Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.11□□□□□ -3.07
HLA-DRB4X5D2U9 U6.95-201ENST00000636931 70 ntBASIC-4.11□□□□□ -3.07
HLA-DRB4X5D2U9 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.12□□□□□ -3.07
HLA-DRB4X5D2U9 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.12□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-659P-201ENST00000516454 104 ntBASIC-4.12□□□□□ -3.07
HLA-DRB4X5D2U9 MIR1297-201ENST00000637311 77 ntBASIC-4.12□□□□□ -3.07
HLA-DRB4X5D2U9 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.13□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-426P-201ENST00000516464 97 ntBASIC-4.13□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-789P-201ENST00000517105 102 ntBASIC-4.13□□□□□ -3.07
HLA-DRB4X5D2U9 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.14□□□□□ -3.07
HLA-DRB4X5D2U9 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.15□□□□□ -3.07
HLA-DRB4X5D2U9 SNORA63.4-201ENST00000362763 126 ntBASIC-4.15□□□□□ -3.07
HLA-DRB4X5D2U9 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.15□□□□□ -3.07
HLA-DRB4X5D2U9 MIR4668-201ENST00000582284 70 ntBASIC-4.15□□□□□ -3.07
HLA-DRB4X5D2U9 RNU6-822P-201ENST00000362707 106 ntBASIC-4.16□□□□□ -3.08
HLA-DRB4X5D2U9 SNORD45A-201ENST00000384512 84 ntBASIC-4.16□□□□□ -3.08
HLA-DRB4X5D2U9 MIR4484-201ENST00000582855 83 ntBASIC-4.16□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-810P-201ENST00000364001 107 ntBASIC-4.17□□□□□ -3.08
HLA-DRB4X5D2U9 MIR1302-5-201ENST00000408164 150 ntBASIC-4.17□□□□□ -3.08
HLA-DRB4X5D2U9 AL117187.1-201ENST00000555482 181 ntBASIC-4.17□□□□□ -3.08
HLA-DRB4X5D2U9 AC062037.2-201ENST00000610137 73 ntBASIC-4.17□□□□□ -3.08
HLA-DRB4X5D2U9 RNY4P13-201ENST00000384284 96 ntBASIC-4.18□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-804P-201ENST00000384286 107 ntBASIC-4.19□□□□□ -3.08
HLA-DRB4X5D2U9 AC139453.2-201ENST00000487255 133 ntBASIC-4.19□□□□□ -3.08
HLA-DRB4X5D2U9 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.19□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.2□□□□□ -3.08
HLA-DRB4X5D2U9 SNORA40-201ENST00000388090 126 ntBASIC-4.2□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-742P-201ENST00000365289 107 ntBASIC-4.21□□□□□ -3.08
HLA-DRB4X5D2U9 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.21□□□□□ -3.08
HLA-DRB4X5D2U9 MIR7110-201ENST00000612638 86 ntBASIC-4.21□□□□□ -3.08
HLA-DRB4X5D2U9 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 RNA5SP224-201ENST00000365069 126 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 AL451105.1-201ENST00000450005 189 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-109P-201ENST00000516364 107 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 RNU6-184P-201ENST00000516514 107 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 AC062037.1-201ENST00000605302 128 ntBASIC-4.22□□□□□ -3.08
HLA-DRB4X5D2U9 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.23□□□□□ -3.09
HLA-DRB4X5D2U9 RNU6-380P-201ENST00000410207 107 ntBASIC-4.23□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.619-201ENST00000410951 90 ntBASIC-4.23□□□□□ -3.09
HLA-DRB4X5D2U9 SNORD45.2-201ENST00000363552 72 ntBASIC-4.24□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.422-201ENST00000384054 114 ntBASIC-4.25□□□□□ -3.09
HLA-DRB4X5D2U9 SNORD116-21-201ENST00000384507 92 ntBASIC-4.25□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.25□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.25□□□□□ -3.09
HLA-DRB4X5D2U9 SNORD45C-201ENST00000383893 79 ntBASIC-4.26□□□□□ -3.09
HLA-DRB4X5D2U9 AP001318.4-201ENST00000616637 121 ntBASIC-4.26□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.27□□□□□ -3.09
HLA-DRB4X5D2U9 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.27□□□□□ -3.09
HLA-DRB4X5D2U9 MTCYBP6-201ENST00000441810 138 ntBASIC-4.27□□□□□ -3.09
HLA-DRB4X5D2U9 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.29□□□□□ -3.1
HLA-DRB4X5D2U9 MIR548S-201ENST00000581352 82 ntBASIC-4.29□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-92P-201ENST00000605893 104 ntBASIC-4.3□□□□□ -3.1
HLA-DRB4X5D2U9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.3□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 SNORA40B-201ENST00000385573 128 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-788P-201ENST00000390967 104 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 MIR1302-3-201ENST00000408128 138 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-257P-201ENST00000410238 98 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-231P-201ENST00000517122 103 ntBASIC-4.31□□□□□ -3.1
HLA-DRB4X5D2U9 AC004792.1-201ENST00000614523 137 ntBASIC-4.32□□□□□ -3.1
HLA-DRB4X5D2U9 SNORA19-201ENST00000384737 128 ntBASIC-4.33□□□□□ -3.1
HLA-DRB4X5D2U9 MIR548BB-201ENST00000626714 66 ntBASIC-4.33□□□□□ -3.1
HLA-DRB4X5D2U9 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.34□□□□□ -3.1
HLA-DRB4X5D2U9 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.34□□□□□ -3.1
HLA-DRB4X5D2U9 SNORD116-22-201ENST00000384430 92 ntBASIC-4.34□□□□□ -3.1
HLA-DRB4X5D2U9 SNORD116.2-201ENST00000391251 93 ntBASIC-4.34□□□□□ -3.1
HLA-DRB4X5D2U9 RNU6-497P-201ENST00000365316 104 ntBASIC-4.35□□□□□ -3.11
HLA-DRB4X5D2U9 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.35□□□□□ -3.11
HLA-DRB4X5D2U9 AC044792.1-201ENST00000593294 196 ntBASIC-4.35□□□□□ -3.11
HLA-DRB4X5D2U9 MIR664A-201ENST00000626086 82 ntBASIC-4.35□□□□□ -3.11
HLA-DRB4X5D2U9 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.36□□□□□ -3.11
HLA-DRB4X5D2U9 RNU6-219P-201ENST00000364728 107 ntBASIC-4.37□□□□□ -3.11
HLA-DRB4X5D2U9 MTCYBP9-201ENST00000431021 303 ntBASIC-4.37□□□□□ -3.11
HLA-DRB4X5D2U9 RNU6-542P-201ENST00000516405 103 ntBASIC-4.37□□□□□ -3.11
HLA-DRB4X5D2U9 MTND5P41-201ENST00000517498 206 ntBASIC-4.37□□□□□ -3.11
HLA-DRB4X5D2U9 RNU6-895P-201ENST00000384125 103 ntBASIC-4.38□□□□□ -3.11
HLA-DRB4X5D2U9 SNORD116-24-201ENST00000384549 92 ntBASIC-4.38□□□□□ -3.11
HLA-DRB4X5D2U9 SNORA40.16-201ENST00000517238 121 ntBASIC-4.38□□□□□ -3.11
HLA-DRB4X5D2U9 SNORD60.1-201ENST00000362451 73 ntBASIC-4.4□□□□□ -3.11
HLA-DRB4X5D2U9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.4□□□□□ -3.11
HLA-DRB4X5D2U9 MIR548AI-201ENST00000579940 88 ntBASIC-4.4□□□□□ -3.11
HLA-DRB4X5D2U9 AC008737.2-201ENST00000599446 118 ntBASIC-4.4□□□□□ -3.11
HLA-DRB4X5D2U9 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.41□□□□□ -3.12
HLA-DRB4X5D2U9 RNU6-836P-201ENST00000362920 107 ntBASIC-4.42□□□□□ -3.12
HLA-DRB4X5D2U9 RNU6-200P-201ENST00000364743 107 ntBASIC-4.42□□□□□ -3.12
HLA-DRB4X5D2U9 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.42□□□□□ -3.12
HLA-DRB4X5D2U9 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.43□□□□□ -3.12
HLA-DRB4X5D2U9 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.43□□□□□ -3.12
HLA-DRB4X5D2U9 RNU6-267P-201ENST00000516714 103 ntBASIC-4.43□□□□□ -3.12
HLA-DRB4X5D2U9 RNA5SP449-201ENST00000516871 130 ntBASIC-4.43□□□□□ -3.12
HLA-DRB4X5D2U9 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.44□□□□□ -3.12
HLA-DRB4X5D2U9 MIR2052-201ENST00000636055 55 ntBASIC-4.44□□□□□ -3.12
HLA-DRB4X5D2U9 RNU6-422P-201ENST00000384632 107 ntBASIC-4.45□□□□□ -3.12
HLA-DRB4X5D2U9 MIR568-201ENST00000385036 95 ntBASIC-4.46□□□□□ -3.12
HLA-DRB4X5D2U9 MIR154-201ENST00000385243 84 ntBASIC-4.47□□□□□ -3.13
HLA-DRB4X5D2U9 RNU4-85P-201ENST00000364675 123 ntBASIC-4.49□□□□□ -3.13
HLA-DRB4X5D2U9 SNORD115.2-201ENST00000391126 59 ntBASIC-4.49□□□□□ -3.13
HLA-DRB4X5D2U9 RNU6-196P-201ENST00000384315 107 ntBASIC-4.5□□□□□ -3.13
HLA-DRB4X5D2U9 AC006160.2-201ENST00000637708 154 ntBASIC-4.5□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 294.9 ms