Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU6-12P-201ENST00000384604 107 ntBASIC-2.12□□□□□ -2.75
VPS35Q96QK1 RNU6-41P-201ENST00000384741 107 ntBASIC-2.12□□□□□ -2.75
VPS35Q96QK1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.12□□□□□ -2.75
VPS35Q96QK1 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.13□□□□□ -2.75
VPS35Q96QK1 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.13□□□□□ -2.75
VPS35Q96QK1 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.13□□□□□ -2.75
VPS35Q96QK1 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.14□□□□□ -2.75
VPS35Q96QK1 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.14□□□□□ -2.75
VPS35Q96QK1 snoU13.10-201ENST00000459301 103 ntBASIC-2.14□□□□□ -2.75
VPS35Q96QK1 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.15□□□□□ -2.75
VPS35Q96QK1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.15□□□□□ -2.75
VPS35Q96QK1 MIR581-201ENST00000384895 96 ntBASIC-2.16□□□□□ -2.76
VPS35Q96QK1 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 RNU6-979P-201ENST00000383896 107 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 RNU7-160P-201ENST00000516660 62 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 RNU6-789P-201ENST00000517105 102 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 MIR548AI-201ENST00000579940 88 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 MIR3910-1-201ENST00000580936 111 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 MIR5588-201ENST00000581890 63 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.17□□□□□ -2.76
VPS35Q96QK1 SNORD18C-201ENST00000362704 69 ntBASIC-2.18□□□□□ -2.76
VPS35Q96QK1 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.18□□□□□ -2.76
VPS35Q96QK1 MIR4712-201ENST00000583750 82 ntBASIC-2.18□□□□□ -2.76
VPS35Q96QK1 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.18□□□□□ -2.76
VPS35Q96QK1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
VPS35Q96QK1 RNU6-70P-201ENST00000516438 60 ntBASIC-2.19□□□□□ -2.76
VPS35Q96QK1 RNU6-92P-201ENST00000605893 104 ntBASIC-2.19□□□□□ -2.76
VPS35Q96QK1 RNU6-895P-201ENST00000384125 103 ntBASIC-2.2□□□□□ -2.76
VPS35Q96QK1 MIR154-201ENST00000385243 84 ntBASIC-2.2□□□□□ -2.76
VPS35Q96QK1 RNU6-542P-201ENST00000516405 103 ntBASIC-2.2□□□□□ -2.76
VPS35Q96QK1 RNA5SP405-201ENST00000363059 114 ntBASIC-2.21□□□□□ -2.76
VPS35Q96QK1 RNU6-520P-201ENST00000384717 104 ntBASIC-2.21□□□□□ -2.76
VPS35Q96QK1 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.21□□□□□ -2.76
VPS35Q96QK1 SNORD60.1-201ENST00000362451 73 ntBASIC-2.22□□□□□ -2.76
VPS35Q96QK1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.22□□□□□ -2.76
VPS35Q96QK1 RNU6-147P-201ENST00000383983 107 ntBASIC-2.22□□□□□ -2.76
VPS35Q96QK1 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.22□□□□□ -2.76
VPS35Q96QK1 RNU6-828P-201ENST00000364876 107 ntBASIC-2.23□□□□□ -2.77
VPS35Q96QK1 MIR548N-201ENST00000408742 75 ntBASIC-2.23□□□□□ -2.77
VPS35Q96QK1 RNU7-171P-201ENST00000459581 62 ntBASIC-2.23□□□□□ -2.77
VPS35Q96QK1 MIR1245B-201ENST00000636115 69 ntBASIC-2.23□□□□□ -2.77
VPS35Q96QK1 MIR202-201ENST00000362219 110 ntBASIC-2.24□□□□□ -2.77
VPS35Q96QK1 RNU6-49P-201ENST00000384256 107 ntBASIC-2.24□□□□□ -2.77
VPS35Q96QK1 RNU6-687P-201ENST00000516443 89 ntBASIC-2.24□□□□□ -2.77
VPS35Q96QK1 MIR3134-201ENST00000579433 74 ntBASIC-2.24□□□□□ -2.77
VPS35Q96QK1 MIR7110-201ENST00000612638 86 ntBASIC-2.24□□□□□ -2.77
VPS35Q96QK1 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 RNU6-810P-201ENST00000364001 107 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 RNY1P1-201ENST00000364372 112 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 SNORD113-1-201ENST00000365321 69 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 RNU6-231P-201ENST00000517122 103 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 IGLL4P-201ENST00000614590 133 ntBASIC-2.25□□□□□ -2.77
VPS35Q96QK1 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.26□□□□□ -2.77
VPS35Q96QK1 SNORD60-201ENST00000383903 83 ntBASIC-2.27□□□□□ -2.77
VPS35Q96QK1 RNU6-649P-201ENST00000384463 107 ntBASIC-2.27□□□□□ -2.77
VPS35Q96QK1 RNU6-194P-201ENST00000363862 105 ntBASIC-2.28□□□□□ -2.77
VPS35Q96QK1 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.28□□□□□ -2.77
VPS35Q96QK1 RNU6-118P-201ENST00000516552 102 ntBASIC-2.28□□□□□ -2.77
VPS35Q96QK1 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.28□□□□□ -2.77
VPS35Q96QK1 MIR4748-201ENST00000578076 82 ntBASIC-2.28□□□□□ -2.77
VPS35Q96QK1 RNU6-361P-201ENST00000364454 107 ntBASIC-2.29□□□□□ -2.78
VPS35Q96QK1 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.29□□□□□ -2.78
VPS35Q96QK1 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.3□□□□□ -2.78
VPS35Q96QK1 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.3□□□□□ -2.78
VPS35Q96QK1 AC097484.2-201ENST00000509147 251 ntBASIC-2.3□□□□□ -2.78
VPS35Q96QK1 SNORA17.4-201ENST00000391287 132 ntBASIC-2.31□□□□□ -2.78
VPS35Q96QK1 MIR466-201ENST00000580653 84 ntBASIC-2.31□□□□□ -2.78
VPS35Q96QK1 SNORA40B-201ENST00000385573 128 ntBASIC-2.32□□□□□ -2.78
VPS35Q96QK1 FTX_4.1-201ENST00000616291 147 ntBASIC-2.32□□□□□ -2.78
VPS35Q96QK1 RNU6-215P-201ENST00000365169 102 ntBASIC-2.33□□□□□ -2.78
VPS35Q96QK1 SNORD116.2-201ENST00000391251 93 ntBASIC-2.33□□□□□ -2.78
VPS35Q96QK1 RNU6-919P-201ENST00000516731 104 ntBASIC-2.33□□□□□ -2.78
VPS35Q96QK1 RNU6-68P-201ENST00000516576 104 ntBASIC-2.34□□□□□ -2.78
VPS35Q96QK1 SNORA40.16-201ENST00000517238 121 ntBASIC-2.34□□□□□ -2.78
VPS35Q96QK1 RNU6-119P-201ENST00000364882 107 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.35□□□□□ -2.79
VPS35Q96QK1 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.36□□□□□ -2.79
VPS35Q96QK1 SNORD20-201ENST00000384550 80 ntBASIC-2.36□□□□□ -2.79
VPS35Q96QK1 AL606753.1-201ENST00000427435 87 ntBASIC-2.37□□□□□ -2.79
VPS35Q96QK1 RNU6-122P-201ENST00000516818 107 ntBASIC-2.37□□□□□ -2.79
VPS35Q96QK1 MIR4666B-201ENST00000578142 81 ntBASIC-2.37□□□□□ -2.79
VPS35Q96QK1 MIR3139-201ENST00000579145 76 ntBASIC-2.37□□□□□ -2.79
VPS35Q96QK1 RNU6-411P-201ENST00000384451 107 ntBASIC-2.38□□□□□ -2.79
VPS35Q96QK1 RNU6-530P-201ENST00000391180 107 ntBASIC-2.38□□□□□ -2.79
VPS35Q96QK1 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.39□□□□□ -2.79
VPS35Q96QK1 SNORD113-3-201ENST00000364830 72 ntBASIC-2.4□□□□□ -2.79
VPS35Q96QK1 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.4□□□□□ -2.79
VPS35Q96QK1 RNU6-787P-201ENST00000384032 107 ntBASIC-2.4□□□□□ -2.79
VPS35Q96QK1 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.4□□□□□ -2.79
VPS35Q96QK1 RNA5SP89-201ENST00000410300 108 ntBASIC-2.4□□□□□ -2.79
VPS35Q96QK1 SNORA25.5-201ENST00000363782 126 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 282.9 ms