Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.04□□□□□ -2.9
HTTP42858 AC069439.1-201ENST00000494739 167 ntBASIC-3.04□□□□□ -2.9
HTTP42858 MIR4679-1-201ENST00000637619 75 ntBASIC-3.04□□□□□ -2.9
HTTP42858 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.04□□□□□ -2.9
HTTP42858 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.05□□□□□ -2.9
HTTP42858 RNY3P1-201ENST00000365085 102 ntBASIC-3.05□□□□□ -2.9
HTTP42858 SNORD42.2-201ENST00000365570 69 ntBASIC-3.05□□□□□ -2.9
HTTP42858 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.05□□□□□ -2.9
HTTP42858 RNU6-620P-201ENST00000384017 96 ntBASIC-3.05□□□□□ -2.9
HTTP42858 RNU6-985P-201ENST00000410182 104 ntBASIC-3.05□□□□□ -2.9
HTTP42858 AC044792.1-201ENST00000593294 196 ntBASIC-3.05□□□□□ -2.9
HTTP42858 MIR494-201ENST00000349529 81 ntBASIC-3.06□□□□□ -2.9
HTTP42858 SNORA25.4-201ENST00000363666 124 ntBASIC-3.06□□□□□ -2.9
HTTP42858 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.06□□□□□ -2.9
HTTP42858 RNU7-171P-201ENST00000459581 62 ntBASIC-3.06□□□□□ -2.9
HTTP42858 RNU6-838P-201ENST00000363399 108 ntBASIC-3.07□□□□□ -2.9
HTTP42858 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.08□□□□□ -2.9
HTTP42858 AL031737.1-201ENST00000450125 223 ntBASIC-3.08□□□□□ -2.9
HTTP42858 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.08□□□□□ -2.9
HTTP42858 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.09□□□□□ -2.9
HTTP42858 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.09□□□□□ -2.9
HTTP42858 MIR4680-201ENST00000580906 66 ntBASIC-3.1□□□□□ -2.91
HTTP42858 MIR3128-201ENST00000581957 66 ntBASIC-3.1□□□□□ -2.91
HTTP42858 MIR620-201ENST00000385232 95 ntBASIC-3.11□□□□□ -2.91
HTTP42858 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.12□□□□□ -2.91
HTTP42858 RNU6-634P-201ENST00000459134 106 ntBASIC-3.12□□□□□ -2.91
HTTP42858 MALAT1.1-201ENST00000618249 95 ntBASIC-3.12□□□□□ -2.91
HTTP42858 MIR1302-1-201ENST00000637932 143 ntBASIC-3.12□□□□□ -2.91
HTTP42858 MIR1245B-201ENST00000636115 69 ntBASIC-3.13□□□□□ -2.91
HTTP42858 AC134503.1-201ENST00000633048 54 ntBASIC-3.14□□□□□ -2.91
HTTP42858 RNU6-111P-201ENST00000517179 105 ntBASIC-3.14□□□□□ -2.91
HTTP42858 RNU6-539P-201ENST00000516665 103 ntBASIC-3.15□□□□□ -2.91
HTTP42858 AL353621.2-201ENST00000605340 133 ntBASIC-3.15□□□□□ -2.91
HTTP42858 IGLL4P-201ENST00000614590 133 ntBASIC-3.15□□□□□ -2.91
HTTP42858 RNU6-829P-201ENST00000363700 112 ntBASIC-3.15□□□□□ -2.91
HTTP42858 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.16□□□□□ -2.92
HTTP42858 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.17□□□□□ -2.92
HTTP42858 RNU6-81P-201ENST00000365608 104 ntBASIC-3.17□□□□□ -2.92
HTTP42858 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.17□□□□□ -2.92
HTTP42858 MTND5P20-201ENST00000448677 143 ntBASIC-3.18□□□□□ -2.92
HTTP42858 SNORD30.1-201ENST00000391309 70 ntBASIC-3.18□□□□□ -2.92
HTTP42858 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.18□□□□□ -2.92
HTTP42858 RNU6-871P-201ENST00000516122 100 ntBASIC-3.19□□□□□ -2.92
HTTP42858 MTND5P41-201ENST00000517498 206 ntBASIC-3.19□□□□□ -2.92
HTTP42858 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.19□□□□□ -2.92
HTTP42858 AC114801.3-201ENST00000510231 177 ntBASIC-3.19□□□□□ -2.92
HTTP42858 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.2□□□□□ -2.92
HTTP42858 MIR569-201ENST00000385228 96 ntBASIC-3.2□□□□□ -2.92
HTTP42858 RNU6-474P-201ENST00000384243 107 ntBASIC-3.2□□□□□ -2.92
HTTP42858 SNORD113-4-201ENST00000364802 75 ntBASIC-3.21□□□□□ -2.92
HTTP42858 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.22□□□□□ -2.92
HTTP42858 RNU6-471P-201ENST00000383944 106 ntBASIC-3.22□□□□□ -2.92
HTTP42858 RNU6-804P-201ENST00000384286 107 ntBASIC-3.22□□□□□ -2.92
HTTP42858 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.22□□□□□ -2.93
HTTP42858 RNU6-446P-201ENST00000362827 106 ntBASIC-3.23□□□□□ -2.93
HTTP42858 MIR3974-201ENST00000637126 96 ntBASIC-3.23□□□□□ -2.93
HTTP42858 MIR4712-201ENST00000583750 82 ntBASIC-3.24□□□□□ -2.93
HTTP42858 RNU6-875P-201ENST00000516488 106 ntBASIC-3.24□□□□□ -2.93
HTTP42858 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.25□□□□□ -2.93
HTTP42858 MIR4666B-201ENST00000578142 81 ntBASIC-3.25□□□□□ -2.93
HTTP42858 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.25□□□□□ -2.93
HTTP42858 MTND4P29-201ENST00000503122 1372 ntBASIC-3.25□□□□□ -2.93
HTTP42858 RNU2-16P-201ENST00000410712 136 ntBASIC-3.26□□□□□ -2.93
HTTP42858 RNU6-153P-201ENST00000364422 104 ntBASIC-3.27□□□□□ -2.93
HTTP42858 MIR548F1-201ENST00000408667 84 ntBASIC-3.27□□□□□ -2.93
HTTP42858 RNU7-120P-201ENST00000459334 63 ntBASIC-3.27□□□□□ -2.93
HTTP42858 RNU6-894P-201ENST00000517094 105 ntBASIC-3.27□□□□□ -2.93
HTTP42858 RNU6-294P-201ENST00000364999 102 ntBASIC-3.28□□□□□ -2.93
HTTP42858 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.28□□□□□ -2.93
HTTP42858 AL117351.2-201ENST00000513571 157 ntBASIC-3.28□□□□□ -2.93
HTTP42858 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.28□□□□□ -2.94
HTTP42858 MIR3171-201ENST00000584270 74 ntBASIC-3.28□□□□□ -2.94
HTTP42858 RNU6-463P-201ENST00000384340 107 ntBASIC-3.29□□□□□ -2.94
HTTP42858 SNORA20.1-201ENST00000364790 130 ntBASIC-3.3□□□□□ -2.94
HTTP42858 MIR5588-201ENST00000581890 63 ntBASIC-3.3□□□□□ -2.94
HTTP42858 MT-TD-201ENST00000387419 68 ntBASIC-3.3□□□□□ -2.94
HTTP42858 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.3□□□□□ -2.94
HTTP42858 RNU6-257P-201ENST00000410238 98 ntBASIC-3.31□□□□□ -2.94
HTTP42858 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.32□□□□□ -2.94
HTTP42858 RNU6-753P-201ENST00000363926 107 ntBASIC-3.32□□□□□ -2.94
HTTP42858 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.32□□□□□ -2.94
HTTP42858 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.32□□□□□ -2.94
HTTP42858 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.33□□□□□ -2.94
HTTP42858 RNU6-242P-201ENST00000384359 107 ntBASIC-3.33□□□□□ -2.94
HTTP42858 RNY4P19-201ENST00000362530 96 ntBASIC-3.33□□□□□ -2.94
HTTP42858 MTATP8P1-201ENST00000467115 207 ntBASIC-3.35□□□□□ -2.95
HTTP42858 RNU6-589P-201ENST00000516485 107 ntBASIC-3.36□□□□□ -2.95
HTTP42858 MIR488-201ENST00000365739 83 ntBASIC-3.37□□□□□ -2.95
HTTP42858 RNU6-49P-201ENST00000384256 107 ntBASIC-3.37□□□□□ -2.95
HTTP42858 RNU6-485P-201ENST00000363475 107 ntBASIC-3.37□□□□□ -2.95
HTTP42858 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.37□□□□□ -2.95
HTTP42858 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.38□□□□□ -2.95
HTTP42858 U6.111-201ENST00000636093 83 ntBASIC-3.38□□□□□ -2.95
HTTP42858 MIR450A1-201ENST00000362262 91 ntBASIC-3.38□□□□□ -2.95
HTTP42858 RNU6-200P-201ENST00000364743 107 ntBASIC-3.38□□□□□ -2.95
HTTP42858 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.39□□□□□ -2.95
HTTP42858 MIR548F3-201ENST00000408509 87 ntBASIC-3.39□□□□□ -2.95
HTTP42858 SNORD111B-201ENST00000408587 80 ntBASIC-3.39□□□□□ -2.95
HTTP42858 AC008267.6-201ENST00000441664 139 ntBASIC-3.4□□□□□ -2.95
HTTP42858 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.4□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms