Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNU6-194P-201ENST00000363862 105 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.225-201ENST00000364326 97 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR144-201ENST00000384886 86 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNU6-910P-201ENST00000390844 107 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP86-201ENST00000390869 98 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNU7-134P-201ENST00000458997 64 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP102-201ENST00000516865 106 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 AL512310.8-201ENST00000550183 120 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 AC068338.1-201ENST00000565567 176 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 AL590491.3-201ENST00000610731 82 ntBASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR148A-201ENST00000362215 68 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD114-17-201ENST00000364699 75 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 RNU6-119P-201ENST00000364882 107 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD114-22-201ENST00000365423 72 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 SNX3P1X-201ENST00000414887 175 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 snoU13.19-201ENST00000459148 104 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP180-201ENST00000516181 101 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.678-201ENST00000516408 96 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 RN7SKP88-201ENST00000516847 250 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD59.2-201ENST00000516873 68 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR3937-201ENST00000580135 106 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4645-201ENST00000583158 77 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 7SK.8-201ENST00000612110 250 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 7SK.13-201ENST00000622040 250 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR6767-201ENST00000637302 66 ntBASIC0.45□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP457-201ENST00000363657 124 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP436-201ENST00000516020 115 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR8074-201ENST00000615081 81 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 Z82195.2-201ENST00000612348 18351 ntBASIC0.44□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD33-201ENST00000362761 85 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORA32.1-201ENST00000364514 115 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR19B1-201ENST00000384829 87 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD12-201ENST00000391002 90 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.616-201ENST00000410835 95 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 AC108740.1-201ENST00000498629 225 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR3122-201ENST00000577243 73 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4474-201ENST00000579189 78 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR6502-201ENST00000617296 76 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR6874-201ENST00000635894 71 ntBASIC0.43□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR365A-201ENST00000362260 87 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP295-201ENST00000362655 121 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD18.1-201ENST00000363807 70 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD74.6-201ENST00000364796 70 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.514-201ENST00000384528 112 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.543-201ENST00000384649 107 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR8485-201ENST00000401372 91 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD75.1-201ENST00000408373 60 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 RPS29P23-201ENST00000458635 123 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 snoU13.9-201ENST00000458927 103 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP309-201ENST00000516670 106 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4441-201ENST00000582623 100 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR3660-201ENST00000584845 100 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR6840-201ENST00000611937 71 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR1246-201ENST00000636535 73 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4320-201ENST00000636981 65 ntBASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.42□□□□□ -2.34
KRTAP4-3Q9BYR4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR409-201ENST00000362237 79 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP62-201ENST00000363457 110 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.501-201ENST00000384467 103 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 Y_RNA.502-201ENST00000384478 113 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 FABP5P4-201ENST00000437203 171 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD22.1-201ENST00000516331 125 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORD38.3-201ENST00000516599 73 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORA31.25-201ENST00000517242 134 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4529-201ENST00000578110 78 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR4280-201ENST00000582178 76 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 RN7SL793P-201ENST00000583259 296 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 MIR6851-201ENST00000617060 67 ntBASIC0.41□□□□□ -2.34
KRTAP4-3Q9BYR4 RNA5SP393-201ENST00000363423 117 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 Y_RNA.232-201ENST00000364369 96 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP128-201ENST00000365305 116 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR146A-201ENST00000385201 99 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 RNU6-400P-201ENST00000391173 106 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR1285-2-201ENST00000408311 88 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 ACA64.5-201ENST00000516207 127 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORA70.22-201ENST00000517160 124 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR6078-201ENST00000611069 100 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
KRTAP4-3Q9BYR4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP257-201ENST00000363023 116 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 RNU6-164P-201ENST00000364604 103 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR524-201ENST00000385242 87 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms