Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SNORA25.4-201ENST00000363666 124 ntBASIC-1.16□□□□□ -2.6
BEST3Q8N1M1 MIR4770-201ENST00000579149 58 ntBASIC-1.16□□□□□ -2.6
BEST3Q8N1M1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.16□□□□□ -2.6
BEST3Q8N1M1 RNA5SP331-201ENST00000364986 107 ntBASIC-1.17□□□□□ -2.6
BEST3Q8N1M1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.17□□□□□ -2.6
BEST3Q8N1M1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
BEST3Q8N1M1 U2.18-201ENST00000622185 84 ntBASIC-1.17□□□□□ -2.6
BEST3Q8N1M1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.18□□□□□ -2.6
BEST3Q8N1M1 MIR520D-201ENST00000385002 87 ntBASIC-1.18□□□□□ -2.6
BEST3Q8N1M1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.18□□□□□ -2.6
BEST3Q8N1M1 RNU6-776P-201ENST00000364403 104 ntBASIC-1.19□□□□□ -2.6
BEST3Q8N1M1 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.19□□□□□ -2.6
BEST3Q8N1M1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.19□□□□□ -2.6
BEST3Q8N1M1 RNU6-539P-201ENST00000516665 103 ntBASIC-1.19□□□□□ -2.6
BEST3Q8N1M1 SNORD1B-201ENST00000363091 84 ntBASIC-1.2□□□□□ -2.6
BEST3Q8N1M1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.2□□□□□ -2.6
BEST3Q8N1M1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.2□□□□□ -2.6
BEST3Q8N1M1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.2□□□□□ -2.6
BEST3Q8N1M1 SNORA72.7-201ENST00000516349 94 ntBASIC-1.21□□□□□ -2.6
BEST3Q8N1M1 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.22□□□□□ -2.6
BEST3Q8N1M1 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.6
BEST3Q8N1M1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.22□□□□□ -2.6
BEST3Q8N1M1 U6.111-201ENST00000636093 83 ntBASIC-1.22□□□□□ -2.6
BEST3Q8N1M1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.23□□□□□ -2.61
BEST3Q8N1M1 MIR1246-201ENST00000636535 73 ntBASIC-1.24□□□□□ -2.61
BEST3Q8N1M1 SNORD60.1-201ENST00000362451 73 ntBASIC-1.25□□□□□ -2.61
BEST3Q8N1M1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.25□□□□□ -2.61
BEST3Q8N1M1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.25□□□□□ -2.61
BEST3Q8N1M1 AC005520.4-201ENST00000604337 90 ntBASIC-1.25□□□□□ -2.61
BEST3Q8N1M1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.25□□□□□ -2.61
BEST3Q8N1M1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.26□□□□□ -2.61
BEST3Q8N1M1 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.26□□□□□ -2.61
BEST3Q8N1M1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.26□□□□□ -2.61
BEST3Q8N1M1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.26□□□□□ -2.61
BEST3Q8N1M1 SNORA25.5-201ENST00000363782 126 ntBASIC-1.27□□□□□ -2.61
BEST3Q8N1M1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.27□□□□□ -2.61
BEST3Q8N1M1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.27□□□□□ -2.61
BEST3Q8N1M1 AC018880.2-201ENST00000414265 201 ntBASIC-1.27□□□□□ -2.61
BEST3Q8N1M1 AC103706.3-201ENST00000636297 85 ntBASIC-1.27□□□□□ -2.61
BEST3Q8N1M1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.28□□□□□ -2.61
BEST3Q8N1M1 MIR4756-201ENST00000577874 78 ntBASIC-1.28□□□□□ -2.61
BEST3Q8N1M1 MIR3170-201ENST00000582699 77 ntBASIC-1.28□□□□□ -2.61
BEST3Q8N1M1 MIR4511-201ENST00000582784 87 ntBASIC-1.28□□□□□ -2.61
BEST3Q8N1M1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.29□□□□□ -2.62
BEST3Q8N1M1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.29□□□□□ -2.62
BEST3Q8N1M1 AC108019.1-201ENST00000512540 175 ntBASIC-1.29□□□□□ -2.62
BEST3Q8N1M1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.29□□□□□ -2.62
BEST3Q8N1M1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.3□□□□□ -2.62
BEST3Q8N1M1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.3□□□□□ -2.62
BEST3Q8N1M1 RNU6-122P-201ENST00000516818 107 ntBASIC-1.31□□□□□ -2.62
BEST3Q8N1M1 RNU6-800P-201ENST00000384473 103 ntBASIC-1.32□□□□□ -2.62
BEST3Q8N1M1 MIR601-201ENST00000385256 79 ntBASIC-1.32□□□□□ -2.62
BEST3Q8N1M1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.32□□□□□ -2.62
BEST3Q8N1M1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.33□□□□□ -2.62
BEST3Q8N1M1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.33□□□□□ -2.62
BEST3Q8N1M1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
BEST3Q8N1M1 MIR1468-201ENST00000410600 86 ntBASIC-1.33□□□□□ -2.62
BEST3Q8N1M1 AC120024.2-201ENST00000576526 175 ntBASIC-1.33□□□□□ -2.62
BEST3Q8N1M1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.34□□□□□ -2.62
BEST3Q8N1M1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.34□□□□□ -2.62
BEST3Q8N1M1 MIR3123-201ENST00000583417 75 ntBASIC-1.34□□□□□ -2.62
BEST3Q8N1M1 MIR7110-201ENST00000612638 86 ntBASIC-1.34□□□□□ -2.62
BEST3Q8N1M1 MIR198-201ENST00000637333 62 ntBASIC-1.34□□□□□ -2.62
BEST3Q8N1M1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.35□□□□□ -2.63
BEST3Q8N1M1 MIR579-201ENST00000385221 98 ntBASIC-1.35□□□□□ -2.63
BEST3Q8N1M1 MIR23C-201ENST00000579846 100 ntBASIC-1.35□□□□□ -2.63
BEST3Q8N1M1 RNU6-940P-201ENST00000363433 104 ntBASIC-1.36□□□□□ -2.63
BEST3Q8N1M1 RNU6-231P-201ENST00000517122 103 ntBASIC-1.36□□□□□ -2.63
BEST3Q8N1M1 MIR7978-201ENST00000636158 59 ntBASIC-1.36□□□□□ -2.63
BEST3Q8N1M1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.37□□□□□ -2.63
BEST3Q8N1M1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.37□□□□□ -2.63
BEST3Q8N1M1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.37□□□□□ -2.63
BEST3Q8N1M1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.38□□□□□ -2.63
BEST3Q8N1M1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.38□□□□□ -2.63
BEST3Q8N1M1 AC013734.1-201ENST00000619329 111 ntBASIC-1.38□□□□□ -2.63
BEST3Q8N1M1 MIR548AM-201ENST00000584298 74 ntBASIC-1.39□□□□□ -2.63
BEST3Q8N1M1 MIR125B1-201ENST00000385236 88 ntBASIC-1.4□□□□□ -2.63
BEST3Q8N1M1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.4□□□□□ -2.63
BEST3Q8N1M1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.4□□□□□ -2.63
BEST3Q8N1M1 MIR664B-201ENST00000626756 61 ntBASIC-1.4□□□□□ -2.63
BEST3Q8N1M1 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.41□□□□□ -2.64
BEST3Q8N1M1 RNU7-119P-201ENST00000459279 63 ntBASIC-1.41□□□□□ -2.64
BEST3Q8N1M1 AC114801.3-201ENST00000510231 177 ntBASIC-1.41□□□□□ -2.64
BEST3Q8N1M1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.41□□□□□ -2.64
BEST3Q8N1M1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 SNORD116.2-201ENST00000391251 93 ntBASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.42□□□□□ -2.64
BEST3Q8N1M1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.43□□□□□ -2.64
BEST3Q8N1M1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.43□□□□□ -2.64
BEST3Q8N1M1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.43□□□□□ -2.64
BEST3Q8N1M1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.43□□□□□ -2.64
BEST3Q8N1M1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.44□□□□□ -2.64
BEST3Q8N1M1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.44□□□□□ -2.64
BEST3Q8N1M1 MIR548W-201ENST00000581970 74 ntBASIC-1.44□□□□□ -2.64
BEST3Q8N1M1 MIR365A-201ENST00000362260 87 ntBASIC-1.45□□□□□ -2.64
BEST3Q8N1M1 RNU6-810P-201ENST00000364001 107 ntBASIC-1.45□□□□□ -2.64
BEST3Q8N1M1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms