Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MIR4719-201ENST00000585233 84 ntBASIC-1□□□□□ -2.57
FOXF1Q12946 U4.2-201ENST00000618561 85 ntBASIC-1□□□□□ -2.57
FOXF1Q12946 RNY4P27-201ENST00000363341 96 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 SNORD60-201ENST00000383903 83 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 RNU6-573P-201ENST00000383938 106 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 RNU6-663P-201ENST00000391105 106 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 AL451105.1-201ENST00000450005 189 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 RNU6-634P-201ENST00000459134 106 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 MIR466-201ENST00000580653 84 ntBASIC-1.01□□□□□ -2.57
FOXF1Q12946 RNU6-834P-201ENST00000362367 110 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 SNORD113-4-201ENST00000364802 75 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 RNU6-590P-201ENST00000365039 107 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 RNU6-313P-201ENST00000516317 112 ntBASIC-1.02□□□□□ -2.57
FOXF1Q12946 RNA5SP93-201ENST00000362525 114 ntBASIC-1.03□□□□□ -2.57
FOXF1Q12946 RNA5SP173-201ENST00000364857 136 ntBASIC-1.03□□□□□ -2.57
FOXF1Q12946 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.03□□□□□ -2.57
FOXF1Q12946 AL606753.1-201ENST00000427435 87 ntBASIC-1.03□□□□□ -2.57
FOXF1Q12946 RNU6-419P-201ENST00000517030 63 ntBASIC-1.03□□□□□ -2.57
FOXF1Q12946 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 RNU6-800P-201ENST00000384473 103 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 RNU6-300P-201ENST00000459080 104 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 MIR5693-201ENST00000577722 73 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 MIR198-201ENST00000637333 62 ntBASIC-1.04□□□□□ -2.58
FOXF1Q12946 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 RNU6-854P-201ENST00000364036 107 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 MIR1255A-201ENST00000408338 113 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 MIR5582-201ENST00000579697 68 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.05□□□□□ -2.58
FOXF1Q12946 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 RNU6-153P-201ENST00000364422 104 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 RNU6-294P-201ENST00000364999 102 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 SNORD113-1-201ENST00000365321 69 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 SNORD30.1-201ENST00000391309 70 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 RNA5SP225-201ENST00000410874 135 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 RNU6-919P-201ENST00000516731 104 ntBASIC-1.06□□□□□ -2.58
FOXF1Q12946 RNU6-230P-201ENST00000362457 104 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 snosnR66.1-201ENST00000391095 99 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 MIR548H4-201ENST00000408689 111 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 RNU6-406P-201ENST00000516470 107 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 MIR3938-201ENST00000582157 103 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 MIR4511-201ENST00000582784 87 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 U7.4-201ENST00000614961 63 ntBASIC-1.07□□□□□ -2.58
FOXF1Q12946 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.08□□□□□ -2.58
FOXF1Q12946 SNORA25.4-201ENST00000363666 124 ntBASIC-1.08□□□□□ -2.58
FOXF1Q12946 MIR450A2-201ENST00000385022 100 ntBASIC-1.08□□□□□ -2.58
FOXF1Q12946 RNU6-380P-201ENST00000410207 107 ntBASIC-1.08□□□□□ -2.58
FOXF1Q12946 U6.111-201ENST00000636093 83 ntBASIC-1.08□□□□□ -2.58
FOXF1Q12946 RNY4P9-201ENST00000363194 97 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 MIR124-1-201ENST00000385275 85 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 SNORD115-45-201ENST00000391078 81 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 MIR548M-201ENST00000408260 86 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 AL731768.1-201ENST00000603124 139 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.09□□□□□ -2.58
FOXF1Q12946 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 SNORD73B-201ENST00000364394 72 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 AC110620.1-201ENST00000416042 228 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 RNU6-857P-201ENST00000515893 110 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.1□□□□□ -2.59
FOXF1Q12946 MIR379-201ENST00000362218 67 ntBASIC-1.11□□□□□ -2.59
FOXF1Q12946 SNORD114-3-201ENST00000364969 75 ntBASIC-1.11□□□□□ -2.59
FOXF1Q12946 RNU6-737P-201ENST00000365370 107 ntBASIC-1.11□□□□□ -2.59
FOXF1Q12946 RNU6-242P-201ENST00000384359 107 ntBASIC-1.11□□□□□ -2.59
FOXF1Q12946 MIR3671-201ENST00000580455 88 ntBASIC-1.11□□□□□ -2.59
FOXF1Q12946 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.12□□□□□ -2.59
FOXF1Q12946 RNU6-788P-201ENST00000390967 104 ntBASIC-1.12□□□□□ -2.59
FOXF1Q12946 MIR548X-201ENST00000580069 75 ntBASIC-1.12□□□□□ -2.59
FOXF1Q12946 MIR548AH-201ENST00000637109 76 ntBASIC-1.12□□□□□ -2.59
FOXF1Q12946 RNA5SP224-201ENST00000365069 126 ntBASIC-1.13□□□□□ -2.59
FOXF1Q12946 MIR545-201ENST00000385085 106 ntBASIC-1.13□□□□□ -2.59
FOXF1Q12946 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.13□□□□□ -2.59
FOXF1Q12946 RNU7-119P-201ENST00000459279 63 ntBASIC-1.13□□□□□ -2.59
FOXF1Q12946 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.14□□□□□ -2.59
FOXF1Q12946 AC139453.2-201ENST00000487255 133 ntBASIC-1.14□□□□□ -2.59
FOXF1Q12946 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 RNU6-940P-201ENST00000363433 104 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 MIR633-201ENST00000384821 98 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 RNY4P29-201ENST00000410801 97 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 RNU6-345P-201ENST00000517001 107 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 U2.22-201ENST00000636441 106 ntBASIC-1.15□□□□□ -2.59
FOXF1Q12946 RNU6-986P-201ENST00000363133 102 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms