Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC091912.2-201ENST00000624798 167 ntBASIC-1.61□□□□□ -2.67
PCDHGA9Q9Y5G4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.62□□□□□ -2.67
PCDHGA9Q9Y5G4 RNU6-118P-201ENST00000516552 102 ntBASIC-1.62□□□□□ -2.67
PCDHGA9Q9Y5G4 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.64□□□□□ -2.67
PCDHGA9Q9Y5G4 MIR6874-201ENST00000635894 71 ntBASIC-1.64□□□□□ -2.67
PCDHGA9Q9Y5G4 RNU6-258P-201ENST00000390884 101 ntBASIC-1.67□□□□□ -2.68
PCDHGA9Q9Y5G4 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.68□□□□□ -2.68
PCDHGA9Q9Y5G4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
PCDHGA9Q9Y5G4 MIR548H1-201ENST00000408610 102 ntBASIC-1.68□□□□□ -2.68
PCDHGA9Q9Y5G4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.68□□□□□ -2.68
PCDHGA9Q9Y5G4 RNU6-980P-201ENST00000516925 103 ntBASIC-1.69□□□□□ -2.68
PCDHGA9Q9Y5G4 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.7□□□□□ -2.68
PCDHGA9Q9Y5G4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.7□□□□□ -2.68
PCDHGA9Q9Y5G4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.72□□□□□ -2.68
PCDHGA9Q9Y5G4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.73□□□□□ -2.69
PCDHGA9Q9Y5G4 AC139453.2-201ENST00000487255 133 ntBASIC-1.73□□□□□ -2.69
PCDHGA9Q9Y5G4 RNA5SP93-201ENST00000362525 114 ntBASIC-1.74□□□□□ -2.69
PCDHGA9Q9Y5G4 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.74□□□□□ -2.69
PCDHGA9Q9Y5G4 MIR487B-201ENST00000385021 84 ntBASIC-1.74□□□□□ -2.69
PCDHGA9Q9Y5G4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.74□□□□□ -2.69
PCDHGA9Q9Y5G4 AC108019.1-201ENST00000512540 175 ntBASIC-1.74□□□□□ -2.69
PCDHGA9Q9Y5G4 AL451105.1-201ENST00000450005 189 ntBASIC-1.75□□□□□ -2.69
PCDHGA9Q9Y5G4 SNORD54-201ENST00000459159 67 ntBASIC-1.75□□□□□ -2.69
PCDHGA9Q9Y5G4 MIR4756-201ENST00000577874 78 ntBASIC-1.75□□□□□ -2.69
PCDHGA9Q9Y5G4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.76□□□□□ -2.69
PCDHGA9Q9Y5G4 AC120024.2-201ENST00000576526 175 ntBASIC-1.76□□□□□ -2.69
PCDHGA9Q9Y5G4 MIR664B-201ENST00000626756 61 ntBASIC-1.76□□□□□ -2.69
PCDHGA9Q9Y5G4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
PCDHGA9Q9Y5G4 RNU6-419P-201ENST00000517030 63 ntBASIC-1.77□□□□□ -2.69
PCDHGA9Q9Y5G4 MIR3139-201ENST00000579145 76 ntBASIC-1.77□□□□□ -2.69
PCDHGA9Q9Y5G4 RNY4P7-201ENST00000364600 96 ntBASIC-1.78□□□□□ -2.69
PCDHGA9Q9Y5G4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.81□□□□□ -2.7
PCDHGA9Q9Y5G4 SNORD60-201ENST00000383903 83 ntBASIC-1.83□□□□□ -2.7
PCDHGA9Q9Y5G4 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.84□□□□□ -2.7
PCDHGA9Q9Y5G4 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.84□□□□□ -2.7
PCDHGA9Q9Y5G4 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.84□□□□□ -2.7
PCDHGA9Q9Y5G4 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.85□□□□□ -2.71
PCDHGA9Q9Y5G4 MT-TM-201ENST00000387377 68 ntBASIC-1.85□□□□□ -2.71
PCDHGA9Q9Y5G4 MIR548X-201ENST00000580069 75 ntBASIC-1.85□□□□□ -2.71
PCDHGA9Q9Y5G4 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.86□□□□□ -2.71
PCDHGA9Q9Y5G4 RNU6-446P-201ENST00000362827 106 ntBASIC-1.87□□□□□ -2.71
PCDHGA9Q9Y5G4 RNU6-788P-201ENST00000390967 104 ntBASIC-1.87□□□□□ -2.71
PCDHGA9Q9Y5G4 RNA5SP405-201ENST00000363059 114 ntBASIC-1.88□□□□□ -2.71
PCDHGA9Q9Y5G4 RNU6-361P-201ENST00000364454 107 ntBASIC-1.88□□□□□ -2.71
PCDHGA9Q9Y5G4 RNU6-530P-201ENST00000391180 107 ntBASIC-1.88□□□□□ -2.71
PCDHGA9Q9Y5G4 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
PCDHGA9Q9Y5G4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.9□□□□□ -2.71
PCDHGA9Q9Y5G4 MIR633-201ENST00000384821 98 ntBASIC-1.9□□□□□ -2.71
PCDHGA9Q9Y5G4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.9□□□□□ -2.71
PCDHGA9Q9Y5G4 RNU6-829P-201ENST00000363700 112 ntBASIC-1.92□□□□□ -2.72
PCDHGA9Q9Y5G4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.92□□□□□ -2.72
PCDHGA9Q9Y5G4 RNU6-499P-201ENST00000365615 107 ntBASIC-1.92□□□□□ -2.72
PCDHGA9Q9Y5G4 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.93□□□□□ -2.72
PCDHGA9Q9Y5G4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.93□□□□□ -2.72
PCDHGA9Q9Y5G4 RNY4-201ENST00000516507 96 ntBASIC-1.93□□□□□ -2.72
PCDHGA9Q9Y5G4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.95□□□□□ -2.72
PCDHGA9Q9Y5G4 RNU6-176P-201ENST00000517196 105 ntBASIC-1.95□□□□□ -2.72
PCDHGA9Q9Y5G4 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.95□□□□□ -2.72
PCDHGA9Q9Y5G4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.95□□□□□ -2.72
PCDHGA9Q9Y5G4 MIR202-201ENST00000362219 110 ntBASIC-1.96□□□□□ -2.72
PCDHGA9Q9Y5G4 AC079150.2-201ENST00000443733 78 ntBASIC-1.96□□□□□ -2.72
PCDHGA9Q9Y5G4 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.96□□□□□ -2.72
PCDHGA9Q9Y5G4 AC013734.1-201ENST00000619329 111 ntBASIC-1.96□□□□□ -2.72
PCDHGA9Q9Y5G4 SNORD18C-201ENST00000362704 69 ntBASIC-1.97□□□□□ -2.72
PCDHGA9Q9Y5G4 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.97□□□□□ -2.72
PCDHGA9Q9Y5G4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.97□□□□□ -2.72
PCDHGA9Q9Y5G4 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.99□□□□□ -2.73
PCDHGA9Q9Y5G4 MIR548N-201ENST00000408742 75 ntBASIC-2□□□□□ -2.73
PCDHGA9Q9Y5G4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2□□□□□ -2.73
PCDHGA9Q9Y5G4 RNU6-194P-201ENST00000363862 105 ntBASIC-2.01□□□□□ -2.73
PCDHGA9Q9Y5G4 U6.97-201ENST00000636904 101 ntBASIC-2.02□□□□□ -2.73
PCDHGA9Q9Y5G4 MIR4426-201ENST00000640330 63 ntBASIC-2.02□□□□□ -2.73
PCDHGA9Q9Y5G4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.03□□□□□ -2.73
PCDHGA9Q9Y5G4 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.04□□□□□ -2.74
PCDHGA9Q9Y5G4 SNORD113-4-201ENST00000364802 75 ntBASIC-2.06□□□□□ -2.74
PCDHGA9Q9Y5G4 RNU4-33P-201ENST00000364316 85 ntBASIC-2.08□□□□□ -2.74
PCDHGA9Q9Y5G4 RNU6-300P-201ENST00000459080 104 ntBASIC-2.08□□□□□ -2.74
PCDHGA9Q9Y5G4 MIR3123-201ENST00000583417 75 ntBASIC-2.08□□□□□ -2.74
PCDHGA9Q9Y5G4 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.09□□□□□ -2.74
PCDHGA9Q9Y5G4 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
PCDHGA9Q9Y5G4 RNU6-841P-201ENST00000383872 107 ntBASIC-2.12□□□□□ -2.75
PCDHGA9Q9Y5G4 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.13□□□□□ -2.75
PCDHGA9Q9Y5G4 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.13□□□□□ -2.75
PCDHGA9Q9Y5G4 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.14□□□□□ -2.75
PCDHGA9Q9Y5G4 MIR379-201ENST00000362218 67 ntBASIC-2.15□□□□□ -2.75
PCDHGA9Q9Y5G4 RNU4-88P-201ENST00000411220 86 ntBASIC-2.15□□□□□ -2.75
PCDHGA9Q9Y5G4 MIR548AM-201ENST00000584298 74 ntBASIC-2.15□□□□□ -2.75
PCDHGA9Q9Y5G4 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.16□□□□□ -2.76
PCDHGA9Q9Y5G4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.19□□□□□ -2.76
PCDHGA9Q9Y5G4 RNU6-742P-201ENST00000365289 107 ntBASIC-2.2□□□□□ -2.76
PCDHGA9Q9Y5G4 MIR581-201ENST00000384895 96 ntBASIC-2.21□□□□□ -2.76
PCDHGA9Q9Y5G4 RNU6-614P-201ENST00000384369 107 ntBASIC-2.22□□□□□ -2.76
PCDHGA9Q9Y5G4 U6.59-201ENST00000615686 107 ntBASIC-2.22□□□□□ -2.76
PCDHGA9Q9Y5G4 MIR4748-201ENST00000578076 82 ntBASIC-2.24□□□□□ -2.77
PCDHGA9Q9Y5G4 RNU6-230P-201ENST00000362457 104 ntBASIC-2.26□□□□□ -2.77
PCDHGA9Q9Y5G4 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.26□□□□□ -2.77
PCDHGA9Q9Y5G4 MIR548AL-201ENST00000578416 97 ntBASIC-2.28□□□□□ -2.77
PCDHGA9Q9Y5G4 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.29□□□□□ -2.78
PCDHGA9Q9Y5G4 RNU6-808P-201ENST00000391233 108 ntBASIC-2.3□□□□□ -2.78
PCDHGA9Q9Y5G4 MIR548W-201ENST00000581970 74 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms