -3.22
USP54Q70EL1 RNU6-153P-201ENST00000364422 104 ntBASIC-5.05□□□□□ -3.22
USP54Q70EL1 SNORA26.2-201ENST00000390922 122 ntBASIC-5.06□□□□□ -3.22
USP54Q70EL1 MIR4719-201ENST00000585233 84 ntBASIC-5.11□□□□□ -3.23
USP54Q70EL1 MIR633-201ENST00000384821 98 ntBASIC-5.12□□□□□ -3.23
USP54Q70EL1 SNORD113-1-201ENST00000365321 69 ntBASIC-5.15□□□□□ -3.23
USP54Q70EL1 RNU6-753P-201ENST00000363926 107 ntBASIC-5.21□□□□□ -3.24
USP54Q70EL1 RNU6-986P-201ENST00000363133 102 ntBASIC-5.21□□□□□ -3.24
USP54Q70EL1 SNORD73B-201ENST00000364394 72 ntBASIC-5.25□□□□□ -3.25
USP54Q70EL1 AC099654.10-201ENST00000640395 161 ntBASIC-5.26□□□□□ -3.25
USP54Q70EL1 SNORD78.1-201ENST00000390866 65 ntBASIC-5.27□□□□□ -3.25
USP54Q70EL1 RNU6-627P-201ENST00000364032 102 ntBASIC-5.28□□□□□ -3.25
USP54Q70EL1 Y_RNA.388-201ENST00000383919 113 ntBASIC-5.33□□□□□ -3.26
USP54Q70EL1 RNY4P29-201ENST00000410801 97 ntBASIC-5.34□□□□□ -3.26
USP54Q70EL1 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.35□□□□□ -3.27
USP54Q70EL1 MIR3668-201ENST00000582138 75 ntBASIC-5.37□□□□□ -3.27
USP54Q70EL1 RNU6-499P-201ENST00000365615 107 ntBASIC-5.4□□□□□ -3.27
USP54Q70EL1 MIR3671-201ENST00000580455 88 ntBASIC-5.4□□□□□ -3.27
USP54Q70EL1 RNU6-930P-201ENST00000390938 100 ntBASIC-5.41□□□□□ -3.28
USP54Q70EL1 RNA5SP225-201ENST00000410874 135 ntBASIC-5.42□□□□□ -3.28
USP54Q70EL1 AC125388.1-201ENST00000459631 156 ntBASIC-5.43□□□□□ -3.28
USP54Q70EL1 MIR548F3-201ENST00000408509 87 ntBASIC-5.43□□□□□ -3.28
USP54Q70EL1 AC079150.2-201ENST00000443733 78 ntBASIC-5.46□□□□□ -3.28
USP54Q70EL1 RNU6-936P-201ENST00000384005 107 ntBASIC-5.5□□□□□ -3.29
USP54Q70EL1 RNU6-1275P-201ENST00000391087 107 ntBASIC-5.5□□□□□ -3.29
USP54Q70EL1 RNU6-620P-201ENST00000384017 96 ntBASIC-5.53□□□□□ -3.29
USP54Q70EL1 Y_RNA.685-201ENST00000516532 108 ntBASIC-5.56□□□□□ -3.3
USP54Q70EL1 MT-TR-201ENST00000387439 65 ntBASIC-5.58□□□□□ -3.3
USP54Q70EL1 snosnR66.1-201ENST00000391095 99 ntBASIC-5.6□□□□□ -3.31
USP54Q70EL1 RNA5SP170-201ENST00000517150 101 ntBASIC-5.6□□□□□ -3.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms