Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.2□□□□□ -2.76
SIX3O95343 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.21□□□□□ -2.76
SIX3O95343 MIR4666B-201ENST00000578142 81 ntBASIC-2.21□□□□□ -2.76
SIX3O95343 RNY4P10-201ENST00000365571 96 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 snoU13.10-201ENST00000459301 103 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 U7.4-201ENST00000614961 63 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 U2.22-201ENST00000636441 106 ntBASIC-2.22□□□□□ -2.76
SIX3O95343 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.23□□□□□ -2.77
SIX3O95343 RNU6-828P-201ENST00000364876 107 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-649P-201ENST00000384463 107 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR509-1-201ENST00000385265 94 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR509-2-201ENST00000390724 91 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-663P-201ENST00000391105 106 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 RNU6-231P-201ENST00000517122 103 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.24□□□□□ -2.77
SIX3O95343 MIR202-201ENST00000362219 110 ntBASIC-2.25□□□□□ -2.77
SIX3O95343 RNU6-787P-201ENST00000384032 107 ntBASIC-2.25□□□□□ -2.77
SIX3O95343 RNU7-160P-201ENST00000516660 62 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 MIR4748-201ENST00000578076 82 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 MIR466-201ENST00000580653 84 ntBASIC-2.26□□□□□ -2.77
SIX3O95343 SNORD30.1-201ENST00000391309 70 ntBASIC-2.27□□□□□ -2.77
SIX3O95343 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.27□□□□□ -2.77
SIX3O95343 SNORD60-201ENST00000383903 83 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 MIR5582-201ENST00000579697 68 ntBASIC-2.28□□□□□ -2.77
SIX3O95343 RNU6-820P-201ENST00000384273 107 ntBASIC-2.29□□□□□ -2.78
SIX3O95343 RNU6-153P-201ENST00000364422 104 ntBASIC-2.3□□□□□ -2.78
SIX3O95343 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.3□□□□□ -2.78
SIX3O95343 SNORA25.5-201ENST00000363782 126 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 AC062037.1-201ENST00000605302 128 ntBASIC-2.32□□□□□ -2.78
SIX3O95343 RNU6-530P-201ENST00000391180 107 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 RNU6-634P-201ENST00000459134 106 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 FTX_4.1-201ENST00000616291 147 ntBASIC-2.33□□□□□ -2.78
SIX3O95343 SNORD18C-201ENST00000362704 69 ntBASIC-2.34□□□□□ -2.78
SIX3O95343 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.34□□□□□ -2.78
SIX3O95343 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.35□□□□□ -2.79
SIX3O95343 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.35□□□□□ -2.79
SIX3O95343 SNORA40B-201ENST00000385573 128 ntBASIC-2.36□□□□□ -2.79
SIX3O95343 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
SIX3O95343 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 SNORA17.4-201ENST00000391287 132 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 AC097484.2-201ENST00000509147 251 ntBASIC-2.37□□□□□ -2.79
SIX3O95343 SNORA25.4-201ENST00000363666 124 ntBASIC-2.38□□□□□ -2.79
SIX3O95343 MIR581-201ENST00000384895 96 ntBASIC-2.38□□□□□ -2.79
SIX3O95343 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.39□□□□□ -2.79
SIX3O95343 RNU6-573P-201ENST00000383938 106 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 RNU7-119P-201ENST00000459279 63 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 RNU6-122P-201ENST00000516818 107 ntBASIC-2.4□□□□□ -2.79
SIX3O95343 SNORD45.2-201ENST00000363552 72 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.41□□□□□ -2.8
SIX3O95343 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 RNU6-871P-201ENST00000516122 100 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 SNORA40.16-201ENST00000517238 121 ntBASIC-2.43□□□□□ -2.8
SIX3O95343 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.45□□□□□ -2.8
SIX3O95343 MIR1255A-201ENST00000408338 113 ntBASIC-2.45□□□□□ -2.8
SIX3O95343 MIR548N-201ENST00000408742 75 ntBASIC-2.46□□□□□ -2.8
SIX3O95343 RNY4P9-201ENST00000363194 97 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-361P-201ENST00000364454 107 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-141P-201ENST00000410499 105 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 MIR4426-201ENST00000640330 63 ntBASIC-2.47□□□□□ -2.8
SIX3O95343 RNU6-940P-201ENST00000363433 104 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 SNORD73B-201ENST00000364394 72 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 MIR3202-2-201ENST00000635980 79 ntBASIC-2.48□□□□□ -2.81
SIX3O95343 U6.111-201ENST00000636093 83 ntBASIC-2.49□□□□□ -2.81
SIX3O95343 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.5□□□□□ -2.81
SIX3O95343 SNORD113-3-201ENST00000364830 72 ntBASIC-2.5□□□□□ -2.81
SIX3O95343 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 AL451105.1-201ENST00000450005 189 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 RNU6-857P-201ENST00000515893 110 ntBASIC-2.51□□□□□ -2.81
SIX3O95343 RNU6-300P-201ENST00000459080 104 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 MIR3938-201ENST00000582157 103 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 MIR4511-201ENST00000582784 87 ntBASIC-2.52□□□□□ -2.81
SIX3O95343 RNU6-912P-201ENST00000363800 104 ntBASIC-2.53□□□□□ -2.81
SIX3O95343 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 SNORA26.2-201ENST00000390922 122 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 AC103706.3-201ENST00000636297 85 ntBASIC-2.54□□□□□ -2.82
SIX3O95343 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 RNU6-539P-201ENST00000516665 103 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 RNA5SP170-201ENST00000517150 101 ntBASIC-2.55□□□□□ -2.82
SIX3O95343 MIR5693-201ENST00000577722 73 ntBASIC-2.56□□□□□ -2.82
SIX3O95343 MIR4679-1-201ENST00000637619 75 ntBASIC-2.56□□□□□ -2.82
SIX3O95343 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
SIX3O95343 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.57□□□□□ -2.82
SIX3O95343 RNU6-590P-201ENST00000365039 107 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 RNU6-800P-201ENST00000384473 103 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 RNY4P29-201ENST00000410801 97 ntBASIC-2.58□□□□□ -2.82
SIX3O95343 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 RNU6-68P-201ENST00000516576 104 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.59□□□□□ -2.82
SIX3O95343 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.6□□□□□ -2.83
SIX3O95343 MIR379-201ENST00000362218 67 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms