Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.56□□□□□ -2.66
RPUSD3Q6P087 RNU6-300P-201ENST00000459080 104 ntBASIC-1.56□□□□□ -2.66
RPUSD3Q6P087 RNU6-122P-201ENST00000516818 107 ntBASIC-1.56□□□□□ -2.66
RPUSD3Q6P087 RNU6-844P-201ENST00000517175 102 ntBASIC-1.56□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.57□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.57□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.57□□□□□ -2.66
RPUSD3Q6P087 MIR1207-201ENST00000408249 87 ntBASIC-1.57□□□□□ -2.66
RPUSD3Q6P087 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 RNU6-411P-201ENST00000384451 107 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 RNU6-70P-201ENST00000516438 60 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 RNU6-419P-201ENST00000517030 63 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 MIR5588-201ENST00000581890 63 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 AL365222.1-201ENST00000614661 98 ntBASIC-1.58□□□□□ -2.66
RPUSD3Q6P087 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.59□□□□□ -2.66
RPUSD3Q6P087 MIR154-201ENST00000385243 84 ntBASIC-1.59□□□□□ -2.66
RPUSD3Q6P087 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 RNU6-787P-201ENST00000384032 107 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 MIR548M-201ENST00000408260 86 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 RNU6-345P-201ENST00000517001 107 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 AL359920.1-201ENST00000618332 176 ntBASIC-1.6□□□□□ -2.67
RPUSD3Q6P087 SNORA25.5-201ENST00000363782 126 ntBASIC-1.61□□□□□ -2.67
RPUSD3Q6P087 RNU6-49P-201ENST00000384256 107 ntBASIC-1.61□□□□□ -2.67
RPUSD3Q6P087 SNORD115-45-201ENST00000391078 81 ntBASIC-1.61□□□□□ -2.67
RPUSD3Q6P087 MIR548H4-201ENST00000408689 111 ntBASIC-1.61□□□□□ -2.67
RPUSD3Q6P087 RNY4P25-201ENST00000459254 96 ntBASIC-1.61□□□□□ -2.67
RPUSD3Q6P087 RNU7-171P-201ENST00000459581 62 ntBASIC-1.62□□□□□ -2.67
RPUSD3Q6P087 MIR1245B-201ENST00000636115 69 ntBASIC-1.62□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 SNORD114-13-201ENST00000364377 74 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 RNA5SP224-201ENST00000365069 126 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 RNU6-895P-201ENST00000384125 103 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 SNORA40.13-201ENST00000516379 120 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 MIR548AH-201ENST00000637109 76 ntBASIC-1.63□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.64□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.64□□□□□ -2.67
RPUSD3Q6P087 MIR124-1-201ENST00000385275 85 ntBASIC-1.64□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.64□□□□□ -2.67
RPUSD3Q6P087 AL031737.1-201ENST00000450125 223 ntBASIC-1.65□□□□□ -2.67
RPUSD3Q6P087 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.65□□□□□ -2.67
RPUSD3Q6P087 RNU6-22P-201ENST00000384355 107 ntBASIC-1.66□□□□□ -2.68
RPUSD3Q6P087 RNU6-634P-201ENST00000459134 106 ntBASIC-1.66□□□□□ -2.68
RPUSD3Q6P087 RNU6-176P-201ENST00000517196 105 ntBASIC-1.66□□□□□ -2.68
RPUSD3Q6P087 RNU6-737P-201ENST00000365370 107 ntBASIC-1.67□□□□□ -2.68
RPUSD3Q6P087 RNU6-803P-201ENST00000516034 102 ntBASIC-1.67□□□□□ -2.68
RPUSD3Q6P087 RNU6-788P-201ENST00000390967 104 ntBASIC-1.68□□□□□ -2.68
RPUSD3Q6P087 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.68□□□□□ -2.68
RPUSD3Q6P087 RNU6-313P-201ENST00000516317 112 ntBASIC-1.68□□□□□ -2.68
RPUSD3Q6P087 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.69□□□□□ -2.68
RPUSD3Q6P087 RNU6-663P-201ENST00000391105 106 ntBASIC-1.69□□□□□ -2.68
RPUSD3Q6P087 RNU6-380P-201ENST00000410207 107 ntBASIC-1.69□□□□□ -2.68
RPUSD3Q6P087 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.69□□□□□ -2.68
RPUSD3Q6P087 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.69□□□□□ -2.68
RPUSD3Q6P087 RNU6-446P-201ENST00000362827 106 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 SNORA25.4-201ENST00000363666 124 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 RNU6-147P-201ENST00000383983 107 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 MIR656-201ENST00000385224 78 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 RNU7-119P-201ENST00000459279 63 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 AC139453.2-201ENST00000487255 133 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 MIR4666B-201ENST00000578142 81 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 MIR4511-201ENST00000582784 87 ntBASIC-1.7□□□□□ -2.68
RPUSD3Q6P087 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.71□□□□□ -2.68
RPUSD3Q6P087 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.71□□□□□ -2.68
RPUSD3Q6P087 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.71□□□□□ -2.68
RPUSD3Q6P087 MIR3938-201ENST00000582157 103 ntBASIC-1.71□□□□□ -2.68
RPUSD3Q6P087 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.71□□□□□ -2.68
RPUSD3Q6P087 SNORD45.2-201ENST00000363552 72 ntBASIC-1.72□□□□□ -2.68
RPUSD3Q6P087 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.72□□□□□ -2.68
RPUSD3Q6P087 SNORD45C-201ENST00000383893 79 ntBASIC-1.72□□□□□ -2.68
RPUSD3Q6P087 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.72□□□□□ -2.68
RPUSD3Q6P087 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.73□□□□□ -2.69
RPUSD3Q6P087 MIR548X-201ENST00000580069 75 ntBASIC-1.73□□□□□ -2.69
RPUSD3Q6P087 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.74□□□□□ -2.69
RPUSD3Q6P087 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.74□□□□□ -2.69
RPUSD3Q6P087 SNORD113-4-201ENST00000364802 75 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 RNU6-32P-201ENST00000383948 107 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 RNU6-13P-201ENST00000384248 107 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 RNU6-12P-201ENST00000384604 107 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 RNU6-41P-201ENST00000384741 107 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 MIR545-201ENST00000385085 106 ntBASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.75□□□□□ -2.69
RPUSD3Q6P087 RNY4P7-201ENST00000364600 96 ntBASIC-1.76□□□□□ -2.69
RPUSD3Q6P087 AC110620.1-201ENST00000416042 228 ntBASIC-1.76□□□□□ -2.69
RPUSD3Q6P087 RNY4-201ENST00000516507 96 ntBASIC-1.76□□□□□ -2.69
RPUSD3Q6P087 RNA5SP106-201ENST00000517274 100 ntBASIC-1.76□□□□□ -2.69
RPUSD3Q6P087 IGLL4P-201ENST00000614590 133 ntBASIC-1.76□□□□□ -2.69
RPUSD3Q6P087 MIR494-201ENST00000349529 81 ntBASIC-1.77□□□□□ -2.69
RPUSD3Q6P087 RNU6-940P-201ENST00000363433 104 ntBASIC-1.77□□□□□ -2.69
RPUSD3Q6P087 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.77□□□□□ -2.69
RPUSD3Q6P087 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.77□□□□□ -2.69
RPUSD3Q6P087 U6.111-201ENST00000636093 83 ntBASIC-1.77□□□□□ -2.69
RPUSD3Q6P087 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.78□□□□□ -2.69
RPUSD3Q6P087 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.79□□□□□ -2.7
RPUSD3Q6P087 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.79□□□□□ -2.7
RPUSD3Q6P087 MIR509-1-201ENST00000385265 94 ntBASIC-1.79□□□□□ -2.7
RPUSD3Q6P087 MIR509-2-201ENST00000390724 91 ntBASIC-1.79□□□□□ -2.7
RPUSD3Q6P087 AC062037.1-201ENST00000605302 128 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms