Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.94□□□□□ -2.88
LIMD2Q9BT23 RNU6-379P-201ENST00000363813 104 ntBASIC-2.95□□□□□ -2.88
LIMD2Q9BT23 RNU6-380P-201ENST00000410207 107 ntBASIC-2.95□□□□□ -2.88
LIMD2Q9BT23 RNU6-122P-201ENST00000516818 107 ntBASIC-2.95□□□□□ -2.88
LIMD2Q9BT23 MIR548BB-201ENST00000626714 66 ntBASIC-2.95□□□□□ -2.88
LIMD2Q9BT23 RNU6-219P-201ENST00000364728 107 ntBASIC-2.96□□□□□ -2.88
LIMD2Q9BT23 SNORA19-201ENST00000384737 128 ntBASIC-2.96□□□□□ -2.88
LIMD2Q9BT23 SNORD116-22-201ENST00000384430 92 ntBASIC-2.97□□□□□ -2.88
LIMD2Q9BT23 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.98□□□□□ -2.89
LIMD2Q9BT23 MIR2052-201ENST00000636055 55 ntBASIC-2.98□□□□□ -2.89
LIMD2Q9BT23 RNU6-895P-201ENST00000384125 103 ntBASIC-2.99□□□□□ -2.89
LIMD2Q9BT23 RNU6-797P-201ENST00000363101 109 ntBASIC-3□□□□□ -2.89
LIMD2Q9BT23 RNU6-1043P-201ENST00000410355 99 ntBASIC-3□□□□□ -2.89
LIMD2Q9BT23 RNU7-119P-201ENST00000459279 63 ntBASIC-3□□□□□ -2.89
LIMD2Q9BT23 RNU7-200P-201ENST00000516105 62 ntBASIC-3□□□□□ -2.89
LIMD2Q9BT23 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.01□□□□□ -2.89
LIMD2Q9BT23 MIR4317-201ENST00000637586 65 ntBASIC-3.01□□□□□ -2.89
LIMD2Q9BT23 SNORA25.5-201ENST00000363782 126 ntBASIC-3.02□□□□□ -2.89
LIMD2Q9BT23 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.02□□□□□ -2.89
LIMD2Q9BT23 RNU6-411P-201ENST00000384451 107 ntBASIC-3.03□□□□□ -2.89
LIMD2Q9BT23 MIR154-201ENST00000385243 84 ntBASIC-3.03□□□□□ -2.89
LIMD2Q9BT23 MIR4503-201ENST00000582187 83 ntBASIC-3.03□□□□□ -2.89
LIMD2Q9BT23 RNU6-70P-201ENST00000516438 60 ntBASIC-3.04□□□□□ -2.9
LIMD2Q9BT23 RNU4-85P-201ENST00000364675 123 ntBASIC-3.05□□□□□ -2.9
LIMD2Q9BT23 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.05□□□□□ -2.9
LIMD2Q9BT23 RNU6-886P-201ENST00000384319 105 ntBASIC-3.06□□□□□ -2.9
LIMD2Q9BT23 RNU6-776P-201ENST00000364403 104 ntBASIC-3.07□□□□□ -2.9
LIMD2Q9BT23 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.07□□□□□ -2.9
LIMD2Q9BT23 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.07□□□□□ -2.9
LIMD2Q9BT23 RNU6-315P-201ENST00000362666 107 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 RNU6-687P-201ENST00000516443 89 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 MIR3134-201ENST00000579433 74 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 MIR548X-201ENST00000580069 75 ntBASIC-3.08□□□□□ -2.9
LIMD2Q9BT23 SNORD116-14-201ENST00000383894 92 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 SNORD116-17-201ENST00000383929 92 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 SNORD116-15-201ENST00000384445 92 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 SNORD116-19-201ENST00000384729 92 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 RNU6-907P-201ENST00000390924 102 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 RNU6-255P-201ENST00000516957 105 ntBASIC-3.09□□□□□ -2.9
LIMD2Q9BT23 RNY1P5-201ENST00000383890 115 ntBASIC-3.1□□□□□ -2.91
LIMD2Q9BT23 RNU6-979P-201ENST00000383896 107 ntBASIC-3.1□□□□□ -2.91
LIMD2Q9BT23 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.1□□□□□ -2.91
LIMD2Q9BT23 AC006160.2-201ENST00000637708 154 ntBASIC-3.1□□□□□ -2.91
LIMD2Q9BT23 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.11□□□□□ -2.91
LIMD2Q9BT23 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.12□□□□□ -2.91
LIMD2Q9BT23 MIR363-201ENST00000384840 75 ntBASIC-3.13□□□□□ -2.91
LIMD2Q9BT23 MIR3938-201ENST00000582157 103 ntBASIC-3.13□□□□□ -2.91
LIMD2Q9BT23 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.14□□□□□ -2.91
LIMD2Q9BT23 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.14□□□□□ -2.91
LIMD2Q9BT23 RNU6-675P-201ENST00000384236 104 ntBASIC-3.15□□□□□ -2.91
LIMD2Q9BT23 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.15□□□□□ -2.91
LIMD2Q9BT23 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.16□□□□□ -2.92
LIMD2Q9BT23 AL117351.2-201ENST00000513571 157 ntBASIC-3.16□□□□□ -2.92
LIMD2Q9BT23 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.16□□□□□ -2.92
LIMD2Q9BT23 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.18□□□□□ -2.92
LIMD2Q9BT23 RNU6-388P-201ENST00000517012 105 ntBASIC-3.18□□□□□ -2.92
LIMD2Q9BT23 RNU6-389P-201ENST00000517048 105 ntBASIC-3.18□□□□□ -2.92
LIMD2Q9BT23 MALAT1.1-201ENST00000618249 95 ntBASIC-3.18□□□□□ -2.92
LIMD2Q9BT23 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.19□□□□□ -2.92
LIMD2Q9BT23 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.19□□□□□ -2.92
LIMD2Q9BT23 MT-TG-201ENST00000387429 68 ntBASIC-3.19□□□□□ -2.92
LIMD2Q9BT23 RNU6-346P-201ENST00000516288 111 ntBASIC-3.19□□□□□ -2.92
LIMD2Q9BT23 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.2□□□□□ -2.92
LIMD2Q9BT23 MIR548AL-201ENST00000578416 97 ntBASIC-3.2□□□□□ -2.92
LIMD2Q9BT23 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.22□□□□□ -2.92
LIMD2Q9BT23 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.22□□□□□ -2.92
LIMD2Q9BT23 RNU6-327P-201ENST00000516270 127 ntBASIC-3.22□□□□□ -2.92
LIMD2Q9BT23 RNU6-940P-201ENST00000363433 104 ntBASIC-3.23□□□□□ -2.93
LIMD2Q9BT23 RNU6-589P-201ENST00000516485 107 ntBASIC-3.23□□□□□ -2.93
LIMD2Q9BT23 MIR4712-201ENST00000583750 82 ntBASIC-3.23□□□□□ -2.93
LIMD2Q9BT23 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.24□□□□□ -2.93
LIMD2Q9BT23 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.24□□□□□ -2.93
LIMD2Q9BT23 RNU6-209P-201ENST00000384118 107 ntBASIC-3.24□□□□□ -2.93
LIMD2Q9BT23 RNU6-663P-201ENST00000391105 106 ntBASIC-3.24□□□□□ -2.93
LIMD2Q9BT23 SNORA40.13-201ENST00000516379 120 ntBASIC-3.24□□□□□ -2.93
LIMD2Q9BT23 RNU6-463P-201ENST00000384340 107 ntBASIC-3.25□□□□□ -2.93
LIMD2Q9BT23 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.26□□□□□ -2.93
LIMD2Q9BT23 RNU6-446P-201ENST00000362827 106 ntBASIC-3.27□□□□□ -2.93
LIMD2Q9BT23 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.27□□□□□ -2.93
LIMD2Q9BT23 SNORA25.4-201ENST00000363666 124 ntBASIC-3.27□□□□□ -2.93
LIMD2Q9BT23 RNU6-808P-201ENST00000391233 108 ntBASIC-3.27□□□□□ -2.93
LIMD2Q9BT23 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.28□□□□□ -2.93
LIMD2Q9BT23 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.28□□□□□ -2.93
LIMD2Q9BT23 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.28□□□□□ -2.93
LIMD2Q9BT23 AL031737.1-201ENST00000450125 223 ntBASIC-3.29□□□□□ -2.94
LIMD2Q9BT23 MIR4511-201ENST00000582784 87 ntBASIC-3.29□□□□□ -2.94
LIMD2Q9BT23 MIR488-201ENST00000365739 83 ntBASIC-3.3□□□□□ -2.94
LIMD2Q9BT23 RNU6-634P-201ENST00000459134 106 ntBASIC-3.3□□□□□ -2.94
LIMD2Q9BT23 RNU6-844P-201ENST00000517175 102 ntBASIC-3.31□□□□□ -2.94
LIMD2Q9BT23 SNORD113-4-201ENST00000364802 75 ntBASIC-3.32□□□□□ -2.94
LIMD2Q9BT23 RNU6-59P-201ENST00000384787 107 ntBASIC-3.32□□□□□ -2.94
LIMD2Q9BT23 RNU6-916P-201ENST00000516088 109 ntBASIC-3.33□□□□□ -2.94
LIMD2Q9BT23 MIR1245B-201ENST00000636115 69 ntBASIC-3.33□□□□□ -2.94
LIMD2Q9BT23 RNU6-986P-201ENST00000363133 102 ntBASIC-3.34□□□□□ -2.94
LIMD2Q9BT23 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.34□□□□□ -2.94
LIMD2Q9BT23 RNU4-33P-201ENST00000364316 85 ntBASIC-3.34□□□□□ -2.94
LIMD2Q9BT23 MIR5588-201ENST00000581890 63 ntBASIC-3.34□□□□□ -2.94
LIMD2Q9BT23 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.35□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms