Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 AP002795.1-201ENST00000534879 84 ntBASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 MIR3115-201ENST00000577915 68 ntBASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 MIR4490-201ENST00000582647 84 ntBASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.41□□□□□ -2.64
TRAIPQ9BWF2 SNORD60.1-201ENST00000362451 73 ntBASIC-1.42□□□□□ -2.64
TRAIPQ9BWF2 SNORD19-201ENST00000391191 68 ntBASIC-1.42□□□□□ -2.64
TRAIPQ9BWF2 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
TRAIPQ9BWF2 MIR548AA1-201ENST00000384971 97 ntBASIC-1.43□□□□□ -2.64
TRAIPQ9BWF2 RNU6-576P-201ENST00000390854 102 ntBASIC-1.44□□□□□ -2.64
TRAIPQ9BWF2 RNU6-995P-201ENST00000391244 107 ntBASIC-1.44□□□□□ -2.64
TRAIPQ9BWF2 MIR5683-201ENST00000636514 76 ntBASIC-1.45□□□□□ -2.64
TRAIPQ9BWF2 RNU6-940P-201ENST00000363433 104 ntBASIC-1.46□□□□□ -2.64
TRAIPQ9BWF2 U2.18-201ENST00000622185 84 ntBASIC-1.46□□□□□ -2.64
TRAIPQ9BWF2 SNORD1B-201ENST00000363091 84 ntBASIC-1.48□□□□□ -2.65
TRAIPQ9BWF2 MIR4723-201ENST00000585070 81 ntBASIC-1.48□□□□□ -2.65
TRAIPQ9BWF2 MIR8485-201ENST00000401372 91 ntBASIC-1.49□□□□□ -2.65
TRAIPQ9BWF2 RNU6-122P-201ENST00000516818 107 ntBASIC-1.49□□□□□ -2.65
TRAIPQ9BWF2 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.5□□□□□ -2.65
TRAIPQ9BWF2 RPL35AP4-201ENST00000412007 102 ntBASIC-1.5□□□□□ -2.65
TRAIPQ9BWF2 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.5□□□□□ -2.65
TRAIPQ9BWF2 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.5□□□□□ -2.65
TRAIPQ9BWF2 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.5□□□□□ -2.65
TRAIPQ9BWF2 RNU6-172P-201ENST00000411000 93 ntBASIC-1.51□□□□□ -2.65
TRAIPQ9BWF2 U4.2-201ENST00000618561 85 ntBASIC-1.51□□□□□ -2.65
TRAIPQ9BWF2 RNU6-164P-201ENST00000364604 103 ntBASIC-1.52□□□□□ -2.65
TRAIPQ9BWF2 RNA5SP461-201ENST00000516451 104 ntBASIC-1.52□□□□□ -2.65
TRAIPQ9BWF2 AC091912.2-201ENST00000624798 167 ntBASIC-1.52□□□□□ -2.65
TRAIPQ9BWF2 RNA5SP180-201ENST00000516181 101 ntBASIC-1.54□□□□□ -2.66
TRAIPQ9BWF2 RNU6-471P-201ENST00000383944 106 ntBASIC-1.55□□□□□ -2.66
TRAIPQ9BWF2 AC090616.4-201ENST00000448026 115 ntBASIC-1.55□□□□□ -2.66
TRAIPQ9BWF2 MIR6874-201ENST00000635894 71 ntBASIC-1.55□□□□□ -2.66
TRAIPQ9BWF2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.56□□□□□ -2.66
TRAIPQ9BWF2 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.56□□□□□ -2.66
TRAIPQ9BWF2 HLA-S-202ENST00000425174 53 ntBASIC-1.56□□□□□ -2.66
TRAIPQ9BWF2 MIR365A-201ENST00000362260 87 ntBASIC-1.58□□□□□ -2.66
TRAIPQ9BWF2 MIR5591-201ENST00000578248 65 ntBASIC-1.58□□□□□ -2.66
TRAIPQ9BWF2 MIR4770-201ENST00000579149 58 ntBASIC-1.58□□□□□ -2.66
TRAIPQ9BWF2 MIR7110-201ENST00000612638 86 ntBASIC-1.58□□□□□ -2.66
TRAIPQ9BWF2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.58□□□□□ -2.66
TRAIPQ9BWF2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.59□□□□□ -2.66
TRAIPQ9BWF2 RNU7-119P-201ENST00000459279 63 ntBASIC-1.6□□□□□ -2.67
TRAIPQ9BWF2 RNU6-247P-201ENST00000362636 107 ntBASIC-1.61□□□□□ -2.67
TRAIPQ9BWF2 MIR1285-2-201ENST00000408311 88 ntBASIC-1.61□□□□□ -2.67
TRAIPQ9BWF2 MIR4441-201ENST00000582623 100 ntBASIC-1.61□□□□□ -2.67
TRAIPQ9BWF2 SNORD114-3-201ENST00000364969 75 ntBASIC-1.62□□□□□ -2.67
TRAIPQ9BWF2 MIR6502-201ENST00000617296 76 ntBASIC-1.62□□□□□ -2.67
TRAIPQ9BWF2 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.63□□□□□ -2.67
TRAIPQ9BWF2 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.63□□□□□ -2.67
TRAIPQ9BWF2 RNU7-151P-201ENST00000516930 53 ntBASIC-1.63□□□□□ -2.67
TRAIPQ9BWF2 RNU6-231P-201ENST00000517122 103 ntBASIC-1.63□□□□□ -2.67
TRAIPQ9BWF2 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.64□□□□□ -2.67
TRAIPQ9BWF2 MIR466-201ENST00000580653 84 ntBASIC-1.64□□□□□ -2.67
TRAIPQ9BWF2 MIR4520-1-201ENST00000582609 70 ntBASIC-1.64□□□□□ -2.67
TRAIPQ9BWF2 RNU6-590P-201ENST00000365039 107 ntBASIC-1.65□□□□□ -2.67
TRAIPQ9BWF2 AC110620.1-201ENST00000416042 228 ntBASIC-1.65□□□□□ -2.67
TRAIPQ9BWF2 RNU6-608P-201ENST00000383927 104 ntBASIC-1.66□□□□□ -2.68
TRAIPQ9BWF2 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.68
TRAIPQ9BWF2 MIR579-201ENST00000385221 98 ntBASIC-1.66□□□□□ -2.68
TRAIPQ9BWF2 SNORD116.2-201ENST00000391251 93 ntBASIC-1.66□□□□□ -2.68
TRAIPQ9BWF2 MIR1207-201ENST00000408249 87 ntBASIC-1.67□□□□□ -2.68
TRAIPQ9BWF2 AC018880.2-201ENST00000414265 201 ntBASIC-1.67□□□□□ -2.68
TRAIPQ9BWF2 AC125388.1-201ENST00000459631 156 ntBASIC-1.68□□□□□ -2.68
TRAIPQ9BWF2 MIR3938-201ENST00000582157 103 ntBASIC-1.69□□□□□ -2.68
TRAIPQ9BWF2 MIR3170-201ENST00000582699 77 ntBASIC-1.7□□□□□ -2.68
TRAIPQ9BWF2 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.72□□□□□ -2.68
TRAIPQ9BWF2 RNU7-160P-201ENST00000516660 62 ntBASIC-1.72□□□□□ -2.68
TRAIPQ9BWF2 RNU6-79P-201ENST00000362511 107 ntBASIC-1.74□□□□□ -2.69
TRAIPQ9BWF2 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.74□□□□□ -2.69
TRAIPQ9BWF2 RNU6-400P-201ENST00000391173 106 ntBASIC-1.75□□□□□ -2.69
TRAIPQ9BWF2 RNU6-669P-201ENST00000365575 107 ntBASIC-1.76□□□□□ -2.69
TRAIPQ9BWF2 RNU6-520P-201ENST00000384717 104 ntBASIC-1.76□□□□□ -2.69
TRAIPQ9BWF2 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.76□□□□□ -2.69
TRAIPQ9BWF2 RNA5SP86-201ENST00000390869 98 ntBASIC-1.77□□□□□ -2.69
TRAIPQ9BWF2 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.77□□□□□ -2.69
TRAIPQ9BWF2 RNU6-226P-201ENST00000363778 107 ntBASIC-1.78□□□□□ -2.69
TRAIPQ9BWF2 RNU6-810P-201ENST00000364001 107 ntBASIC-1.79□□□□□ -2.7
TRAIPQ9BWF2 MIR7978-201ENST00000636158 59 ntBASIC-1.79□□□□□ -2.7
TRAIPQ9BWF2 MIR548H1-201ENST00000408610 102 ntBASIC-1.8□□□□□ -2.7
TRAIPQ9BWF2 MIR23C-201ENST00000579846 100 ntBASIC-1.8□□□□□ -2.7
TRAIPQ9BWF2 RNY4P27-201ENST00000363341 96 ntBASIC-1.81□□□□□ -2.7
TRAIPQ9BWF2 RNU6-258P-201ENST00000390884 101 ntBASIC-1.81□□□□□ -2.7
TRAIPQ9BWF2 MIR1246-201ENST00000636535 73 ntBASIC-1.82□□□□□ -2.7
TRAIPQ9BWF2 SNORA40B-201ENST00000385573 128 ntBASIC-1.83□□□□□ -2.7
TRAIPQ9BWF2 AC120024.2-201ENST00000576526 175 ntBASIC-1.83□□□□□ -2.7
TRAIPQ9BWF2 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.84□□□□□ -2.7
TRAIPQ9BWF2 RNU6-563P-201ENST00000364872 108 ntBASIC-1.84□□□□□ -2.7
TRAIPQ9BWF2 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.84□□□□□ -2.7
TRAIPQ9BWF2 SNORD63.2-201ENST00000516303 64 ntBASIC-1.84□□□□□ -2.7
TRAIPQ9BWF2 RNU6-828P-201ENST00000364876 107 ntBASIC-1.85□□□□□ -2.71
TRAIPQ9BWF2 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.87□□□□□ -2.71
TRAIPQ9BWF2 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.88□□□□□ -2.71
TRAIPQ9BWF2 MIR125B1-201ENST00000385236 88 ntBASIC-1.89□□□□□ -2.71
TRAIPQ9BWF2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.89□□□□□ -2.71
TRAIPQ9BWF2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.9□□□□□ -2.71
TRAIPQ9BWF2 SNORD18.1-201ENST00000363807 70 ntBASIC-1.9□□□□□ -2.71
TRAIPQ9BWF2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.9□□□□□ -2.71
TRAIPQ9BWF2 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.91□□□□□ -2.72
TRAIPQ9BWF2 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms