Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU7-120P-201ENST00000459334 63 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-1117P-201ENST00000384525 104 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-751P-201ENST00000516382 101 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-111P-201ENST00000517179 105 ntBASIC-7.77□□□□□ -3.65
VCANP13611 SNORD19B-201ENST00000459623 84 ntBASIC-7.78□□□□□ -3.65
VCANP13611 RNU6-635P-201ENST00000516651 102 ntBASIC-7.81□□□□□ -3.66
VCANP13611 Y_RNA.297-201ENST00000364950 91 ntBASIC-7.82□□□□□ -3.66
VCANP13611 RNU6-573P-201ENST00000383938 106 ntBASIC-7.83□□□□□ -3.66
VCANP13611 MIR3128-201ENST00000581957 66 ntBASIC-7.85□□□□□ -3.67
VCANP13611 Y_RNA.553-201ENST00000384670 102 ntBASIC-7.86□□□□□ -3.67
VCANP13611 RNU6-956P-201ENST00000458868 103 ntBASIC-7.87□□□□□ -3.67
VCANP13611 RNU6-985P-201ENST00000410182 104 ntBASIC-7.88□□□□□ -3.67
VCANP13611 Y_RNA.554-201ENST00000384672 102 ntBASIC-7.88□□□□□ -3.67
VCANP13611 AC006362.1-201ENST00000567392 174 ntBASIC-7.9□□□□□ -3.67
VCANP13611 Y_RNA.460-201ENST00000384255 102 ntBASIC-7.9□□□□□ -3.67
VCANP13611 RNA5SP225-201ENST00000410874 135 ntBASIC-7.93□□□□□ -3.68
VCANP13611 RNU6-875P-201ENST00000516488 106 ntBASIC-7.93□□□□□ -3.68
VCANP13611 SNORD78.1-201ENST00000390866 65 ntBASIC-7.94□□□□□ -3.68
VCANP13611 SNORA20.1-201ENST00000364790 130 ntBASIC-7.98□□□□□ -3.69
VCANP13611 RNU6-506P-201ENST00000516553 94 ntBASIC-7.99□□□□□ -3.69
VCANP13611 RNU6-1023P-201ENST00000516137 106 ntBASIC-7.99□□□□□ -3.69
VCANP13611 RNU6-1137P-201ENST00000517073 99 ntBASIC-8□□□□□ -3.69
VCANP13611 AL117351.2-201ENST00000513571 157 ntBASIC-8□□□□□ -3.69
VCANP13611 RNU7-200P-201ENST00000516105 62 ntBASIC-8□□□□□ -3.69
VCANP13611 Y_RNA.350-201ENST00000365409 98 ntBASIC-8.02□□□□□ -3.69
VCANP13611 AC009094.1-201ENST00000564443 426 ntBASIC-8.04□□□□□ -3.7
VCANP13611 MIR3688-2-201ENST00000636963 87 ntBASIC-8.06□□□□□ -3.7
VCANP13611 Y_RNA.261-201ENST00000364631 102 ntBASIC-8.08□□□□□ -3.7
VCANP13611 Y_RNA.160-201ENST00000363677 92 ntBASIC-8.09□□□□□ -3.7
VCANP13611 Y_RNA.574-201ENST00000384766 95 ntBASIC-8.09□□□□□ -3.7
VCANP13611 MIR1302-1-201ENST00000637932 143 ntBASIC-8.09□□□□□ -3.7
VCANP13611 SNORD42.2-201ENST00000365570 69 ntBASIC-8.1□□□□□ -3.71
VCANP13611 RNA5SP89-201ENST00000410300 108 ntBASIC-8.14□□□□□ -3.71
VCANP13611 Y_RNA.506-201ENST00000384494 102 ntBASIC-8.14□□□□□ -3.71
VCANP13611 RNU6-346P-201ENST00000516288 111 ntBASIC-8.15□□□□□ -3.71
VCANP13611 RNU6-1168P-201ENST00000390831 104 ntBASIC-8.15□□□□□ -3.71
VCANP13611 MIR548F4-201ENST00000408515 105 ntBASIC-8.15□□□□□ -3.71
VCANP13611 AC069439.1-201ENST00000494739 167 ntBASIC-8.16□□□□□ -3.72
VCANP13611 RNY3P1-201ENST00000365085 102 ntBASIC-8.2□□□□□ -3.72
VCANP13611 MIR1277-201ENST00000408536 78 ntBASIC-8.22□□□□□ -3.72
VCANP13611 AL365222.1-201ENST00000614661 98 ntBASIC-8.23□□□□□ -3.73
VCANP13611 Y_RNA.694-201ENST00000516677 117 ntBASIC-8.25□□□□□ -3.73
VCANP13611 RNU6-474P-201ENST00000384243 107 ntBASIC-8.28□□□□□ -3.74
VCANP13611 SNORD11.1-201ENST00000459482 85 ntBASIC-8.32□□□□□ -3.74
VCANP13611 RNY1P5-201ENST00000383890 115 ntBASIC-8.33□□□□□ -3.74
VCANP13611 MIR3908-201ENST00000579798 126 ntBASIC-8.34□□□□□ -3.74
VCANP13611 Y_RNA.369-201ENST00000365568 117 ntBASIC-8.34□□□□□ -3.74
VCANP13611 AC134503.1-201ENST00000633048 54 ntBASIC-8.34□□□□□ -3.74
VCANP13611 U4.5-201ENST00000617137 123 ntBASIC-8.35□□□□□ -3.75
VCANP13611 RNU6-718P-201ENST00000516166 105 ntBASIC-8.36□□□□□ -3.75
VCANP13611 Y_RNA.388-201ENST00000383919 113 ntBASIC-8.37□□□□□ -3.75
VCANP13611 MTATP8P1-201ENST00000467115 207 ntBASIC-8.37□□□□□ -3.75
VCANP13611 AC062037.2-201ENST00000610137 73 ntBASIC-8.38□□□□□ -3.75
VCANP13611 RNU6-886P-201ENST00000384319 105 ntBASIC-8.39□□□□□ -3.75
VCANP13611 RNU6-22P-201ENST00000384355 107 ntBASIC-8.39□□□□□ -3.75
VCANP13611 MIR5582-201ENST00000579697 68 ntBASIC-8.4□□□□□ -3.75
VCANP13611 Y_RNA.685-201ENST00000516532 108 ntBASIC-8.42□□□□□ -3.76
VCANP13611 RNU6-1212P-201ENST00000517023 104 ntBASIC-8.47□□□□□ -3.76
VCANP13611 AP001094.1-201ENST00000579805 193 ntBASIC-8.47□□□□□ -3.77
VCANP13611 RNU6-919P-201ENST00000516731 104 ntBASIC-8.47□□□□□ -3.77
VCANP13611 SNORD73B-201ENST00000364394 72 ntBASIC-8.49□□□□□ -3.77
VCANP13611 MIR3171-201ENST00000584270 74 ntBASIC-8.5□□□□□ -3.77
VCANP13611 RNU4-37P-201ENST00000410214 84 ntBASIC-8.51□□□□□ -3.77
VCANP13611 RNY4P29-201ENST00000410801 97 ntBASIC-8.52□□□□□ -3.77
VCANP13611 Y_RNA.489-201ENST00000384410 101 ntBASIC-8.53□□□□□ -3.77
VCANP13611 RNU2-16P-201ENST00000410712 136 ntBASIC-8.53□□□□□ -3.77
VCANP13611 Y_RNA.216-201ENST00000364205 93 ntBASIC-8.54□□□□□ -3.78
VCANP13611 RNU6-1154P-201ENST00000391001 104 ntBASIC-8.57□□□□□ -3.78
VCANP13611 Y_RNA.138-201ENST00000363462 102 ntBASIC-8.59□□□□□ -3.78
VCANP13611 Y_RNA.464-201ENST00000384282 110 ntBASIC-8.62□□□□□ -3.79
VCANP13611 RNU6-313P-201ENST00000516317 112 ntBASIC-8.66□□□□□ -3.8
VCANP13611 SNORD20-201ENST00000384550 80 ntBASIC-8.68□□□□□ -3.8
VCANP13611 Y_RNA.149-201ENST00000363558 117 ntBASIC-8.7□□□□□ -3.8
VCANP13611 RNU6-44P-201ENST00000384045 107 ntBASIC-8.73□□□□□ -3.81
VCANP13611 RNU6-215P-201ENST00000365169 102 ntBASIC-8.76□□□□□ -3.81
VCANP13611 Y_RNA.193-201ENST00000363979 102 ntBASIC-8.77□□□□□ -3.81
VCANP13611 Y_RNA.318-201ENST00000365131 97 ntBASIC-8.78□□□□□ -3.82
VCANP13611 MIR4795-201ENST00000584182 89 ntBASIC-8.79□□□□□ -3.82
VCANP13611 AC008737.2-201ENST00000599446 118 ntBASIC-8.81□□□□□ -3.82
VCANP13611 MTCYBP9-201ENST00000431021 303 ntBASIC-8.84□□□□□ -3.83
VCANP13611 RNU6-388P-201ENST00000517012 105 ntBASIC-8.86□□□□□ -3.83
VCANP13611 RNU6-389P-201ENST00000517048 105 ntBASIC-8.86□□□□□ -3.83
VCANP13611 MIR1302-4-201ENST00000408701 150 ntBASIC-8.88□□□□□ -3.83
VCANP13611 MIR568-201ENST00000385036 95 ntBASIC-8.93□□□□□ -3.84
VCANP13611 MIR4719-201ENST00000585233 84 ntBASIC-8.94□□□□□ -3.84
VCANP13611 RNU6-1160P-201ENST00000384546 104 ntBASIC-8.95□□□□□ -3.84
VCANP13611 MT-TD-201ENST00000387419 68 ntBASIC-8.96□□□□□ -3.84
VCANP13611 Y_RNA.703-201ENST00000516846 111 ntBASIC-8.98□□□□□ -3.85
VCANP13611 RNU6-584P-201ENST00000410350 95 ntBASIC-8.98□□□□□ -3.85
VCANP13611 MTATP6P25-201ENST00000574491 261 ntBASIC-9.04□□□□□ -3.86
VCANP13611 MIR3133-201ENST00000583157 78 ntBASIC-9.05□□□□□ -3.86
VCANP13611 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-9.1□□□□□ -3.87
VCANP13611 MIR620-201ENST00000385232 95 ntBASIC-9.14□□□□□ -3.87
VCANP13611 MIR3974-201ENST00000637126 96 ntBASIC-9.21□□□□□ -3.88
VCANP13611 MIR606-201ENST00000384851 96 ntBASIC-9.21□□□□□ -3.88
VCANP13611 MT-TG-201ENST00000387429 68 ntBASIC-9.26□□□□□ -3.89
VCANP13611 Y_RNA.717-201ENST00000517106 92 ntBASIC-9.27□□□□□ -3.89
VCANP13611 MIR4503-201ENST00000582187 83 ntBASIC-9.3□□□□□ -3.9
VCANP13611 MTCYBP6-201ENST00000441810 138 ntBASIC-9.32□□□□□ -3.9
VCANP13611 RNA5SP170-201ENST00000517150 101 ntBASIC-9.36□□□□□ -3.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms