Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-215P-201ENST00000365169 102 ntBASIC-5.71□□□□□ -3.32
TPM1P09493 MIR548M-201ENST00000408260 86 ntBASIC-5.72□□□□□ -3.33
TPM1P09493 SNORD115.2-201ENST00000391126 59 ntBASIC-5.73□□□□□ -3.33
TPM1P09493 Y_RNA.566-201ENST00000384735 101 ntBASIC-5.76□□□□□ -3.33
TPM1P09493 RNU6-1121P-201ENST00000516802 109 ntBASIC-5.76□□□□□ -3.33
TPM1P09493 RNU6-836P-201ENST00000362920 107 ntBASIC-5.77□□□□□ -3.33
TPM1P09493 SNORD20-201ENST00000384550 80 ntBASIC-5.77□□□□□ -3.33
TPM1P09493 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.77□□□□□ -3.33
TPM1P09493 SNORD115-45-201ENST00000391078 81 ntBASIC-5.78□□□□□ -3.33
TPM1P09493 Y_RNA.511-201ENST00000384514 103 ntBASIC-5.79□□□□□ -3.34
TPM1P09493 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.8□□□□□ -3.34
TPM1P09493 RNU6-820P-201ENST00000384273 107 ntBASIC-5.81□□□□□ -3.34
TPM1P09493 AC110620.1-201ENST00000416042 228 ntBASIC-5.82□□□□□ -3.34
TPM1P09493 RNU6-294P-201ENST00000364999 102 ntBASIC-5.83□□□□□ -3.34
TPM1P09493 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.84□□□□□ -3.34
TPM1P09493 MIR3910-1-201ENST00000580936 111 ntBASIC-5.84□□□□□ -3.34
TPM1P09493 Y_RNA.335-201ENST00000365299 96 ntBASIC-5.85□□□□□ -3.35
TPM1P09493 SNORD113-1-201ENST00000365321 69 ntBASIC-5.85□□□□□ -3.35
TPM1P09493 RNA5SP106-201ENST00000517274 100 ntBASIC-5.87□□□□□ -3.35
TPM1P09493 MIR124-1-201ENST00000385275 85 ntBASIC-5.88□□□□□ -3.35
TPM1P09493 RNU6-987P-201ENST00000384759 104 ntBASIC-5.89□□□□□ -3.35
TPM1P09493 MIR548H4-201ENST00000408689 111 ntBASIC-5.9□□□□□ -3.35
TPM1P09493 RNY4P10-201ENST00000365571 96 ntBASIC-5.93□□□□□ -3.36
TPM1P09493 RNU6-406P-201ENST00000516470 107 ntBASIC-5.93□□□□□ -3.36
TPM1P09493 RNU6-44P-201ENST00000384045 107 ntBASIC-5.94□□□□□ -3.36
TPM1P09493 Y_RNA.657-201ENST00000515983 102 ntBASIC-5.95□□□□□ -3.36
TPM1P09493 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.95□□□□□ -3.36
TPM1P09493 MIR3668-201ENST00000582138 75 ntBASIC-5.96□□□□□ -3.36
TPM1P09493 RNU6-776P-201ENST00000364403 104 ntBASIC-5.97□□□□□ -3.37
TPM1P09493 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.97□□□□□ -3.37
TPM1P09493 RNU6-153P-201ENST00000364422 104 ntBASIC-6□□□□□ -3.37
TPM1P09493 MIR548AH-201ENST00000637109 76 ntBASIC-6□□□□□ -3.37
TPM1P09493 MIR3202-2-201ENST00000635980 79 ntBASIC-6.01□□□□□ -3.37
TPM1P09493 RNU6-1312P-201ENST00000362425 108 ntBASIC-6.02□□□□□ -3.37
TPM1P09493 snosnR66.1-201ENST00000391095 99 ntBASIC-6.04□□□□□ -3.38
TPM1P09493 RNU6-1326P-201ENST00000391262 107 ntBASIC-6.04□□□□□ -3.38
TPM1P09493 RNU6-788P-201ENST00000390967 104 ntBASIC-6.05□□□□□ -3.38
TPM1P09493 MIR548AL-201ENST00000578416 97 ntBASIC-6.05□□□□□ -3.38
TPM1P09493 RNU6-857P-201ENST00000515893 110 ntBASIC-6.08□□□□□ -3.38
TPM1P09493 AL606753.1-201ENST00000427435 87 ntBASIC-6.1□□□□□ -3.39
TPM1P09493 Y_RNA.81-201ENST00000362997 102 ntBASIC-6.14□□□□□ -3.39
TPM1P09493 Y_RNA.345-201ENST00000365384 92 ntBASIC-6.14□□□□□ -3.39
TPM1P09493 RNU6-446P-201ENST00000362827 106 ntBASIC-6.15□□□□□ -3.39
TPM1P09493 Y_RNA.369-201ENST00000365568 117 ntBASIC-6.15□□□□□ -3.39
TPM1P09493 RNU6-279P-201ENST00000391297 101 ntBASIC-6.15□□□□□ -3.39
TPM1P09493 RNU6-422P-201ENST00000384632 107 ntBASIC-6.16□□□□□ -3.4
TPM1P09493 AC114801.3-201ENST00000510231 177 ntBASIC-6.16□□□□□ -3.4
TPM1P09493 MT-TR-201ENST00000387439 65 ntBASIC-6.17□□□□□ -3.4
TPM1P09493 RNU6-1008P-201ENST00000384160 104 ntBASIC-6.18□□□□□ -3.4
TPM1P09493 RNU4-33P-201ENST00000364316 85 ntBASIC-6.19□□□□□ -3.4
TPM1P09493 MIR545-201ENST00000385085 106 ntBASIC-6.19□□□□□ -3.4
TPM1P09493 MIR5582-201ENST00000579697 68 ntBASIC-6.19□□□□□ -3.4
TPM1P09493 RNU6-1204P-201ENST00000363948 107 ntBASIC-6.2□□□□□ -3.4
TPM1P09493 RNU6-471P-201ENST00000383944 106 ntBASIC-6.22□□□□□ -3.41
TPM1P09493 MIR1255A-201ENST00000408338 113 ntBASIC-6.24□□□□□ -3.41
TPM1P09493 MIR3671-201ENST00000580455 88 ntBASIC-6.24□□□□□ -3.41
TPM1P09493 RNU6-808P-201ENST00000391233 108 ntBASIC-6.26□□□□□ -3.41
TPM1P09493 Y_RNA.386-201ENST00000383913 105 ntBASIC-6.28□□□□□ -3.41
TPM1P09493 Y_RNA.565-201ENST00000384719 101 ntBASIC-6.28□□□□□ -3.41
TPM1P09493 RNU6-665P-201ENST00000384639 107 ntBASIC-6.3□□□□□ -3.42
TPM1P09493 SNORD113-4-201ENST00000364802 75 ntBASIC-6.34□□□□□ -3.42
TPM1P09493 RNU6-573P-201ENST00000383938 106 ntBASIC-6.4□□□□□ -3.43
TPM1P09493 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.46□□□□□ -3.44
TPM1P09493 MIR4662A-201ENST00000637499 67 ntBASIC-6.5□□□□□ -3.45
TPM1P09493 SNORA26.2-201ENST00000390922 122 ntBASIC-6.51□□□□□ -3.45
TPM1P09493 SNORD73B-201ENST00000364394 72 ntBASIC-6.52□□□□□ -3.45
TPM1P09493 RNU6-838P-201ENST00000363399 108 ntBASIC-6.57□□□□□ -3.46
TPM1P09493 RNU6-829P-201ENST00000363700 112 ntBASIC-6.57□□□□□ -3.46
TPM1P09493 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.57□□□□□ -3.46
TPM1P09493 RNU6-59P-201ENST00000384787 107 ntBASIC-6.57□□□□□ -3.46
TPM1P09493 RNY4P29-201ENST00000410801 97 ntBASIC-6.58□□□□□ -3.46
TPM1P09493 SNORD78.1-201ENST00000390866 65 ntBASIC-6.59□□□□□ -3.46
TPM1P09493 RNA5SP225-201ENST00000410874 135 ntBASIC-6.59□□□□□ -3.46
TPM1P09493 MIR633-201ENST00000384821 98 ntBASIC-6.64□□□□□ -3.47
TPM1P09493 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-6.65□□□□□ -3.47
TPM1P09493 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.66□□□□□ -3.48
TPM1P09493 Y_RNA.406-201ENST00000383984 100 ntBASIC-6.69□□□□□ -3.48
TPM1P09493 RNU6-986P-201ENST00000363133 102 ntBASIC-6.71□□□□□ -3.48
TPM1P09493 AL603908.1-201ENST00000406098 201 ntBASIC-6.81□□□□□ -3.5
TPM1P09493 RNA5SP170-201ENST00000517150 101 ntBASIC-6.82□□□□□ -3.5
TPM1P09493 Y_RNA.520-201ENST00000384556 102 ntBASIC-6.85□□□□□ -3.51
TPM1P09493 RNU4-85P-201ENST00000364675 123 ntBASIC-6.87□□□□□ -3.51
TPM1P09493 AC079150.2-201ENST00000443733 78 ntBASIC-6.91□□□□□ -3.52
TPM1P09493 RNA5SP449-201ENST00000516871 130 ntBASIC-6.93□□□□□ -3.52
TPM1P09493 RNU6-1298P-201ENST00000362456 101 ntBASIC-6.95□□□□□ -3.52
TPM1P09493 RNU6-753P-201ENST00000363926 107 ntBASIC-6.99□□□□□ -3.53
TPM1P09493 RNU6-1024P-201ENST00000384199 107 ntBASIC-7.08□□□□□ -3.54
TPM1P09493 RNU6-930P-201ENST00000390938 100 ntBASIC-7.09□□□□□ -3.54
TPM1P09493 MIR548F3-201ENST00000408509 87 ntBASIC-7.09□□□□□ -3.54
TPM1P09493 MIR1302-4-201ENST00000408701 150 ntBASIC-7.1□□□□□ -3.55
TPM1P09493 AC125388.1-201ENST00000459631 156 ntBASIC-7.11□□□□□ -3.55
TPM1P09493 Y_RNA.685-201ENST00000516532 108 ntBASIC-7.13□□□□□ -3.55
TPM1P09493 Y_RNA.165-201ENST00000363721 102 ntBASIC-7.18□□□□□ -3.56
TPM1P09493 U2.22-201ENST00000636441 106 ntBASIC-7.19□□□□□ -3.56
TPM1P09493 RNU6-627P-201ENST00000364032 102 ntBASIC-7.2□□□□□ -3.56
TPM1P09493 RNU6-936P-201ENST00000384005 107 ntBASIC-7.21□□□□□ -3.56
TPM1P09493 RNU6-499P-201ENST00000365615 107 ntBASIC-7.26□□□□□ -3.57
TPM1P09493 RNY4P13-201ENST00000384284 96 ntBASIC-7.27□□□□□ -3.57
TPM1P09493 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-7.29□□□□□ -3.58
TPM1P09493 RNU6-620P-201ENST00000384017 96 ntBASIC-7.4□□□□□ -3.59
Retrieved 100 of 98,524 protein–RNA pairs in 280.4 ms