Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 FTX_4.1-201ENST00000616291 147 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-242P-201ENST00000384359 107 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 MIR581-201ENST00000384895 96 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 RNU6-231P-201ENST00000517122 103 ntBASIC-2.17□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.19□□□□□ -2.76
SHANK3Q9BYB0 RNU6-820P-201ENST00000384273 107 ntBASIC-2.19□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.19□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.2□□□□□ -2.76
SHANK3Q9BYB0 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.21□□□□□ -2.76
SHANK3Q9BYB0 RNU6-44P-201ENST00000384045 107 ntBASIC-2.21□□□□□ -2.76
SHANK3Q9BYB0 RNU6-634P-201ENST00000459134 106 ntBASIC-2.21□□□□□ -2.76
SHANK3Q9BYB0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.21□□□□□ -2.76
SHANK3Q9BYB0 RNY4P9-201ENST00000363194 97 ntBASIC-2.22□□□□□ -2.76
SHANK3Q9BYB0 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.22□□□□□ -2.76
SHANK3Q9BYB0 RNU6-294P-201ENST00000364999 102 ntBASIC-2.23□□□□□ -2.77
SHANK3Q9BYB0 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.23□□□□□ -2.77
SHANK3Q9BYB0 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.23□□□□□ -2.77
SHANK3Q9BYB0 SNORA25.4-201ENST00000363666 124 ntBASIC-2.24□□□□□ -2.77
SHANK3Q9BYB0 RNU6-530P-201ENST00000391180 107 ntBASIC-2.24□□□□□ -2.77
SHANK3Q9BYB0 MT-TR-201ENST00000387439 65 ntBASIC-2.25□□□□□ -2.77
SHANK3Q9BYB0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.25□□□□□ -2.77
SHANK3Q9BYB0 MIR494-201ENST00000349529 81 ntBASIC-2.26□□□□□ -2.77
SHANK3Q9BYB0 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.26□□□□□ -2.77
SHANK3Q9BYB0 AL451105.1-201ENST00000450005 189 ntBASIC-2.26□□□□□ -2.77
SHANK3Q9BYB0 MIR3938-201ENST00000582157 103 ntBASIC-2.27□□□□□ -2.77
SHANK3Q9BYB0 MIR4679-1-201ENST00000637619 75 ntBASIC-2.27□□□□□ -2.77
SHANK3Q9BYB0 RNU6-912P-201ENST00000363800 104 ntBASIC-2.28□□□□□ -2.77
SHANK3Q9BYB0 RNU6-300P-201ENST00000459080 104 ntBASIC-2.28□□□□□ -2.77
SHANK3Q9BYB0 RNU6-122P-201ENST00000516818 107 ntBASIC-2.28□□□□□ -2.77
SHANK3Q9BYB0 MT-TM-201ENST00000387377 68 ntBASIC-2.28□□□□□ -2.78
SHANK3Q9BYB0 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.28□□□□□ -2.78
SHANK3Q9BYB0 RNU6-419P-201ENST00000517030 63 ntBASIC-2.28□□□□□ -2.78
SHANK3Q9BYB0 SNORA40.16-201ENST00000517238 121 ntBASIC-2.29□□□□□ -2.78
SHANK3Q9BYB0 MIR4511-201ENST00000582784 87 ntBASIC-2.29□□□□□ -2.78
SHANK3Q9BYB0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.29□□□□□ -2.78
SHANK3Q9BYB0 MIR4426-201ENST00000640330 63 ntBASIC-2.29□□□□□ -2.78
SHANK3Q9BYB0 RNU6-590P-201ENST00000365039 107 ntBASIC-2.3□□□□□ -2.78
SHANK3Q9BYB0 AC103706.3-201ENST00000636297 85 ntBASIC-2.3□□□□□ -2.78
SHANK3Q9BYB0 RNU6-871P-201ENST00000516122 100 ntBASIC-2.31□□□□□ -2.78
SHANK3Q9BYB0 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.31□□□□□ -2.78
SHANK3Q9BYB0 SNORD30.1-201ENST00000391309 70 ntBASIC-2.31□□□□□ -2.78
SHANK3Q9BYB0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.31□□□□□ -2.78
SHANK3Q9BYB0 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.32□□□□□ -2.78
SHANK3Q9BYB0 RNU6-787P-201ENST00000384032 107 ntBASIC-2.32□□□□□ -2.78
SHANK3Q9BYB0 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.35□□□□□ -2.79
SHANK3Q9BYB0 RNU6-153P-201ENST00000364422 104 ntBASIC-2.36□□□□□ -2.79
SHANK3Q9BYB0 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.36□□□□□ -2.79
SHANK3Q9BYB0 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.36□□□□□ -2.79
SHANK3Q9BYB0 RNU6-539P-201ENST00000516665 103 ntBASIC-2.36□□□□□ -2.79
SHANK3Q9BYB0 RNU6-68P-201ENST00000516576 104 ntBASIC-2.37□□□□□ -2.79
SHANK3Q9BYB0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.37□□□□□ -2.79
SHANK3Q9BYB0 SNORD113-3-201ENST00000364830 72 ntBASIC-2.39□□□□□ -2.79
SHANK3Q9BYB0 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.39□□□□□ -2.79
SHANK3Q9BYB0 RNU6-345P-201ENST00000517001 107 ntBASIC-2.39□□□□□ -2.79
SHANK3Q9BYB0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.39□□□□□ -2.79
SHANK3Q9BYB0 MIR3202-2-201ENST00000635980 79 ntBASIC-2.39□□□□□ -2.79
SHANK3Q9BYB0 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.41□□□□□ -2.8
SHANK3Q9BYB0 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.42□□□□□ -2.8
SHANK3Q9BYB0 MIR5582-201ENST00000579697 68 ntBASIC-2.42□□□□□ -2.8
SHANK3Q9BYB0 MIR548X-201ENST00000580069 75 ntBASIC-2.42□□□□□ -2.8
SHANK3Q9BYB0 RNU6-406P-201ENST00000516470 107 ntBASIC-2.43□□□□□ -2.8
SHANK3Q9BYB0 AL603908.1-201ENST00000406098 201 ntBASIC-2.44□□□□□ -2.8
SHANK3Q9BYB0 AC110620.1-201ENST00000416042 228 ntBASIC-2.44□□□□□ -2.8
SHANK3Q9BYB0 MIR1255A-201ENST00000408338 113 ntBASIC-2.46□□□□□ -2.8
SHANK3Q9BYB0 RNU6-742P-201ENST00000365289 107 ntBASIC-2.47□□□□□ -2.8
SHANK3Q9BYB0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 RNU6-279P-201ENST00000391297 101 ntBASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 RNU6-822P-201ENST00000362707 106 ntBASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 AC062037.1-201ENST00000605302 128 ntBASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 U6.111-201ENST00000636093 83 ntBASIC-2.48□□□□□ -2.81
SHANK3Q9BYB0 MIR4317-201ENST00000637586 65 ntBASIC-2.49□□□□□ -2.81
SHANK3Q9BYB0 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.5□□□□□ -2.81
SHANK3Q9BYB0 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.5□□□□□ -2.81
SHANK3Q9BYB0 RNU6-141P-201ENST00000410499 105 ntBASIC-2.5□□□□□ -2.81
SHANK3Q9BYB0 RNU6-857P-201ENST00000515893 110 ntBASIC-2.5□□□□□ -2.81
SHANK3Q9BYB0 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.51□□□□□ -2.81
SHANK3Q9BYB0 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.51□□□□□ -2.81
SHANK3Q9BYB0 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.52□□□□□ -2.81
SHANK3Q9BYB0 RNU6-471P-201ENST00000383944 106 ntBASIC-2.54□□□□□ -2.82
SHANK3Q9BYB0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
SHANK3Q9BYB0 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.55□□□□□ -2.82
SHANK3Q9BYB0 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.56□□□□□ -2.82
SHANK3Q9BYB0 RNU6-803P-201ENST00000516034 102 ntBASIC-2.56□□□□□ -2.82
SHANK3Q9BYB0 RNU6-800P-201ENST00000384473 103 ntBASIC-2.56□□□□□ -2.82
SHANK3Q9BYB0 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.57□□□□□ -2.82
SHANK3Q9BYB0 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.57□□□□□ -2.82
SHANK3Q9BYB0 MIR4662A-201ENST00000637499 67 ntBASIC-2.57□□□□□ -2.82
SHANK3Q9BYB0 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.59□□□□□ -2.82
SHANK3Q9BYB0 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.59□□□□□ -2.82
SHANK3Q9BYB0 SNORA26.2-201ENST00000390922 122 ntBASIC-2.6□□□□□ -2.83
SHANK3Q9BYB0 RNU6-573P-201ENST00000383938 106 ntBASIC-2.61□□□□□ -2.83
SHANK3Q9BYB0 MIR1254-1-201ENST00000408257 97 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms