Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MIR3671-201ENST00000580455 88 ntBASIC-3.67□□□□□ -3
AP1S1P61966 AL359920.1-201ENST00000618332 176 ntBASIC-3.67□□□□□ -3
AP1S1P61966 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.67□□□□□ -3
AP1S1P61966 RNU6-857P-201ENST00000515893 110 ntBASIC-3.68□□□□□ -3
AP1S1P61966 RNU6-446P-201ENST00000362827 106 ntBASIC-3.69□□□□□ -3
AP1S1P61966 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.69□□□□□ -3
AP1S1P61966 SNORD115.2-201ENST00000391126 59 ntBASIC-3.69□□□□□ -3
AP1S1P61966 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.69□□□□□ -3
AP1S1P61966 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.69□□□□□ -3
AP1S1P61966 SNORD45C-201ENST00000383893 79 ntBASIC-3.71□□□□□ -3
AP1S1P61966 MIR1255A-201ENST00000408338 113 ntBASIC-3.71□□□□□ -3
AP1S1P61966 MIR548H4-201ENST00000408689 111 ntBASIC-3.71□□□□□ -3
AP1S1P61966 RNU6-854P-201ENST00000364036 107 ntBASIC-3.72□□□□□ -3
AP1S1P61966 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.72□□□□□ -3
AP1S1P61966 MIR3202-2-201ENST00000635980 79 ntBASIC-3.72□□□□□ -3
AP1S1P61966 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.73□□□□□ -3.01
AP1S1P61966 RNU6-573P-201ENST00000383938 106 ntBASIC-3.75□□□□□ -3.01
AP1S1P61966 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.75□□□□□ -3.01
AP1S1P61966 RNU6-836P-201ENST00000362920 107 ntBASIC-3.76□□□□□ -3.01
AP1S1P61966 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.76□□□□□ -3.01
AP1S1P61966 RNU6-279P-201ENST00000391297 101 ntBASIC-3.76□□□□□ -3.01
AP1S1P61966 RNY4-201ENST00000516507 96 ntBASIC-3.76□□□□□ -3.01
AP1S1P61966 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.77□□□□□ -3.01
AP1S1P61966 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.77□□□□□ -3.01
AP1S1P61966 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.78□□□□□ -3.01
AP1S1P61966 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.78□□□□□ -3.01
AP1S1P61966 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.8□□□□□ -3.02
AP1S1P61966 MIR548AL-201ENST00000578416 97 ntBASIC-3.8□□□□□ -3.02
AP1S1P61966 SNORD113-4-201ENST00000364802 75 ntBASIC-3.81□□□□□ -3.02
AP1S1P61966 SNORD114-13-201ENST00000364377 74 ntBASIC-3.82□□□□□ -3.02
AP1S1P61966 RNU4-33P-201ENST00000364316 85 ntBASIC-3.83□□□□□ -3.02
AP1S1P61966 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.83□□□□□ -3.02
AP1S1P61966 RNU6-776P-201ENST00000364403 104 ntBASIC-3.86□□□□□ -3.03
AP1S1P61966 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.86□□□□□ -3.03
AP1S1P61966 RNU6-471P-201ENST00000383944 106 ntBASIC-3.86□□□□□ -3.03
AP1S1P61966 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.86□□□□□ -3.03
AP1S1P61966 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.87□□□□□ -3.03
AP1S1P61966 AC114801.3-201ENST00000510231 177 ntBASIC-3.87□□□□□ -3.03
AP1S1P61966 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.87□□□□□ -3.03
AP1S1P61966 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.87□□□□□ -3.03
AP1S1P61966 SNORD73B-201ENST00000364394 72 ntBASIC-3.88□□□□□ -3.03
AP1S1P61966 MIR124-1-201ENST00000385275 85 ntBASIC-3.88□□□□□ -3.03
AP1S1P61966 SNORD115-45-201ENST00000391078 81 ntBASIC-3.88□□□□□ -3.03
AP1S1P61966 RNA5SP225-201ENST00000410874 135 ntBASIC-3.9□□□□□ -3.03
AP1S1P61966 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.91□□□□□ -3.04
AP1S1P61966 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.92□□□□□ -3.04
AP1S1P61966 RNY4P29-201ENST00000410801 97 ntBASIC-3.94□□□□□ -3.04
AP1S1P61966 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.96□□□□□ -3.04
AP1S1P61966 RNU6-788P-201ENST00000390967 104 ntBASIC-3.96□□□□□ -3.04
AP1S1P61966 RNU6-803P-201ENST00000516034 102 ntBASIC-3.96□□□□□ -3.04
AP1S1P61966 SNORA26.2-201ENST00000390922 122 ntBASIC-3.98□□□□□ -3.05
AP1S1P61966 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.99□□□□□ -3.05
AP1S1P61966 MIR509-1-201ENST00000385265 94 ntBASIC-3.99□□□□□ -3.05
AP1S1P61966 MIR509-2-201ENST00000390724 91 ntBASIC-3.99□□□□□ -3.05
AP1S1P61966 SNORD78.1-201ENST00000390866 65 ntBASIC-3.99□□□□□ -3.05
AP1S1P61966 RNU6-808P-201ENST00000391233 108 ntBASIC-3.99□□□□□ -3.05
AP1S1P61966 RNU6-829P-201ENST00000363700 112 ntBASIC-4□□□□□ -3.05
AP1S1P61966 MIR545-201ENST00000385085 106 ntBASIC-4□□□□□ -3.05
AP1S1P61966 MIR633-201ENST00000384821 98 ntBASIC-4.01□□□□□ -3.05
AP1S1P61966 MIR548AH-201ENST00000637109 76 ntBASIC-4.01□□□□□ -3.05
AP1S1P61966 MIR4662A-201ENST00000637499 67 ntBASIC-4.02□□□□□ -3.05
AP1S1P61966 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.09□□□□□ -3.06
AP1S1P61966 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.1□□□□□ -3.07
AP1S1P61966 AL603908.1-201ENST00000406098 201 ntBASIC-4.1□□□□□ -3.07
AP1S1P61966 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.11□□□□□ -3.07
AP1S1P61966 RNA5SP170-201ENST00000517150 101 ntBASIC-4.11□□□□□ -3.07
AP1S1P61966 RNU6-838P-201ENST00000363399 108 ntBASIC-4.12□□□□□ -3.07
AP1S1P61966 RNU6-422P-201ENST00000384632 107 ntBASIC-4.12□□□□□ -3.07
AP1S1P61966 RNA5SP106-201ENST00000517274 100 ntBASIC-4.14□□□□□ -3.07
AP1S1P61966 RNY4P10-201ENST00000365571 96 ntBASIC-4.15□□□□□ -3.07
AP1S1P61966 RNU6-986P-201ENST00000363133 102 ntBASIC-4.17□□□□□ -3.08
AP1S1P61966 RNU6-59P-201ENST00000384787 107 ntBASIC-4.17□□□□□ -3.08
AP1S1P61966 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.18□□□□□ -3.08
AP1S1P61966 U2.22-201ENST00000636441 106 ntBASIC-4.21□□□□□ -3.08
AP1S1P61966 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.23□□□□□ -3.09
AP1S1P61966 RNU6-987P-201ENST00000384759 104 ntBASIC-4.23□□□□□ -3.09
AP1S1P61966 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.23□□□□□ -3.09
AP1S1P61966 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.24□□□□□ -3.09
AP1S1P61966 AC079150.2-201ENST00000443733 78 ntBASIC-4.25□□□□□ -3.09
AP1S1P61966 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.31□□□□□ -3.1
AP1S1P61966 RNU6-753P-201ENST00000363926 107 ntBASIC-4.32□□□□□ -3.1
AP1S1P61966 RNU6-665P-201ENST00000384639 107 ntBASIC-4.37□□□□□ -3.11
AP1S1P61966 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.39□□□□□ -3.11
AP1S1P61966 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.39□□□□□ -3.11
AP1S1P61966 MIR1302-4-201ENST00000408701 150 ntBASIC-4.4□□□□□ -3.11
AP1S1P61966 MIR548F3-201ENST00000408509 87 ntBASIC-4.42□□□□□ -3.12
AP1S1P61966 RNU6-936P-201ENST00000384005 107 ntBASIC-4.43□□□□□ -3.12
AP1S1P61966 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.43□□□□□ -3.12
AP1S1P61966 RNU6-930P-201ENST00000390938 100 ntBASIC-4.43□□□□□ -3.12
AP1S1P61966 AC125388.1-201ENST00000459631 156 ntBASIC-4.43□□□□□ -3.12
AP1S1P61966 RNU6-499P-201ENST00000365615 107 ntBASIC-4.48□□□□□ -3.13
AP1S1P61966 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.53□□□□□ -3.13
AP1S1P61966 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.53□□□□□ -3.13
AP1S1P61966 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.55□□□□□ -3.14
AP1S1P61966 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.65□□□□□ -3.15
AP1S1P61966 RNA5SP449-201ENST00000516871 130 ntBASIC-4.66□□□□□ -3.16
AP1S1P61966 RNU4-85P-201ENST00000364675 123 ntBASIC-4.73□□□□□ -3.17
AP1S1P61966 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4.75□□□□□ -3.17
AP1S1P61966 RNU6-614P-201ENST00000384369 107 ntBASIC-4.77□□□□□ -3.17
AP1S1P61966 U6.59-201ENST00000615686 107 ntBASIC-4.77□□□□□ -3.17
Retrieved 100 of 98,524 protein–RNA pairs in 344.3 ms