Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.93□□□□□ -2.56
SHANK1Q9Y566 RNU6-895P-201ENST00000384125 103 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 RNY3P8-201ENST00000411366 126 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 MIR4426-201ENST00000640330 63 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 RNU6-974P-201ENST00000384099 108 ntBASIC-0.94□□□□□ -2.56
SHANK1Q9Y566 RNU6-361P-201ENST00000364454 107 ntBASIC-0.95□□□□□ -2.56
SHANK1Q9Y566 RNU6-669P-201ENST00000365575 107 ntBASIC-0.95□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.96□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.96□□□□□ -2.56
SHANK1Q9Y566 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.97□□□□□ -2.56
SHANK1Q9Y566 MIR579-201ENST00000385221 98 ntBASIC-0.97□□□□□ -2.56
SHANK1Q9Y566 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
SHANK1Q9Y566 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.97□□□□□ -2.56
SHANK1Q9Y566 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 RNU6-411P-201ENST00000384451 107 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 MIR1302-4-201ENST00000408701 150 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 MIR7978-201ENST00000636158 59 ntBASIC-0.97□□□□□ -2.57
SHANK1Q9Y566 RNU6-912P-201ENST00000363800 104 ntBASIC-0.98□□□□□ -2.57
SHANK1Q9Y566 RNU6-242P-201ENST00000384359 107 ntBASIC-0.98□□□□□ -2.57
SHANK1Q9Y566 SNORA26.2-201ENST00000390922 122 ntBASIC-0.98□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.98□□□□□ -2.57
SHANK1Q9Y566 SNORA25.5-201ENST00000363782 126 ntBASIC-0.98□□□□□ -2.57
SHANK1Q9Y566 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.99□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.99□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.99□□□□□ -2.57
SHANK1Q9Y566 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.99□□□□□ -2.57
SHANK1Q9Y566 RNU7-160P-201ENST00000516660 62 ntBASIC-0.99□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.511-201ENST00000384514 103 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 SNORD116.2-201ENST00000391251 93 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 RNU6-345P-201ENST00000517001 107 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 SNORA40.16-201ENST00000517238 121 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 MIR4679-1-201ENST00000637619 75 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 RNU6-1296P-201ENST00000383879 107 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.397-201ENST00000383950 98 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 RNU6-803P-201ENST00000516034 102 ntBASIC-1□□□□□ -2.57
SHANK1Q9Y566 SNORA25.4-201ENST00000363666 124 ntBASIC-1.01□□□□□ -2.57
SHANK1Q9Y566 RNU6-634P-201ENST00000459134 106 ntBASIC-1.01□□□□□ -2.57
SHANK1Q9Y566 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.01□□□□□ -2.57
SHANK1Q9Y566 U7.4-201ENST00000614961 63 ntBASIC-1.01□□□□□ -2.57
SHANK1Q9Y566 AC013734.1-201ENST00000619329 111 ntBASIC-1.01□□□□□ -2.57
SHANK1Q9Y566 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.02□□□□□ -2.57
SHANK1Q9Y566 MIR202-201ENST00000362219 110 ntBASIC-1.02□□□□□ -2.57
SHANK1Q9Y566 RNU6-598P-201ENST00000364017 105 ntBASIC-1.02□□□□□ -2.57
SHANK1Q9Y566 SNORA40B-201ENST00000385573 128 ntBASIC-1.02□□□□□ -2.57
SHANK1Q9Y566 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.02□□□□□ -2.57
SHANK1Q9Y566 RNU6-987P-201ENST00000384759 104 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 MIR494-201ENST00000349529 81 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 RNU6-530P-201ENST00000391180 107 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 MIR7110-201ENST00000612638 86 ntBASIC-1.03□□□□□ -2.57
SHANK1Q9Y566 RNU6-590P-201ENST00000365039 107 ntBASIC-1.04□□□□□ -2.58
SHANK1Q9Y566 RNA5SP224-201ENST00000365069 126 ntBASIC-1.04□□□□□ -2.58
SHANK1Q9Y566 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.04□□□□□ -2.58
SHANK1Q9Y566 RNU6-172P-201ENST00000411000 93 ntBASIC-1.04□□□□□ -2.58
SHANK1Q9Y566 RNU6-230P-201ENST00000362457 104 ntBASIC-1.05□□□□□ -2.58
SHANK1Q9Y566 SNORA27.2-201ENST00000363365 126 ntBASIC-1.05□□□□□ -2.58
SHANK1Q9Y566 SNORD116-24-201ENST00000384549 92 ntBASIC-1.05□□□□□ -2.58
SHANK1Q9Y566 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.05□□□□□ -2.58
SHANK1Q9Y566 SNORD78.1-201ENST00000390866 65 ntBASIC-1.06□□□□□ -2.58
SHANK1Q9Y566 MIR548H4-201ENST00000408689 111 ntBASIC-1.06□□□□□ -2.58
SHANK1Q9Y566 RNY4P29-201ENST00000410801 97 ntBASIC-1.06□□□□□ -2.58
SHANK1Q9Y566 RNU6-871P-201ENST00000516122 100 ntBASIC-1.06□□□□□ -2.58
SHANK1Q9Y566 RNU6-539P-201ENST00000516665 103 ntBASIC-1.06□□□□□ -2.58
SHANK1Q9Y566 RNU6-300P-201ENST00000459080 104 ntBASIC-1.07□□□□□ -2.58
SHANK1Q9Y566 RNY4P25-201ENST00000459254 96 ntBASIC-1.07□□□□□ -2.58
SHANK1Q9Y566 RNU6-687P-201ENST00000516443 89 ntBASIC-1.07□□□□□ -2.58
SHANK1Q9Y566 RNU6-520P-201ENST00000384717 104 ntBASIC-1.07□□□□□ -2.58
SHANK1Q9Y566 RNU6-800P-201ENST00000384473 103 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 SNORD60-201ENST00000383903 83 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 RNU6-857P-201ENST00000515893 110 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 RNA5SP170-201ENST00000517150 101 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.08□□□□□ -2.58
SHANK1Q9Y566 SNORD73B-201ENST00000364394 72 ntBASIC-1.09□□□□□ -2.58
SHANK1Q9Y566 MIR5693-201ENST00000577722 73 ntBASIC-1.09□□□□□ -2.58
SHANK1Q9Y566 MIR4511-201ENST00000582784 87 ntBASIC-1.09□□□□□ -2.58
SHANK1Q9Y566 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.1□□□□□ -2.58
SHANK1Q9Y566 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.1□□□□□ -2.58
SHANK1Q9Y566 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.1□□□□□ -2.58
SHANK1Q9Y566 RNU7-119P-201ENST00000459279 63 ntBASIC-1.1□□□□□ -2.58
SHANK1Q9Y566 MIR3134-201ENST00000579433 74 ntBASIC-1.1□□□□□ -2.58
SHANK1Q9Y566 RNU6-828P-201ENST00000364876 107 ntBASIC-1.1□□□□□ -2.59
SHANK1Q9Y566 SNORA17.4-201ENST00000391287 132 ntBASIC-1.1□□□□□ -2.59
SHANK1Q9Y566 MIR3938-201ENST00000582157 103 ntBASIC-1.11□□□□□ -2.59
SHANK1Q9Y566 RNU6-822P-201ENST00000362707 106 ntBASIC-1.11□□□□□ -2.59
SHANK1Q9Y566 RNU6-176P-201ENST00000517196 105 ntBASIC-1.11□□□□□ -2.59
SHANK1Q9Y566 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.13□□□□□ -2.59
SHANK1Q9Y566 AL731768.1-201ENST00000603124 139 ntBASIC-1.13□□□□□ -2.59
SHANK1Q9Y566 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.13□□□□□ -2.59
SHANK1Q9Y566 RNU6-810P-201ENST00000364001 107 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms