Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.89□□□□□ -2.55
CCBE1Q6UXH8 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.9□□□□□ -2.55
CCBE1Q6UXH8 RNU6-974P-201ENST00000384099 108 ntBASIC-0.9□□□□□ -2.55
CCBE1Q6UXH8 SNORA40B-201ENST00000385573 128 ntBASIC-0.9□□□□□ -2.55
CCBE1Q6UXH8 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.91□□□□□ -2.56
CCBE1Q6UXH8 SNORA40.16-201ENST00000517238 121 ntBASIC-0.91□□□□□ -2.56
CCBE1Q6UXH8 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.92□□□□□ -2.56
CCBE1Q6UXH8 SNORA27.2-201ENST00000363365 126 ntBASIC-0.94□□□□□ -2.56
CCBE1Q6UXH8 RNU6-828P-201ENST00000364876 107 ntBASIC-0.94□□□□□ -2.56
CCBE1Q6UXH8 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.94□□□□□ -2.56
CCBE1Q6UXH8 RNU6-520P-201ENST00000384717 104 ntBASIC-0.94□□□□□ -2.56
CCBE1Q6UXH8 AC018880.2-201ENST00000414265 201 ntBASIC-0.94□□□□□ -2.56
CCBE1Q6UXH8 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.95□□□□□ -2.56
CCBE1Q6UXH8 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.95□□□□□ -2.56
CCBE1Q6UXH8 MIR23C-201ENST00000579846 100 ntBASIC-0.95□□□□□ -2.56
CCBE1Q6UXH8 SNORD18.1-201ENST00000363807 70 ntBASIC-0.96□□□□□ -2.56
CCBE1Q6UXH8 MIR6502-201ENST00000617296 76 ntBASIC-0.96□□□□□ -2.56
CCBE1Q6UXH8 RNU6-590P-201ENST00000365039 107 ntBASIC-0.97□□□□□ -2.56
CCBE1Q6UXH8 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.97□□□□□ -2.56
CCBE1Q6UXH8 AC125388.1-201ENST00000459631 156 ntBASIC-0.97□□□□□ -2.56
CCBE1Q6UXH8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
CCBE1Q6UXH8 AC120024.2-201ENST00000576526 175 ntBASIC-0.99□□□□□ -2.57
CCBE1Q6UXH8 MIR3139-201ENST00000579145 76 ntBASIC-0.99□□□□□ -2.57
CCBE1Q6UXH8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1□□□□□ -2.57
CCBE1Q6UXH8 RNU6-400P-201ENST00000391173 106 ntBASIC-1.01□□□□□ -2.57
CCBE1Q6UXH8 MIR548H1-201ENST00000408610 102 ntBASIC-1.01□□□□□ -2.57
CCBE1Q6UXH8 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.01□□□□□ -2.57
CCBE1Q6UXH8 RNU6-79P-201ENST00000362511 107 ntBASIC-1.02□□□□□ -2.57
CCBE1Q6UXH8 RNU6-563P-201ENST00000364872 108 ntBASIC-1.02□□□□□ -2.57
CCBE1Q6UXH8 RNY3P8-201ENST00000411366 126 ntBASIC-1.02□□□□□ -2.57
CCBE1Q6UXH8 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.02□□□□□ -2.57
CCBE1Q6UXH8 RNU6-446P-201ENST00000362827 106 ntBASIC-1.03□□□□□ -2.57
CCBE1Q6UXH8 MIR487B-201ENST00000385021 84 ntBASIC-1.03□□□□□ -2.57
CCBE1Q6UXH8 MT-TM-201ENST00000387377 68 ntBASIC-1.03□□□□□ -2.57
CCBE1Q6UXH8 RNA5SP86-201ENST00000390869 98 ntBASIC-1.03□□□□□ -2.57
CCBE1Q6UXH8 AC139453.2-201ENST00000487255 133 ntBASIC-1.04□□□□□ -2.58
CCBE1Q6UXH8 MIR633-201ENST00000384821 98 ntBASIC-1.05□□□□□ -2.58
CCBE1Q6UXH8 AC013734.1-201ENST00000619329 111 ntBASIC-1.05□□□□□ -2.58
CCBE1Q6UXH8 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.06□□□□□ -2.58
CCBE1Q6UXH8 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.07□□□□□ -2.58
CCBE1Q6UXH8 SNORD45.2-201ENST00000363552 72 ntBASIC-1.07□□□□□ -2.58
CCBE1Q6UXH8 RNU6-530P-201ENST00000391180 107 ntBASIC-1.07□□□□□ -2.58
CCBE1Q6UXH8 AL451105.1-201ENST00000450005 189 ntBASIC-1.07□□□□□ -2.58
CCBE1Q6UXH8 RNU6-419P-201ENST00000517030 63 ntBASIC-1.07□□□□□ -2.58
CCBE1Q6UXH8 RNU6-695P-201ENST00000391157 104 ntBASIC-1.08□□□□□ -2.58
CCBE1Q6UXH8 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.08□□□□□ -2.58
CCBE1Q6UXH8 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.08□□□□□ -2.58
CCBE1Q6UXH8 U6.97-201ENST00000636904 101 ntBASIC-1.08□□□□□ -2.58
CCBE1Q6UXH8 RNU6-829P-201ENST00000363700 112 ntBASIC-1.09□□□□□ -2.58
CCBE1Q6UXH8 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.09□□□□□ -2.58
CCBE1Q6UXH8 MIR202-201ENST00000362219 110 ntBASIC-1.1□□□□□ -2.59
CCBE1Q6UXH8 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.11□□□□□ -2.59
CCBE1Q6UXH8 SNORD113-4-201ENST00000364802 75 ntBASIC-1.12□□□□□ -2.59
CCBE1Q6UXH8 MIR548X-201ENST00000580069 75 ntBASIC-1.12□□□□□ -2.59
CCBE1Q6UXH8 MIR3123-201ENST00000583417 75 ntBASIC-1.12□□□□□ -2.59
CCBE1Q6UXH8 MIR664B-201ENST00000626756 61 ntBASIC-1.12□□□□□ -2.59
CCBE1Q6UXH8 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.13□□□□□ -2.59
CCBE1Q6UXH8 RNU6-361P-201ENST00000364454 107 ntBASIC-1.14□□□□□ -2.59
CCBE1Q6UXH8 SNORD60-201ENST00000383903 83 ntBASIC-1.14□□□□□ -2.59
CCBE1Q6UXH8 SNORA17.4-201ENST00000391287 132 ntBASIC-1.14□□□□□ -2.59
CCBE1Q6UXH8 AC108019.1-201ENST00000512540 175 ntBASIC-1.14□□□□□ -2.59
CCBE1Q6UXH8 RNU6-803P-201ENST00000516034 102 ntBASIC-1.14□□□□□ -2.59
CCBE1Q6UXH8 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.16□□□□□ -2.6
CCBE1Q6UXH8 RNU6-841P-201ENST00000383872 107 ntBASIC-1.16□□□□□ -2.6
CCBE1Q6UXH8 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.16□□□□□ -2.6
CCBE1Q6UXH8 AC079150.2-201ENST00000443733 78 ntBASIC-1.16□□□□□ -2.6
CCBE1Q6UXH8 MIR548AM-201ENST00000584298 74 ntBASIC-1.17□□□□□ -2.6
CCBE1Q6UXH8 RNU6-499P-201ENST00000365615 107 ntBASIC-1.18□□□□□ -2.6
CCBE1Q6UXH8 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.18□□□□□ -2.6
CCBE1Q6UXH8 MIR4756-201ENST00000577874 78 ntBASIC-1.18□□□□□ -2.6
CCBE1Q6UXH8 MIR4426-201ENST00000640330 63 ntBASIC-1.18□□□□□ -2.6
CCBE1Q6UXH8 RNA5SP405-201ENST00000363059 114 ntBASIC-1.19□□□□□ -2.6
CCBE1Q6UXH8 MIR581-201ENST00000384895 96 ntBASIC-1.19□□□□□ -2.6
CCBE1Q6UXH8 MIR548N-201ENST00000408742 75 ntBASIC-1.19□□□□□ -2.6
CCBE1Q6UXH8 RNU6-788P-201ENST00000390967 104 ntBASIC-1.2□□□□□ -2.6
CCBE1Q6UXH8 RNU6-742P-201ENST00000365289 107 ntBASIC-1.21□□□□□ -2.6
CCBE1Q6UXH8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.21□□□□□ -2.6
CCBE1Q6UXH8 SNORD18C-201ENST00000362704 69 ntBASIC-1.22□□□□□ -2.6
CCBE1Q6UXH8 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.22□□□□□ -2.6
CCBE1Q6UXH8 RNU4-88P-201ENST00000411220 86 ntBASIC-1.22□□□□□ -2.6
CCBE1Q6UXH8 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.22□□□□□ -2.6
CCBE1Q6UXH8 RNU4-33P-201ENST00000364316 85 ntBASIC-1.23□□□□□ -2.61
CCBE1Q6UXH8 RNU6-300P-201ENST00000459080 104 ntBASIC-1.23□□□□□ -2.61
CCBE1Q6UXH8 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.23□□□□□ -2.61
CCBE1Q6UXH8 snoU13.10-201ENST00000459301 103 ntBASIC-1.24□□□□□ -2.61
CCBE1Q6UXH8 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.24□□□□□ -2.61
CCBE1Q6UXH8 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.24□□□□□ -2.61
CCBE1Q6UXH8 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.25□□□□□ -2.61
CCBE1Q6UXH8 MIR548W-201ENST00000581970 74 ntBASIC-1.26□□□□□ -2.61
CCBE1Q6UXH8 RNU6-194P-201ENST00000363862 105 ntBASIC-1.27□□□□□ -2.61
CCBE1Q6UXH8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.27□□□□□ -2.61
CCBE1Q6UXH8 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.27□□□□□ -2.61
CCBE1Q6UXH8 RNU6-176P-201ENST00000517196 105 ntBASIC-1.27□□□□□ -2.61
CCBE1Q6UXH8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
CCBE1Q6UXH8 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.3□□□□□ -2.62
CCBE1Q6UXH8 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.33□□□□□ -2.62
CCBE1Q6UXH8 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.33□□□□□ -2.62
CCBE1Q6UXH8 RNU6-614P-201ENST00000384369 107 ntBASIC-1.34□□□□□ -2.62
CCBE1Q6UXH8 U6.59-201ENST00000615686 107 ntBASIC-1.34□□□□□ -2.62
CCBE1Q6UXH8 MIR379-201ENST00000362218 67 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms