Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 MIR3134-201ENST00000579433 74 ntBASIC-3.52□□□□□ -2.97
SSX9Q7RTT3 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.52□□□□□ -2.97
SSX9Q7RTT3 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.53□□□□□ -2.97
SSX9Q7RTT3 SNORA17.4-201ENST00000391287 132 ntBASIC-3.54□□□□□ -2.98
SSX9Q7RTT3 RNU6-687P-201ENST00000516443 89 ntBASIC-3.55□□□□□ -2.98
SSX9Q7RTT3 RNU6-49P-201ENST00000384256 107 ntBASIC-3.56□□□□□ -2.98
SSX9Q7RTT3 MIR548M-201ENST00000408260 86 ntBASIC-3.56□□□□□ -2.98
SSX9Q7RTT3 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.56□□□□□ -2.98
SSX9Q7RTT3 RNU6-803P-201ENST00000516034 102 ntBASIC-3.57□□□□□ -2.98
SSX9Q7RTT3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.57□□□□□ -2.98
SSX9Q7RTT3 RNU6-912P-201ENST00000363800 104 ntBASIC-3.59□□□□□ -2.98
SSX9Q7RTT3 MIR5693-201ENST00000577722 73 ntBASIC-3.59□□□□□ -2.98
SSX9Q7RTT3 RNU6-361P-201ENST00000364454 107 ntBASIC-3.6□□□□□ -2.99
SSX9Q7RTT3 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.6□□□□□ -2.99
SSX9Q7RTT3 MIR379-201ENST00000362218 67 ntBASIC-3.61□□□□□ -2.99
SSX9Q7RTT3 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.61□□□□□ -2.99
SSX9Q7RTT3 MIR3668-201ENST00000582138 75 ntBASIC-3.61□□□□□ -2.99
SSX9Q7RTT3 RNU6-530P-201ENST00000391180 107 ntBASIC-3.62□□□□□ -2.99
SSX9Q7RTT3 RNY4P25-201ENST00000459254 96 ntBASIC-3.62□□□□□ -2.99
SSX9Q7RTT3 SNORA40B-201ENST00000385573 128 ntBASIC-3.63□□□□□ -2.99
SSX9Q7RTT3 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.64□□□□□ -2.99
SSX9Q7RTT3 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.65□□□□□ -2.99
SSX9Q7RTT3 AL731768.1-201ENST00000603124 139 ntBASIC-3.65□□□□□ -2.99
SSX9Q7RTT3 RNU6-242P-201ENST00000384359 107 ntBASIC-3.66□□□□□ -3
SSX9Q7RTT3 RNU6-411P-201ENST00000384451 107 ntBASIC-3.66□□□□□ -3
SSX9Q7RTT3 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.66□□□□□ -3
SSX9Q7RTT3 RNU6-68P-201ENST00000516576 104 ntBASIC-3.66□□□□□ -3
SSX9Q7RTT3 SNORD45.2-201ENST00000363552 72 ntBASIC-3.68□□□□□ -3
SSX9Q7RTT3 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.69□□□□□ -3
SSX9Q7RTT3 MIR494-201ENST00000349529 81 ntBASIC-3.7□□□□□ -3
SSX9Q7RTT3 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.7□□□□□ -3
SSX9Q7RTT3 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.7□□□□□ -3
SSX9Q7RTT3 SNORA25.5-201ENST00000363782 126 ntBASIC-3.71□□□□□ -3
SSX9Q7RTT3 MIR3910-1-201ENST00000580936 111 ntBASIC-3.71□□□□□ -3
SSX9Q7RTT3 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.72□□□□□ -3
SSX9Q7RTT3 RNU6-919P-201ENST00000516731 104 ntBASIC-3.72□□□□□ -3
SSX9Q7RTT3 RNU6-122P-201ENST00000516818 107 ntBASIC-3.72□□□□□ -3
SSX9Q7RTT3 MIR4426-201ENST00000640330 63 ntBASIC-3.72□□□□□ -3
SSX9Q7RTT3 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.73□□□□□ -3.01
SSX9Q7RTT3 RNU6-663P-201ENST00000391105 106 ntBASIC-3.73□□□□□ -3.01
SSX9Q7RTT3 MIR1254-1-201ENST00000408257 97 ntBASIC-3.73□□□□□ -3.01
SSX9Q7RTT3 RNU7-119P-201ENST00000459279 63 ntBASIC-3.73□□□□□ -3.01
SSX9Q7RTT3 SNORA40.16-201ENST00000517238 121 ntBASIC-3.73□□□□□ -3.01
SSX9Q7RTT3 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.74□□□□□ -3.01
SSX9Q7RTT3 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 RNU6-215P-201ENST00000365169 102 ntBASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 SNORD20-201ENST00000384550 80 ntBASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 RNA5SP89-201ENST00000410300 108 ntBASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 MIR4666B-201ENST00000578142 81 ntBASIC-3.75□□□□□ -3.01
SSX9Q7RTT3 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 MT-TR-201ENST00000387439 65 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 RNY4P30-201ENST00000410216 95 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 AL451105.1-201ENST00000450005 189 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 RNU6-634P-201ENST00000459134 106 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 MIR3671-201ENST00000580455 88 ntBASIC-3.76□□□□□ -3.01
SSX9Q7RTT3 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.77□□□□□ -3.01
SSX9Q7RTT3 U7.4-201ENST00000614961 63 ntBASIC-3.77□□□□□ -3.01
SSX9Q7RTT3 RNU6-300P-201ENST00000459080 104 ntBASIC-3.79□□□□□ -3.02
SSX9Q7RTT3 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.8□□□□□ -3.02
SSX9Q7RTT3 MIR450A2-201ENST00000385022 100 ntBASIC-3.8□□□□□ -3.02
SSX9Q7RTT3 RNU6-800P-201ENST00000384473 103 ntBASIC-3.81□□□□□ -3.02
SSX9Q7RTT3 RNU6-345P-201ENST00000517001 107 ntBASIC-3.81□□□□□ -3.02
SSX9Q7RTT3 SNORA25.4-201ENST00000363666 124 ntBASIC-3.82□□□□□ -3.02
SSX9Q7RTT3 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.82□□□□□ -3.02
SSX9Q7RTT3 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.82□□□□□ -3.02
SSX9Q7RTT3 RNU6-590P-201ENST00000365039 107 ntBASIC-3.83□□□□□ -3.02
SSX9Q7RTT3 RNU6-176P-201ENST00000517196 105 ntBASIC-3.83□□□□□ -3.02
SSX9Q7RTT3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.83□□□□□ -3.02
SSX9Q7RTT3 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.84□□□□□ -3.02
SSX9Q7RTT3 SNORD113-1-201ENST00000365321 69 ntBASIC-3.84□□□□□ -3.02
SSX9Q7RTT3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.84□□□□□ -3.02
SSX9Q7RTT3 SNORD30.1-201ENST00000391309 70 ntBASIC-3.86□□□□□ -3.03
SSX9Q7RTT3 RNU6-44P-201ENST00000384045 107 ntBASIC-3.87□□□□□ -3.03
SSX9Q7RTT3 AL606753.1-201ENST00000427435 87 ntBASIC-3.88□□□□□ -3.03
SSX9Q7RTT3 RNU6-787P-201ENST00000384032 107 ntBASIC-3.89□□□□□ -3.03
SSX9Q7RTT3 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.89□□□□□ -3.03
SSX9Q7RTT3 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.89□□□□□ -3.03
SSX9Q7RTT3 AL359920.1-201ENST00000618332 176 ntBASIC-3.9□□□□□ -3.03
SSX9Q7RTT3 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.91□□□□□ -3.04
SSX9Q7RTT3 RNU6-940P-201ENST00000363433 104 ntBASIC-3.93□□□□□ -3.04
SSX9Q7RTT3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.93□□□□□ -3.04
SSX9Q7RTT3 RNU6-294P-201ENST00000364999 102 ntBASIC-3.94□□□□□ -3.04
SSX9Q7RTT3 MIR509-1-201ENST00000385265 94 ntBASIC-3.94□□□□□ -3.04
SSX9Q7RTT3 MIR509-2-201ENST00000390724 91 ntBASIC-3.94□□□□□ -3.04
SSX9Q7RTT3 SNORD114-13-201ENST00000364377 74 ntBASIC-3.95□□□□□ -3.04
SSX9Q7RTT3 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.96□□□□□ -3.04
SSX9Q7RTT3 RNU6-419P-201ENST00000517030 63 ntBASIC-3.97□□□□□ -3.04
SSX9Q7RTT3 MIR4511-201ENST00000582784 87 ntBASIC-3.98□□□□□ -3.05
SSX9Q7RTT3 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.99□□□□□ -3.05
SSX9Q7RTT3 MIR3938-201ENST00000582157 103 ntBASIC-3.99□□□□□ -3.05
SSX9Q7RTT3 RNU6-1169P-201ENST00000363537 103 ntBASIC-4□□□□□ -3.05
SSX9Q7RTT3 RNU6-820P-201ENST00000384273 107 ntBASIC-4.01□□□□□ -3.05
SSX9Q7RTT3 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.01□□□□□ -3.05
SSX9Q7RTT3 RNU6-871P-201ENST00000516122 100 ntBASIC-4.01□□□□□ -3.05
SSX9Q7RTT3 RNU6-742P-201ENST00000365289 107 ntBASIC-4.02□□□□□ -3.05
SSX9Q7RTT3 AC103706.3-201ENST00000636297 85 ntBASIC-4.02□□□□□ -3.05
SSX9Q7RTT3 RNU6-987P-201ENST00000384759 104 ntBASIC-4.04□□□□□ -3.06
SSX9Q7RTT3 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.05□□□□□ -3.06
SSX9Q7RTT3 RNU6-737P-201ENST00000365370 107 ntBASIC-4.06□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 1127.6 ms