Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
RTF1Q92541 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.15□□□□□ -2.59
RTF1Q92541 SNORD45.2-201ENST00000363552 72 ntBASIC-1.15□□□□□ -2.59
RTF1Q92541 RNA5SP93-201ENST00000362525 114 ntBASIC-1.16□□□□□ -2.6
RTF1Q92541 SNORD113-4-201ENST00000364802 75 ntBASIC-1.16□□□□□ -2.6
RTF1Q92541 MIR8485-201ENST00000401372 91 ntBASIC-1.16□□□□□ -2.6
RTF1Q92541 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.17□□□□□ -2.6
RTF1Q92541 AL451105.1-201ENST00000450005 189 ntBASIC-1.17□□□□□ -2.6
RTF1Q92541 RNY4-201ENST00000516507 96 ntBASIC-1.17□□□□□ -2.6
RTF1Q92541 MIR548X-201ENST00000580069 75 ntBASIC-1.17□□□□□ -2.6
RTF1Q92541 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.18□□□□□ -2.6
RTF1Q92541 RNU6-164P-201ENST00000364604 103 ntBASIC-1.2□□□□□ -2.6
RTF1Q92541 HLA-S-202ENST00000425174 53 ntBASIC-1.2□□□□□ -2.6
RTF1Q92541 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.21□□□□□ -2.6
RTF1Q92541 RNU6-576P-201ENST00000390854 102 ntBASIC-1.21□□□□□ -2.6
RTF1Q92541 AC091912.2-201ENST00000624798 167 ntBASIC-1.23□□□□□ -2.61
RTF1Q92541 MIR6874-201ENST00000635894 71 ntBASIC-1.23□□□□□ -2.61
RTF1Q92541 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.24□□□□□ -2.61
RTF1Q92541 AC018880.2-201ENST00000414265 201 ntBASIC-1.25□□□□□ -2.61
RTF1Q92541 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.26□□□□□ -2.61
RTF1Q92541 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.28□□□□□ -2.61
RTF1Q92541 RNU6-118P-201ENST00000516552 102 ntBASIC-1.29□□□□□ -2.62
RTF1Q92541 RNU6-983P-201ENST00000516004 103 ntBASIC-1.3□□□□□ -2.62
RTF1Q92541 SNORD54-201ENST00000459159 67 ntBASIC-1.31□□□□□ -2.62
RTF1Q92541 MIR6502-201ENST00000617296 76 ntBASIC-1.31□□□□□ -2.62
RTF1Q92541 RNU6-614P-201ENST00000384369 107 ntBASIC-1.32□□□□□ -2.62
RTF1Q92541 RNU6-530P-201ENST00000391180 107 ntBASIC-1.32□□□□□ -2.62
RTF1Q92541 RNU6-980P-201ENST00000516925 103 ntBASIC-1.32□□□□□ -2.62
RTF1Q92541 U6.59-201ENST00000615686 107 ntBASIC-1.32□□□□□ -2.62
RTF1Q92541 MIR5591-201ENST00000578248 65 ntBASIC-1.33□□□□□ -2.62
RTF1Q92541 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 RNU4-33P-201ENST00000364316 85 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 RNY3P8-201ENST00000411366 126 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 AC120024.2-201ENST00000576526 175 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 AC138207.3-201ENST00000585289 166 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.34□□□□□ -2.62
RTF1Q92541 RNU6-79P-201ENST00000362511 107 ntBASIC-1.35□□□□□ -2.63
RTF1Q92541 MIR4520-1-201ENST00000582609 70 ntBASIC-1.35□□□□□ -2.63
RTF1Q92541 RNU6-361P-201ENST00000364454 107 ntBASIC-1.36□□□□□ -2.63
RTF1Q92541 SNORD60-201ENST00000383903 83 ntBASIC-1.4□□□□□ -2.63
RTF1Q92541 MIR202-201ENST00000362219 110 ntBASIC-1.42□□□□□ -2.64
RTF1Q92541 RNU6-563P-201ENST00000364872 108 ntBASIC-1.42□□□□□ -2.64
RTF1Q92541 MTND4LP19-201ENST00000403051 166 ntBASIC-1.42□□□□□ -2.64
RTF1Q92541 MIR4770-201ENST00000579149 58 ntBASIC-1.42□□□□□ -2.64
RTF1Q92541 RNU6-400P-201ENST00000391173 106 ntBASIC-1.43□□□□□ -2.64
RTF1Q92541 SNORA17.4-201ENST00000391287 132 ntBASIC-1.43□□□□□ -2.64
RTF1Q92541 AC013734.1-201ENST00000619329 111 ntBASIC-1.44□□□□□ -2.64
RTF1Q92541 MIR4426-201ENST00000640330 63 ntBASIC-1.45□□□□□ -2.64
RTF1Q92541 RNU6-936P-201ENST00000384005 107 ntBASIC-1.46□□□□□ -2.64
RTF1Q92541 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.46□□□□□ -2.64
RTF1Q92541 RNU6-808P-201ENST00000391233 108 ntBASIC-1.47□□□□□ -2.64
RTF1Q92541 MIR548N-201ENST00000408742 75 ntBASIC-1.48□□□□□ -2.65
RTF1Q92541 RNA5SP86-201ENST00000390869 98 ntBASIC-1.49□□□□□ -2.65
RTF1Q92541 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.5□□□□□ -2.65
RTF1Q92541 RNU6-176P-201ENST00000517196 105 ntBASIC-1.5□□□□□ -2.65
RTF1Q92541 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.51□□□□□ -2.65
RTF1Q92541 RNU6-742P-201ENST00000365289 107 ntBASIC-1.52□□□□□ -2.65
RTF1Q92541 MIR548H1-201ENST00000408610 102 ntBASIC-1.52□□□□□ -2.65
RTF1Q92541 SNORD18.1-201ENST00000363807 70 ntBASIC-1.54□□□□□ -2.66
RTF1Q92541 RNU6-300P-201ENST00000459080 104 ntBASIC-1.54□□□□□ -2.66
RTF1Q92541 SNORD18C-201ENST00000362704 69 ntBASIC-1.55□□□□□ -2.66
RTF1Q92541 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.55□□□□□ -2.66
RTF1Q92541 MIR487B-201ENST00000385021 84 ntBASIC-1.55□□□□□ -2.66
RTF1Q92541 RNU6-695P-201ENST00000391157 104 ntBASIC-1.55□□□□□ -2.66
RTF1Q92541 U6.97-201ENST00000636904 101 ntBASIC-1.55□□□□□ -2.66
RTF1Q92541 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.56□□□□□ -2.66
RTF1Q92541 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.57□□□□□ -2.66
RTF1Q92541 RNU6-753P-201ENST00000363926 107 ntBASIC-1.57□□□□□ -2.66
RTF1Q92541 MIR548AL-201ENST00000578416 97 ntBASIC-1.57□□□□□ -2.66
RTF1Q92541 RNU6-838P-201ENST00000363399 108 ntBASIC-1.59□□□□□ -2.66
RTF1Q92541 MIR3139-201ENST00000579145 76 ntBASIC-1.6□□□□□ -2.67
RTF1Q92541 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.61□□□□□ -2.67
RTF1Q92541 MIR3123-201ENST00000583417 75 ntBASIC-1.61□□□□□ -2.67
RTF1Q92541 MIR581-201ENST00000384895 96 ntBASIC-1.62□□□□□ -2.67
RTF1Q92541 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.63□□□□□ -2.67
RTF1Q92541 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.66□□□□□ -2.68
RTF1Q92541 MT-TM-201ENST00000387377 68 ntBASIC-1.66□□□□□ -2.68
RTF1Q92541 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.67□□□□□ -2.68
RTF1Q92541 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.67□□□□□ -2.68
RTF1Q92541 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.67□□□□□ -2.68
RTF1Q92541 RNU6-841P-201ENST00000383872 107 ntBASIC-1.68□□□□□ -2.68
RTF1Q92541 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.68□□□□□ -2.68
RTF1Q92541 MIR548AM-201ENST00000584298 74 ntBASIC-1.68□□□□□ -2.68
RTF1Q92541 RNU6-987P-201ENST00000384759 104 ntBASIC-1.69□□□□□ -2.68
RTF1Q92541 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.69□□□□□ -2.68
RTF1Q92541 MIR379-201ENST00000362218 67 ntBASIC-1.7□□□□□ -2.68
RTF1Q92541 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.7□□□□□ -2.68
RTF1Q92541 RNU4-37P-201ENST00000410214 84 ntBASIC-1.7□□□□□ -2.68
RTF1Q92541 AC108019.1-201ENST00000512540 175 ntBASIC-1.7□□□□□ -2.68
RTF1Q92541 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.71□□□□□ -2.68
RTF1Q92541 MIR4317-201ENST00000637586 65 ntBASIC-1.71□□□□□ -2.68
RTF1Q92541 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.72□□□□□ -2.68
RTF1Q92541 RNU6-930P-201ENST00000390938 100 ntBASIC-1.72□□□□□ -2.68
RTF1Q92541 RNU6-141P-201ENST00000410499 105 ntBASIC-1.72□□□□□ -2.68
RTF1Q92541 MIR4756-201ENST00000577874 78 ntBASIC-1.73□□□□□ -2.69
RTF1Q92541 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.74□□□□□ -2.69
RTF1Q92541 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.74□□□□□ -2.69
RTF1Q92541 MIR548W-201ENST00000581970 74 ntBASIC-1.75□□□□□ -2.69
RTF1Q92541 RNU4-88P-201ENST00000411220 86 ntBASIC-1.76□□□□□ -2.69
RTF1Q92541 snoU13.10-201ENST00000459301 103 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms