Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 AC097484.2-201ENST00000509147 251 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 RNU7-160P-201ENST00000516660 62 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-789P-201ENST00000517105 102 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 MIR466-201ENST00000580653 84 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 FTX_4.1-201ENST00000616291 147 ntBASIC-1.13□□□□□ -2.59
ZCCHC3Q9NUD5 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 SNORD113-3-201ENST00000364830 72 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-828P-201ENST00000364876 107 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-231P-201ENST00000517122 103 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 MIR4712-201ENST00000583750 82 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-92P-201ENST00000605893 104 ntBASIC-1.14□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-834P-201ENST00000362367 110 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-361P-201ENST00000364454 107 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-81P-201ENST00000365608 104 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-979P-201ENST00000383896 107 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 MT-TM-201ENST00000387377 68 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 RNA5SP266-201ENST00000410273 108 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 RNU6-70P-201ENST00000516438 60 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 MIR7110-201ENST00000612638 86 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.15□□□□□ -2.59
ZCCHC3Q9NUD5 SNORD60-201ENST00000383903 83 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-895P-201ENST00000384125 103 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 MIR154-201ENST00000385243 84 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 SNORA17.4-201ENST00000391287 132 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-380P-201ENST00000410207 107 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-542P-201ENST00000516405 103 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-687P-201ENST00000516443 89 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 MIR3134-201ENST00000579433 74 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 MIR5588-201ENST00000581890 63 ntBASIC-1.16□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.17□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-141P-201ENST00000410499 105 ntBASIC-1.17□□□□□ -2.6
ZCCHC3Q9NUD5 SNORA40.16-201ENST00000517238 121 ntBASIC-1.17□□□□□ -2.6
ZCCHC3Q9NUD5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.17□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.18□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-49P-201ENST00000384256 107 ntBASIC-1.18□□□□□ -2.6
ZCCHC3Q9NUD5 MIR601-201ENST00000385256 79 ntBASIC-1.18□□□□□ -2.6
ZCCHC3Q9NUD5 SNORD116.2-201ENST00000391251 93 ntBASIC-1.18□□□□□ -2.6
ZCCHC3Q9NUD5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.18□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-912P-201ENST00000363800 104 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-22P-201ENST00000384355 107 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 SNORA40B-201ENST00000385573 128 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-530P-201ENST00000391180 107 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU7-171P-201ENST00000459581 62 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 MIR1245B-201ENST00000636115 69 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 MIR198-201ENST00000637333 62 ntBASIC-1.19□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.2□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.2□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.2□□□□□ -2.6
ZCCHC3Q9NUD5 MIR4426-201ENST00000640330 63 ntBASIC-1.2□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-32P-201ENST00000383948 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-147P-201ENST00000383983 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-209P-201ENST00000384118 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-13P-201ENST00000384248 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-12P-201ENST00000384604 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-41P-201ENST00000384741 107 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.21□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 MIR496-201ENST00000385226 102 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 SNX3P1X-201ENST00000414887 175 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 AL451105.1-201ENST00000450005 189 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-122P-201ENST00000516818 107 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 IGLL4P-201ENST00000614590 133 ntBASIC-1.22□□□□□ -2.6
ZCCHC3Q9NUD5 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.23□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-787P-201ENST00000384032 107 ntBASIC-1.23□□□□□ -2.61
ZCCHC3Q9NUD5 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.23□□□□□ -2.61
ZCCHC3Q9NUD5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.23□□□□□ -2.61
ZCCHC3Q9NUD5 MIR379-201ENST00000362218 67 ntBASIC-1.24□□□□□ -2.61
ZCCHC3Q9NUD5 RNY4P27-201ENST00000363341 96 ntBASIC-1.24□□□□□ -2.61
ZCCHC3Q9NUD5 SNORA25.5-201ENST00000363782 126 ntBASIC-1.24□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-590P-201ENST00000365039 107 ntBASIC-1.24□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-742P-201ENST00000365289 107 ntBASIC-1.24□□□□□ -2.61
ZCCHC3Q9NUD5 RNY4P9-201ENST00000363194 97 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 MIR1254-1-201ENST00000408257 97 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 RNU6-300P-201ENST00000459080 104 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.25□□□□□ -2.61
ZCCHC3Q9NUD5 U4.2-201ENST00000618561 85 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms