Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.07□□□□□ -2.74
PCDHGA1Q9Y5H4 RNU6-122P-201ENST00000516818 107 ntBASIC-2.07□□□□□ -2.74
PCDHGA1Q9Y5H4 MIR3123-201ENST00000583417 75 ntBASIC-2.08□□□□□ -2.74
PCDHGA1Q9Y5H4 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.09□□□□□ -2.74
PCDHGA1Q9Y5H4 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.09□□□□□ -2.74
PCDHGA1Q9Y5H4 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.09□□□□□ -2.74
PCDHGA1Q9Y5H4 RNU6-974P-201ENST00000384099 108 ntBASIC-2.09□□□□□ -2.74
PCDHGA1Q9Y5H4 AC005520.4-201ENST00000604337 90 ntBASIC-2.09□□□□□ -2.74
PCDHGA1Q9Y5H4 RNU6-810P-201ENST00000364001 107 ntBASIC-2.1□□□□□ -2.75
PCDHGA1Q9Y5H4 RNU6-649P-201ENST00000384463 107 ntBASIC-2.1□□□□□ -2.75
PCDHGA1Q9Y5H4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.1□□□□□ -2.75
PCDHGA1Q9Y5H4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.1□□□□□ -2.75
PCDHGA1Q9Y5H4 RNU6-194P-201ENST00000363862 105 ntBASIC-2.11□□□□□ -2.75
PCDHGA1Q9Y5H4 RNU6-828P-201ENST00000364876 107 ntBASIC-2.11□□□□□ -2.75
PCDHGA1Q9Y5H4 SNORD78.1-201ENST00000390866 65 ntBASIC-2.11□□□□□ -2.75
PCDHGA1Q9Y5H4 MIR548AM-201ENST00000584298 74 ntBASIC-2.11□□□□□ -2.75
PCDHGA1Q9Y5H4 SNORD116.2-201ENST00000391251 93 ntBASIC-2.12□□□□□ -2.75
PCDHGA1Q9Y5H4 RNU6-539P-201ENST00000516665 103 ntBASIC-2.12□□□□□ -2.75
PCDHGA1Q9Y5H4 MIR4511-201ENST00000582784 87 ntBASIC-2.12□□□□□ -2.75
PCDHGA1Q9Y5H4 U6.111-201ENST00000636093 83 ntBASIC-2.12□□□□□ -2.75
PCDHGA1Q9Y5H4 AC013734.1-201ENST00000619329 111 ntBASIC-2.14□□□□□ -2.75
PCDHGA1Q9Y5H4 AC103706.3-201ENST00000636297 85 ntBASIC-2.14□□□□□ -2.75
PCDHGA1Q9Y5H4 MIR1302-4-201ENST00000408701 150 ntBASIC-2.15□□□□□ -2.75
PCDHGA1Q9Y5H4 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.16□□□□□ -2.76
PCDHGA1Q9Y5H4 SNORA40B-201ENST00000385573 128 ntBASIC-2.16□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU7-119P-201ENST00000459279 63 ntBASIC-2.16□□□□□ -2.76
PCDHGA1Q9Y5H4 RNY3P8-201ENST00000411366 126 ntBASIC-2.17□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.17□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU6-940P-201ENST00000363433 104 ntBASIC-2.18□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU6-520P-201ENST00000384717 104 ntBASIC-2.18□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.19□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.2□□□□□ -2.76
PCDHGA1Q9Y5H4 RNU4-88P-201ENST00000411220 86 ntBASIC-2.2□□□□□ -2.76
PCDHGA1Q9Y5H4 MIR4679-1-201ENST00000637619 75 ntBASIC-2.2□□□□□ -2.76
PCDHGA1Q9Y5H4 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.21□□□□□ -2.76
PCDHGA1Q9Y5H4 RNA5SP225-201ENST00000410874 135 ntBASIC-2.21□□□□□ -2.76
PCDHGA1Q9Y5H4 SNORA40.16-201ENST00000517238 121 ntBASIC-2.22□□□□□ -2.76
PCDHGA1Q9Y5H4 U6.97-201ENST00000636904 101 ntBASIC-2.23□□□□□ -2.77
PCDHGA1Q9Y5H4 MIR4662A-201ENST00000637499 67 ntBASIC-2.23□□□□□ -2.77
PCDHGA1Q9Y5H4 RNU6-800P-201ENST00000384473 103 ntBASIC-2.24□□□□□ -2.77
PCDHGA1Q9Y5H4 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.24□□□□□ -2.77
PCDHGA1Q9Y5H4 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.25□□□□□ -2.77
PCDHGA1Q9Y5H4 MIR3938-201ENST00000582157 103 ntBASIC-2.25□□□□□ -2.77
PCDHGA1Q9Y5H4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.25□□□□□ -2.77
PCDHGA1Q9Y5H4 RNU6-776P-201ENST00000364403 104 ntBASIC-2.26□□□□□ -2.77
PCDHGA1Q9Y5H4 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.26□□□□□ -2.77
PCDHGA1Q9Y5H4 SNORD60-201ENST00000383903 83 ntBASIC-2.27□□□□□ -2.77
PCDHGA1Q9Y5H4 MIR466-201ENST00000580653 84 ntBASIC-2.28□□□□□ -2.77
PCDHGA1Q9Y5H4 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.28□□□□□ -2.77
PCDHGA1Q9Y5H4 SNORD45.2-201ENST00000363552 72 ntBASIC-2.29□□□□□ -2.78
PCDHGA1Q9Y5H4 SNORD18C-201ENST00000362704 69 ntBASIC-2.3□□□□□ -2.78
PCDHGA1Q9Y5H4 MIR202-201ENST00000362219 110 ntBASIC-2.31□□□□□ -2.78
PCDHGA1Q9Y5H4 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.31□□□□□ -2.78
PCDHGA1Q9Y5H4 RNU6-361P-201ENST00000364454 107 ntBASIC-2.31□□□□□ -2.78
PCDHGA1Q9Y5H4 SNORA17.4-201ENST00000391287 132 ntBASIC-2.33□□□□□ -2.78
PCDHGA1Q9Y5H4 AC110620.1-201ENST00000416042 228 ntBASIC-2.33□□□□□ -2.78
PCDHGA1Q9Y5H4 AL451105.1-201ENST00000450005 189 ntBASIC-2.33□□□□□ -2.78
PCDHGA1Q9Y5H4 MIR548N-201ENST00000408742 75 ntBASIC-2.34□□□□□ -2.78
PCDHGA1Q9Y5H4 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.34□□□□□ -2.78
PCDHGA1Q9Y5H4 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.35□□□□□ -2.79
PCDHGA1Q9Y5H4 RNU6-530P-201ENST00000391180 107 ntBASIC-2.35□□□□□ -2.79
PCDHGA1Q9Y5H4 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.35□□□□□ -2.79
PCDHGA1Q9Y5H4 MIR548W-201ENST00000581970 74 ntBASIC-2.35□□□□□ -2.79
PCDHGA1Q9Y5H4 RNU6-230P-201ENST00000362457 104 ntBASIC-2.36□□□□□ -2.79
PCDHGA1Q9Y5H4 snoU13.10-201ENST00000459301 103 ntBASIC-2.36□□□□□ -2.79
PCDHGA1Q9Y5H4 MIR4748-201ENST00000578076 82 ntBASIC-2.36□□□□□ -2.79
PCDHGA1Q9Y5H4 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.37□□□□□ -2.79
PCDHGA1Q9Y5H4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
PCDHGA1Q9Y5H4 MIR581-201ENST00000384895 96 ntBASIC-2.38□□□□□ -2.79
PCDHGA1Q9Y5H4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.38□□□□□ -2.79
PCDHGA1Q9Y5H4 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.39□□□□□ -2.79
PCDHGA1Q9Y5H4 RNU6-419P-201ENST00000517030 63 ntBASIC-2.4□□□□□ -2.79
PCDHGA1Q9Y5H4 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.41□□□□□ -2.8
PCDHGA1Q9Y5H4 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.41□□□□□ -2.8
PCDHGA1Q9Y5H4 FTX_4.1-201ENST00000616291 147 ntBASIC-2.41□□□□□ -2.8
PCDHGA1Q9Y5H4 RNU6-471P-201ENST00000383944 106 ntBASIC-2.42□□□□□ -2.8
PCDHGA1Q9Y5H4 RNU6-803P-201ENST00000516034 102 ntBASIC-2.43□□□□□ -2.8
PCDHGA1Q9Y5H4 AC097484.2-201ENST00000509147 251 ntBASIC-2.46□□□□□ -2.8
PCDHGA1Q9Y5H4 AC114801.3-201ENST00000510231 177 ntBASIC-2.46□□□□□ -2.8
PCDHGA1Q9Y5H4 MIR4426-201ENST00000640330 63 ntBASIC-2.46□□□□□ -2.8
PCDHGA1Q9Y5H4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
PCDHGA1Q9Y5H4 RNU6-176P-201ENST00000517196 105 ntBASIC-2.49□□□□□ -2.81
PCDHGA1Q9Y5H4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.49□□□□□ -2.81
PCDHGA1Q9Y5H4 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.51□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.52□□□□□ -2.81
PCDHGA1Q9Y5H4 RNY4P9-201ENST00000363194 97 ntBASIC-2.53□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.53□□□□□ -2.81
PCDHGA1Q9Y5H4 RNU6-300P-201ENST00000459080 104 ntBASIC-2.53□□□□□ -2.81
PCDHGA1Q9Y5H4 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.53□□□□□ -2.81
PCDHGA1Q9Y5H4 MIR379-201ENST00000362218 67 ntBASIC-2.54□□□□□ -2.82
PCDHGA1Q9Y5H4 RNU6-590P-201ENST00000365039 107 ntBASIC-2.55□□□□□ -2.82
PCDHGA1Q9Y5H4 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.55□□□□□ -2.82
PCDHGA1Q9Y5H4 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.57□□□□□ -2.82
PCDHGA1Q9Y5H4 MIR548X-201ENST00000580069 75 ntBASIC-2.57□□□□□ -2.82
PCDHGA1Q9Y5H4 RNU6-68P-201ENST00000516576 104 ntBASIC-2.6□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 312 ms