Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.87□□□□□ -2.87
FOXA3P55318 SNORD115-45-201ENST00000391078 81 ntBASIC-2.87□□□□□ -2.87
FOXA3P55318 AC110620.1-201ENST00000416042 228 ntBASIC-2.87□□□□□ -2.87
FOXA3P55318 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.87□□□□□ -2.87
FOXA3P55318 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.88□□□□□ -2.87
FOXA3P55318 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.89□□□□□ -2.87
FOXA3P55318 RNU6-776P-201ENST00000364403 104 ntBASIC-2.9□□□□□ -2.87
FOXA3P55318 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.9□□□□□ -2.87
FOXA3P55318 MIR124-1-201ENST00000385275 85 ntBASIC-2.9□□□□□ -2.87
FOXA3P55318 MIR548H4-201ENST00000408689 111 ntBASIC-2.91□□□□□ -2.88
FOXA3P55318 RNU6-294P-201ENST00000364999 102 ntBASIC-2.92□□□□□ -2.88
FOXA3P55318 RNY4P10-201ENST00000365571 96 ntBASIC-2.92□□□□□ -2.88
FOXA3P55318 SNORD20-201ENST00000384550 80 ntBASIC-2.92□□□□□ -2.88
FOXA3P55318 RNU6-919P-201ENST00000516731 104 ntBASIC-2.92□□□□□ -2.88
FOXA3P55318 AC099654.10-201ENST00000640395 161 ntBASIC-2.92□□□□□ -2.88
FOXA3P55318 RNU6-215P-201ENST00000365169 102 ntBASIC-2.94□□□□□ -2.88
FOXA3P55318 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.94□□□□□ -2.88
FOXA3P55318 RNU6-820P-201ENST00000384273 107 ntBASIC-2.94□□□□□ -2.88
FOXA3P55318 MIR548AL-201ENST00000578416 97 ntBASIC-2.94□□□□□ -2.88
FOXA3P55318 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.95□□□□□ -2.88
FOXA3P55318 RNA5SP106-201ENST00000517274 100 ntBASIC-2.95□□□□□ -2.88
FOXA3P55318 RNU6-446P-201ENST00000362827 106 ntBASIC-2.96□□□□□ -2.88
FOXA3P55318 RNU6-406P-201ENST00000516470 107 ntBASIC-2.96□□□□□ -2.88
FOXA3P55318 RNU6-44P-201ENST00000384045 107 ntBASIC-2.97□□□□□ -2.88
FOXA3P55318 RNU4-33P-201ENST00000364316 85 ntBASIC-2.98□□□□□ -2.89
FOXA3P55318 MIR548M-201ENST00000408260 86 ntBASIC-2.98□□□□□ -2.89
FOXA3P55318 RNU6-788P-201ENST00000390967 104 ntBASIC-2.99□□□□□ -2.89
FOXA3P55318 Y_RNA.345-201ENST00000365384 92 ntBASIC-3□□□□□ -2.89
FOXA3P55318 RNU6-422P-201ENST00000384632 107 ntBASIC-3□□□□□ -2.89
FOXA3P55318 Y_RNA.657-201ENST00000515983 102 ntBASIC-3□□□□□ -2.89
FOXA3P55318 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.01□□□□□ -2.89
FOXA3P55318 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.01□□□□□ -2.89
FOXA3P55318 RNU6-987P-201ENST00000384759 104 ntBASIC-3.01□□□□□ -2.89
FOXA3P55318 AC114801.3-201ENST00000510231 177 ntBASIC-3.01□□□□□ -2.89
FOXA3P55318 MIR548AH-201ENST00000637109 76 ntBASIC-3.01□□□□□ -2.89
FOXA3P55318 RNU6-857P-201ENST00000515893 110 ntBASIC-3.02□□□□□ -2.89
FOXA3P55318 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.02□□□□□ -2.89
FOXA3P55318 MIR545-201ENST00000385085 106 ntBASIC-3.03□□□□□ -2.89
FOXA3P55318 MIR3910-1-201ENST00000580936 111 ntBASIC-3.03□□□□□ -2.89
FOXA3P55318 SNORD113-4-201ENST00000364802 75 ntBASIC-3.04□□□□□ -2.9
FOXA3P55318 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.04□□□□□ -2.9
FOXA3P55318 MIR1255A-201ENST00000408338 113 ntBASIC-3.05□□□□□ -2.9
FOXA3P55318 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.05□□□□□ -2.9
FOXA3P55318 MIR3202-2-201ENST00000635980 79 ntBASIC-3.05□□□□□ -2.9
FOXA3P55318 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.06□□□□□ -2.9
FOXA3P55318 RNU6-808P-201ENST00000391233 108 ntBASIC-3.07□□□□□ -2.9
FOXA3P55318 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.07□□□□□ -2.9
FOXA3P55318 RNU6-153P-201ENST00000364422 104 ntBASIC-3.08□□□□□ -2.9
FOXA3P55318 AL606753.1-201ENST00000427435 87 ntBASIC-3.08□□□□□ -2.9
FOXA3P55318 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.09□□□□□ -2.9
FOXA3P55318 RNU6-471P-201ENST00000383944 106 ntBASIC-3.09□□□□□ -2.9
FOXA3P55318 MIR5582-201ENST00000579697 68 ntBASIC-3.09□□□□□ -2.9
FOXA3P55318 RNU6-279P-201ENST00000391297 101 ntBASIC-3.1□□□□□ -2.91
FOXA3P55318 MIR4719-201ENST00000585233 84 ntBASIC-3.1□□□□□ -2.91
FOXA3P55318 RNU6-573P-201ENST00000383938 106 ntBASIC-3.11□□□□□ -2.91
FOXA3P55318 SNORD113-1-201ENST00000365321 69 ntBASIC-3.12□□□□□ -2.91
FOXA3P55318 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.13□□□□□ -2.91
FOXA3P55318 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.17□□□□□ -2.92
FOXA3P55318 RNU6-665P-201ENST00000384639 107 ntBASIC-3.17□□□□□ -2.92
FOXA3P55318 MIR3668-201ENST00000582138 75 ntBASIC-3.17□□□□□ -2.92
FOXA3P55318 RNU6-829P-201ENST00000363700 112 ntBASIC-3.18□□□□□ -2.92
FOXA3P55318 MIR633-201ENST00000384821 98 ntBASIC-3.18□□□□□ -2.92
FOXA3P55318 MT-TR-201ENST00000387439 65 ntBASIC-3.18□□□□□ -2.92
FOXA3P55318 RNU6-838P-201ENST00000363399 108 ntBASIC-3.2□□□□□ -2.92
FOXA3P55318 SNORA26.2-201ENST00000390922 122 ntBASIC-3.21□□□□□ -2.92
FOXA3P55318 RNA5SP225-201ENST00000410874 135 ntBASIC-3.21□□□□□ -2.92
FOXA3P55318 SNORD73B-201ENST00000364394 72 ntBASIC-3.22□□□□□ -2.92
FOXA3P55318 RNU6-59P-201ENST00000384787 107 ntBASIC-3.23□□□□□ -2.93
FOXA3P55318 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.23□□□□□ -2.93
FOXA3P55318 MIR4662A-201ENST00000637499 67 ntBASIC-3.23□□□□□ -2.93
FOXA3P55318 RNU6-986P-201ENST00000363133 102 ntBASIC-3.25□□□□□ -2.93
FOXA3P55318 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.26□□□□□ -2.93
FOXA3P55318 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.27□□□□□ -2.93
FOXA3P55318 SNORD78.1-201ENST00000390866 65 ntBASIC-3.27□□□□□ -2.93
FOXA3P55318 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.28□□□□□ -2.93
FOXA3P55318 snosnR66.1-201ENST00000391095 99 ntBASIC-3.28□□□□□ -2.93
FOXA3P55318 RNY4P29-201ENST00000410801 97 ntBASIC-3.28□□□□□ -2.93
FOXA3P55318 MIR3671-201ENST00000580455 88 ntBASIC-3.31□□□□□ -2.94
FOXA3P55318 RNU6-753P-201ENST00000363926 107 ntBASIC-3.35□□□□□ -2.95
FOXA3P55318 AC079150.2-201ENST00000443733 78 ntBASIC-3.37□□□□□ -2.95
FOXA3P55318 RNA5SP449-201ENST00000516871 130 ntBASIC-3.4□□□□□ -2.95
FOXA3P55318 RNU6-930P-201ENST00000390938 100 ntBASIC-3.43□□□□□ -2.96
FOXA3P55318 RNA5SP170-201ENST00000517150 101 ntBASIC-3.43□□□□□ -2.96
FOXA3P55318 RNU6-936P-201ENST00000384005 107 ntBASIC-3.45□□□□□ -2.96
FOXA3P55318 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.45□□□□□ -2.96
FOXA3P55318 RNU4-85P-201ENST00000364675 123 ntBASIC-3.47□□□□□ -2.96
FOXA3P55318 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.47□□□□□ -2.96
FOXA3P55318 MIR548F3-201ENST00000408509 87 ntBASIC-3.47□□□□□ -2.96
FOXA3P55318 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.48□□□□□ -2.97
FOXA3P55318 AC125388.1-201ENST00000459631 156 ntBASIC-3.48□□□□□ -2.97
FOXA3P55318 RNU6-499P-201ENST00000365615 107 ntBASIC-3.53□□□□□ -2.97
FOXA3P55318 RNU6-627P-201ENST00000364032 102 ntBASIC-3.54□□□□□ -2.98
FOXA3P55318 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.55□□□□□ -2.98
FOXA3P55318 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.56□□□□□ -2.98
FOXA3P55318 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.58□□□□□ -2.98
FOXA3P55318 AL603908.1-201ENST00000406098 201 ntBASIC-3.58□□□□□ -2.98
FOXA3P55318 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.58□□□□□ -2.98
FOXA3P55318 RNY4P13-201ENST00000384284 96 ntBASIC-3.62□□□□□ -2.99
FOXA3P55318 RNU6-620P-201ENST00000384017 96 ntBASIC-3.63□□□□□ -2.99
FOXA3P55318 SNORD111B-201ENST00000408587 80 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms